RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 METAP2P50579 478 aaKnown RBP eCLIP15.84■□□□□ 0.13
CPNE1-227ENST00000498056 IKQ13123 557 aaPredicted RBP15.84■□□□□ 0.13
CPNE1-227ENST00000498056 SAMD1Q6SPF0 538 aaPredicted RBP15.84■□□□□ 0.13
CPNE1-227ENST00000498056 FBXL16Q8N461 479 aa15.84■□□□□ 0.13
CPNE1-227ENST00000498056 C12orf42Q96LP6 360 aa15.84■□□□□ 0.13
CPNE1-227ENST00000498056 RPAP3Q9H6T3 665 aaPredicted RBP15.84■□□□□ 0.13
CPNE1-227ENST00000498056 MANSC4A6NHS7 340 aaPredicted RBP15.83■□□□□ 0.12
CPNE1-227ENST00000498056 PARP1P09874 1014 aaKnown RBP15.83■□□□□ 0.12
CPNE1-227ENST00000498056 GOLGA8HP0CJ92 632 aa15.83■□□□□ 0.12
CPNE1-227ENST00000498056 BMP3P12645 472 aa15.83■□□□□ 0.12
CPNE1-227ENST00000498056 GRM4Q14833 912 aa15.83■□□□□ 0.12
CPNE1-227ENST00000498056 RTN1Q16799 776 aa15.83■□□□□ 0.12
CPNE1-227ENST00000498056 ASPRV1Q53RT3 343 aa15.83■□□□□ 0.12
CPNE1-227ENST00000498056 SH3D19Q5HYK7 790 aa15.83■□□□□ 0.12
CPNE1-227ENST00000498056 TREML2Q5T2D2 321 aa15.83■□□□□ 0.12
CPNE1-227ENST00000498056 KCTD1Q719H9 257 aa15.83■□□□□ 0.12
CPNE1-227ENST00000498056 PROCA1Q8NCQ7 364 aaPredicted RBP15.83■□□□□ 0.12
CPNE1-227ENST00000498056 GMCL1Q96IK5 515 aa15.83■□□□□ 0.12
CPNE1-227ENST00000498056 ALDH8A1Q9H2A2 487 aaPredicted RBP15.83■□□□□ 0.12
CPNE1-227ENST00000498056 GPCPD1Q9NPB8 672 aa15.83■□□□□ 0.12
CPNE1-227ENST00000498056 TPCN1Q9ULQ1 816 aa15.83■□□□□ 0.12
CPNE1-227ENST00000498056 NID2Q14112 1375 aa15.83■□□□□ 0.12
CPNE1-227ENST00000498056 PLXNB2O15031 1838 aa15.82■□□□□ 0.12
CPNE1-227ENST00000498056 MGAMO43451 1857 aa15.82■□□□□ 0.12
CPNE1-227ENST00000498056 SMCHD1A6NHR9 2005 aa15.82■□□□□ 0.12
CPNE1-227ENST00000498056 KIF5BP33176 963 aa15.82■□□□□ 0.12
CPNE1-227ENST00000498056 CCT2P78371 535 aaKnown RBP15.82■□□□□ 0.12
CPNE1-227ENST00000498056 ZNF543Q08ER8 600 aa15.82■□□□□ 0.12
CPNE1-227ENST00000498056 SREBF2Q12772 1141 aa15.82■□□□□ 0.12
CPNE1-227ENST00000498056 TROAPQ12815 778 aa15.82■□□□□ 0.12
CPNE1-227ENST00000498056 NOGQ13253 232 aa15.82■□□□□ 0.12
CPNE1-227ENST00000498056 FASTKD5Q7L8L6 764 aaKnown RBP15.82■□□□□ 0.12
CPNE1-227ENST00000498056 HSCBQ8IWL3 235 aa15.82■□□□□ 0.12
CPNE1-227ENST00000498056 BRI3BPQ8WY22 251 aa15.82■□□□□ 0.12
CPNE1-227ENST00000498056 MS4A4AQ96JQ5 239 aa15.82■□□□□ 0.12
CPNE1-227ENST00000498056 SLKQ9H2G2 1235 aaPredicted RBP15.82■□□□□ 0.12
CPNE1-227ENST00000498056 AGTPBP1Q9UPW5 1226 aa15.82■□□□□ 0.12
CPNE1-227ENST00000498056 DHX16O60231 1041 aaKnown RBP15.81■□□□□ 0.12
CPNE1-227ENST00000498056 AOC2O75106 756 aa15.81■□□□□ 0.12
CPNE1-227ENST00000498056 SNHG28P0DPA3 235 aa15.81■□□□□ 0.12
CPNE1-227ENST00000498056 PDIA3P30101 505 aaKnown RBP15.81■□□□□ 0.12
CPNE1-227ENST00000498056 IRX3P78415 501 aaPredicted RBP15.81■□□□□ 0.12
CPNE1-227ENST00000498056 MOGSQ13724 837 aa15.81■□□□□ 0.12
CPNE1-227ENST00000498056 GPATCH4Q5T3I0 446 aaKnown RBP15.81■□□□□ 0.12
CPNE1-227ENST00000498056 WDR33Q9C0J8 1336 aaKnown RBP15.81■□□□□ 0.12
CPNE1-227ENST00000498056 NCOA5Q9HCD5 579 aaKnown RBP15.81■□□□□ 0.12
CPNE1-227ENST00000498056 LIMCH1Q9UPQ0 1083 aa15.81■□□□□ 0.12
CPNE1-227ENST00000498056 HPS5Q9UPZ3 1129 aa15.81■□□□□ 0.12
CPNE1-227ENST00000498056 BTBD19C9JJ37 291 aa15.8■□□□□ 0.12
