RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 RGS22Q8NE09 1264 aa8.01□□□□□ -1.13
TOPBP1-203ENST00000503464 TRIM34Q9BYJ4 488 aa8.01□□□□□ -1.13
TOPBP1-203ENST00000503464 GLIS2Q9BZE0 524 aaPredicted RBP8.01□□□□□ -1.13
TOPBP1-203ENST00000503464 DEFB129Q9H1M3 183 aa8.01□□□□□ -1.13
TOPBP1-203ENST00000503464 KANSL2Q9H9L4 492 aa8.01□□□□□ -1.13
TOPBP1-203ENST00000503464 GDPD2Q9HCC8 539 aa8.01□□□□□ -1.13
TOPBP1-203ENST00000503464 NYAP2Q9P242 653 aa8.01□□□□□ -1.13
TOPBP1-203ENST00000503464 MTMR7Q9Y216 660 aa8.01□□□□□ -1.13
TOPBP1-203ENST00000503464 V9GY48 417 aaPredicted RBP8.01□□□□□ -1.13
TOPBP1-203ENST00000503464 SMCHD1A6NHR9 2005 aa8.01□□□□□ -1.13
TOPBP1-203ENST00000503464 RLFQ13129 1914 aa8.01□□□□□ -1.13
TOPBP1-203ENST00000503464 FRMPD2Q68DX3 1309 aaPredicted RBP8.01□□□□□ -1.13
TOPBP1-203ENST00000503464 ZC3H4Q9UPT8 1303 aaKnown RBP8.01□□□□□ -1.13
TOPBP1-203ENST00000503464 KLRF2D3W0D1 207 aa8□□□□□ -1.13
TOPBP1-203ENST00000503464 H3BQV1 296 aa8□□□□□ -1.13
TOPBP1-203ENST00000503464 PDIA4P13667 645 aaKnown RBP8□□□□□ -1.13
TOPBP1-203ENST00000503464 KIF5BP33176 963 aa8□□□□□ -1.13
TOPBP1-203ENST00000503464 CAP2P40123 477 aa8□□□□□ -1.13
TOPBP1-203ENST00000503464 ECE1P42892 770 aa8□□□□□ -1.13
TOPBP1-203ENST00000503464 ZNF543Q08ER8 600 aa8□□□□□ -1.13
TOPBP1-203ENST00000503464 TNFAIP1Q13829 316 aa8□□□□□ -1.13
TOPBP1-203ENST00000503464 PFKFB3Q16875 520 aaPredicted RBP8□□□□□ -1.13
TOPBP1-203ENST00000503464 IFFO2Q5TF58 517 aa8□□□□□ -1.13
TOPBP1-203ENST00000503464 TTBK2Q6IQ55 1244 aa8□□□□□ -1.13
TOPBP1-203ENST00000503464 APOBEC3FQ8IUX4 373 aaKnown RBP8□□□□□ -1.13
TOPBP1-203ENST00000503464 TRIM22Q8IYM9 498 aa8□□□□□ -1.13
TOPBP1-203ENST00000503464 ACER1Q8TDN7 264 aa8□□□□□ -1.13
TOPBP1-203ENST00000503464 OXER1Q8TDS5 423 aa8□□□□□ -1.13
TOPBP1-203ENST00000503464 SPZ1Q9BXG8 430 aa8□□□□□ -1.13
TOPBP1-203ENST00000503464 FTOQ9C0B1 505 aaKnown RBP eCLIP8□□□□□ -1.13
TOPBP1-203ENST00000503464 ADARB2Q9NS39 739 aaKnown RBP8□□□□□ -1.13
TOPBP1-203ENST00000503464 VPS54Q9P1Q0 977 aa8□□□□□ -1.13
TOPBP1-203ENST00000503464 KCNJ14Q9UNX9 436 aa8□□□□□ -1.13
TOPBP1-203ENST00000503464 FZD1Q9UP38 647 aa8□□□□□ -1.13