CPNE1-227ENST00000498056 TMEM232C9JQI7 657 aa15.8■□□□□ 0.12
CPNE1-227ENST00000498056 FLOT1O75955 427 aa15.8■□□□□ 0.12
CPNE1-227ENST00000498056 PLEKHA8P1O95397 391 aa15.8■□□□□ 0.12
CPNE1-227ENST00000498056 MCM2P49736 904 aa15.8■□□□□ 0.12
CPNE1-227ENST00000498056 VEGFBP49765 207 aa15.8■□□□□ 0.12
CPNE1-227ENST00000498056 STAT2P52630 851 aa15.8■□□□□ 0.12
CPNE1-227ENST00000498056 RCAN1P53805 252 aa15.8■□□□□ 0.12
CPNE1-227ENST00000498056 EVCP57679 992 aa15.8■□□□□ 0.12
CPNE1-227ENST00000498056 ME3Q16798 604 aa15.8■□□□□ 0.12
CPNE1-227ENST00000498056 STAG2Q8N3U4 1231 aa15.8■□□□□ 0.12
CPNE1-227ENST00000498056 IL27Q8NEV9 243 aa15.8■□□□□ 0.12
CPNE1-227ENST00000498056 ZNF274Q96GC6 653 aaPredicted RBP15.8■□□□□ 0.12
CPNE1-227ENST00000498056 CPVLQ9H3G5 476 aa15.8■□□□□ 0.12
CPNE1-227ENST00000498056 RBM28Q9NW13 759 aaKnown RBP15.8■□□□□ 0.12
CPNE1-227ENST00000498056 MAD2L2Q9UI95 211 aa15.8■□□□□ 0.12
CPNE1-227ENST00000498056 ZSWIM8A7E2V4 1837 aa15.8■□□□□ 0.12
CPNE1-227ENST00000498056 USP17L15C9J2P7 530 aa15.79■□□□□ 0.12
CPNE1-227ENST00000498056 USP17L13C9JLJ4 530 aa15.79■□□□□ 0.12
CPNE1-227ENST00000498056 USP17L11C9JVI0 530 aa15.79■□□□□ 0.12
CPNE1-227ENST00000498056 USP17L18D6R9N7 530 aa15.79■□□□□ 0.12
CPNE1-227ENST00000498056 USP17L22D6RA61 530 aa15.79■□□□□ 0.12
CPNE1-227ENST00000498056 USP17L17D6RBQ6 530 aa15.79■□□□□ 0.12
CPNE1-227ENST00000498056 USP17L19D6RCP7 530 aa15.79■□□□□ 0.12
CPNE1-227ENST00000498056 USP17L20D6RJB6 530 aa15.79■□□□□ 0.12
CPNE1-227ENST00000498056 CPLX1O14810 134 aa15.79■□□□□ 0.12
CPNE1-227ENST00000498056 SLC16A2P36021 539 aa15.79■□□□□ 0.12
CPNE1-227ENST00000498056 KIF23Q02241 960 aaPredicted RBP15.79■□□□□ 0.12
CPNE1-227ENST00000498056 USP17L24Q0WX57 530 aa15.79■□□□□ 0.12
CPNE1-227ENST00000498056 SCRN1Q12765 414 aa15.79■□□□□ 0.12
CPNE1-227ENST00000498056 PABPC4Q13310 644 aaKnown RBP eCLIP15.79■□□□□ 0.12
CPNE1-227ENST00000498056 TTBK2Q6IQ55 1244 aa15.79■□□□□ 0.12
CPNE1-227ENST00000498056 CCDC83Q8IWF9 413 aa15.79■□□□□ 0.12
CPNE1-227ENST00000498056 NECAB1Q8N987 351 aa15.79■□□□□ 0.12
CPNE1-227ENST00000498056 FANCBQ8NB91 859 aa15.79■□□□□ 0.12
CPNE1-227ENST00000498056 GTF3C6Q969F1 213 aa15.79■□□□□ 0.12
CPNE1-227ENST00000498056 KIFC2Q96AC6 838 aa15.79■□□□□ 0.12
CPNE1-227ENST00000498056 ZSCAN31Q96LW9 406 aaPredicted RBP15.79■□□□□ 0.12
CPNE1-227ENST00000498056 ZIC5Q96T25 663 aa15.79■□□□□ 0.12
CPNE1-227ENST00000498056 TSHZ2Q9NRE2 1034 aa15.79■□□□□ 0.12
CPNE1-227ENST00000498056 SH2B1Q9NRF2 756 aaPredicted RBP15.79■□□□□ 0.12
CPNE1-227ENST00000498056 FBXO28Q9NVF7 368 aa15.79■□□□□ 0.12
CPNE1-227ENST00000498056 PNMA3Q9UL41 463 aa15.79■□□□□ 0.12
CPNE1-227ENST00000498056 CNTNAP5Q8WYK1 1306 aa15.78■□□□□ 0.12
CPNE1-227ENST00000498056 KLRF2D3W0D1 207 aa15.78■□□□□ 0.12
CPNE1-227ENST00000498056 K7ELQ4 463 aaPredicted RBP15.78■□□□□ 0.12
CPNE1-227ENST00000498056 PDHXO00330 501 aa15.78■□□□□ 0.12
CPNE1-227ENST00000498056 IGF2BP3O00425 579 aaKnown RBP eCLIP15.78■□□□□ 0.12
CPNE1-227ENST00000498056 CDC27P30260 824 aa15.78■□□□□ 0.12
CPNE1-227ENST00000498056 ANP32AP39687 249 aaKnown RBP15.78■□□□□ 0.12
CPNE1-227ENST00000498056 GPAT2Q6NUI2 795 aa15.78■□□□□ 0.12
CPNE1-227ENST00000498056 TMTC3Q6ZXV5 915 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 117.7 ms