TOPBP1-203ENST00000503464 KIF3AQ9Y496 699 aa8□□□□□ -1.13
TOPBP1-203ENST00000503464 PITPNM2Q9BZ72 1349 aa8□□□□□ -1.13
TOPBP1-203ENST00000503464 GLTPD2A6NH11 291 aa7.99□□□□□ -1.13
TOPBP1-203ENST00000503464 DDX11L8A8MPP1 907 aa7.99□□□□□ -1.13
TOPBP1-203ENST00000503464 ADM5C9JUS6 153 aa7.99□□□□□ -1.13
TOPBP1-203ENST00000503464 GRIN3BO60391 1043 aa7.99□□□□□ -1.13
TOPBP1-203ENST00000503464 GADD45BO75293 160 aaPredicted RBP7.99□□□□□ -1.13
TOPBP1-203ENST00000503464 NDUFB10O96000 172 aa7.99□□□□□ -1.13
TOPBP1-203ENST00000503464 MMP1P03956 469 aa7.99□□□□□ -1.13
TOPBP1-203ENST00000503464 PARP1P09874 1014 aaKnown RBP7.99□□□□□ -1.13
TOPBP1-203ENST00000503464 SCG2P13521 617 aa7.99□□□□□ -1.13
TOPBP1-203ENST00000503464 U2AF2P26368 475 aaKnown RBP eCLIP7.99□□□□□ -1.13
TOPBP1-203ENST00000503464 INPP5BP32019 993 aa7.99□□□□□ -1.13
TOPBP1-203ENST00000503464 ATP2B2Q01814 1243 aa7.99□□□□□ -1.13
TOPBP1-203ENST00000503464 ASPRV1Q53RT3 343 aa7.99□□□□□ -1.13
TOPBP1-203ENST00000503464 NOM1Q5C9Z4 860 aaKnown RBP7.99□□□□□ -1.13
TOPBP1-203ENST00000503464 WWC2Q6AWC2 1192 aa7.99□□□□□ -1.13
TOPBP1-203ENST00000503464 GMCL1P1Q8NEA9 526 aa7.99□□□□□ -1.13
TOPBP1-203ENST00000503464 PIBF1Q8WXW3 757 aa7.99□□□□□ -1.13
TOPBP1-203ENST00000503464 TNFRSF25Q93038 417 aa7.99□□□□□ -1.13
TOPBP1-203ENST00000503464 NUP88Q99567 741 aaPredicted RBP7.99□□□□□ -1.13
TOPBP1-203ENST00000503464 ANP32EQ9BTT0 268 aa7.99□□□□□ -1.13
TOPBP1-203ENST00000503464 PHF20Q9BVI0 1012 aa7.99□□□□□ -1.13
TOPBP1-203ENST00000503464 UBA5Q9GZZ9 404 aa7.99□□□□□ -1.13
TOPBP1-203ENST00000503464 ZSCAN16Q9H4T2 348 aaPredicted RBP7.99□□□□□ -1.13
TOPBP1-203ENST00000503464 RIOX1Q9H6W3 641 aa7.99□□□□□ -1.13
TOPBP1-203ENST00000503464 GPCPD1Q9NPB8 672 aa7.99□□□□□ -1.13
TOPBP1-203ENST00000503464 ZNF112Q9UJU3 913 aa7.99□□□□□ -1.13
TOPBP1-203ENST00000503464 FARP1Q9Y4F1 1045 aaPredicted RBP7.99□□□□□ -1.13
TOPBP1-203ENST00000503464 LOC285556D6RIA3 1793 aa7.98□□□□□ -1.13
TOPBP1-203ENST00000503464 FAM205CA6NFA0 338 aa7.98□□□□□ -1.13
TOPBP1-203ENST00000503464 BTBD18B2RXH4 712 aa7.98□□□□□ -1.13
TOPBP1-203ENST00000503464 F5H6K3 240 aa7.98□□□□□ -1.13
TOPBP1-203ENST00000503464 STXBP3O00186 592 aa7.98□□□□□ -1.13
TOPBP1-203ENST00000503464 FIBPO43427 364 aa7.98□□□□□ -1.13
TOPBP1-203ENST00000503464 PPP1R11O60927 126 aaPredicted RBP7.98□□□□□ -1.13
TOPBP1-203ENST00000503464 PRPF40AO75400 957 aaKnown RBP7.98□□□□□ -1.13
TOPBP1-203ENST00000503464 SMARCA1P28370 1054 aa7.98□□□□□ -1.13
TOPBP1-203ENST00000503464 LMOD1P29536 600 aaPredicted RBP7.98□□□□□ -1.13
TOPBP1-203ENST00000503464 EPHX2P34913 555 aa7.98□□□□□ -1.13
TOPBP1-203ENST00000503464 SLC16A2P36021 539 aa7.98□□□□□ -1.13
TOPBP1-203ENST00000503464 GNAQP50148 359 aa7.98□□□□□ -1.13
TOPBP1-203ENST00000503464 KLRC3Q07444 240 aa7.98□□□□□ -1.13
TOPBP1-203ENST00000503464 NR5A1Q13285 461 aa7.98□□□□□ -1.13
TOPBP1-203ENST00000503464 EARS2Q5JPH6 523 aaKnown RBP7.98□□□□□ -1.13
TOPBP1-203ENST00000503464 SLFN13Q68D06 897 aa7.98□□□□□ -1.13
TOPBP1-203ENST00000503464 KCTD1Q719H9 257 aa7.98□□□□□ -1.13
TOPBP1-203ENST00000503464 USP48Q86UV5 1035 aa7.98□□□□□ -1.13
TOPBP1-203ENST00000503464 GPT2Q8TD30 523 aa7.98□□□□□ -1.13
TOPBP1-203ENST00000503464 DCAF4Q8WV16 495 aa7.98□□□□□ -1.13
TOPBP1-203ENST00000503464 WASF1Q92558 559 aa7.98□□□□□ -1.13
TOPBP1-203ENST00000503464 GPKOWQ92917 476 aaPredicted RBP eCLIP7.98□□□□□ -1.13
TOPBP1-203ENST00000503464 MTMR8Q96EF0 704 aa7.98□□□□□ -1.13
TOPBP1-203ENST00000503464 GMCL1Q96IK5 515 aa7.98□□□□□ -1.13
TOPBP1-203ENST00000503464 USP28Q96RU2 1077 aa7.98□□□□□ -1.13
TOPBP1-203ENST00000503464 LZTS2Q9BRK4 669 aa7.98□□□□□ -1.13
TOPBP1-203ENST00000503464 JMJD4Q9H9V9 463 aa7.98□□□□□ -1.13
TOPBP1-203ENST00000503464 TFIP11Q9UBB9 837 aaKnown RBP7.98□□□□□ -1.13
TOPBP1-203ENST00000503464 SYNPO2Q9UMS6 1093 aa7.98□□□□□ -1.13
TOPBP1-203ENST00000503464 SSUH2Q9Y2M2 353 aa7.98□□□□□ -1.13
TOPBP1-203ENST00000503464 TMX2Q9Y320 296 aa7.98□□□□□ -1.13
TOPBP1-203ENST00000503464 PPP2R3BQ9Y5P8 575 aa7.98□□□□□ -1.13
TOPBP1-203ENST00000503464 COL11A1P12107 1806 aaPredicted RBP7.98□□□□□ -1.13
TOPBP1-203ENST00000503464 RBBP6Q7Z6E9 1792 aaKnown RBP7.97□□□□□ -1.13
TOPBP1-203ENST00000503464 M0R2N6 131 aa7.97□□□□□ -1.13
TOPBP1-203ENST00000503464 WNT7AO00755 349 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 364.2 ms