RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 IVNS1ABPQ9Y6Y0 642 aa16.7■□□□□ 0.26
VTI1A-206ENST00000489142 RPTORQ8N122 1335 aa16.7■□□□□ 0.26
VTI1A-206ENST00000489142 ZNF236Q9UL36 1845 aa16.69■□□□□ 0.26
VTI1A-206ENST00000489142 IGKV6D-41A0A0C4DH26 115 aa16.69■□□□□ 0.26
VTI1A-206ENST00000489142 SLC15A5A6NIM6 579 aa16.69■□□□□ 0.26
VTI1A-206ENST00000489142 ERCC3P19447 782 aa16.69■□□□□ 0.26
VTI1A-206ENST00000489142 CCND3P30281 292 aaPredicted RBP16.69■□□□□ 0.26
VTI1A-206ENST00000489142 NMIQ13287 307 aaPredicted RBP16.69■□□□□ 0.26
VTI1A-206ENST00000489142 GRB14Q14449 540 aa16.69■□□□□ 0.26
VTI1A-206ENST00000489142 TMEM132BQ14DG7 1078 aa16.69■□□□□ 0.26
VTI1A-206ENST00000489142 ZNF589Q86UQ0 364 aaPredicted RBP16.69■□□□□ 0.26
VTI1A-206ENST00000489142 NCAPG2Q86XI2 1143 aa16.69■□□□□ 0.26
VTI1A-206ENST00000489142 LRRC47Q8N1G4 583 aaKnown RBP16.69■□□□□ 0.26
VTI1A-206ENST00000489142 NPLOC4Q8TAT6 608 aa16.69■□□□□ 0.26
VTI1A-206ENST00000489142 DPF3Q92784 378 aa16.69■□□□□ 0.26
VTI1A-206ENST00000489142 TACC3Q9Y6A5 838 aa16.69■□□□□ 0.26
VTI1A-206ENST00000489142 NDUFB10O96000 172 aa16.68■□□□□ 0.26
VTI1A-206ENST00000489142 TSPY3P0CV98 308 aa16.68■□□□□ 0.26
VTI1A-206ENST00000489142 TSPY8P0CW00 308 aa16.68■□□□□ 0.26
VTI1A-206ENST00000489142 PDE4BQ07343 736 aa16.68■□□□□ 0.26
VTI1A-206ENST00000489142 MAP3K21Q5TCX8 1036 aa16.68■□□□□ 0.26
VTI1A-206ENST00000489142 CRISPLD2Q9H0B8 497 aa16.68■□□□□ 0.26
VTI1A-206ENST00000489142 ZNF287Q9HBT7 754 aa16.68■□□□□ 0.26
VTI1A-206ENST00000489142 HELLSQ9NRZ9 838 aa16.68■□□□□ 0.26
VTI1A-206ENST00000489142 NYAP2Q9P242 653 aa16.68■□□□□ 0.26
VTI1A-206ENST00000489142 F5H6K3 240 aa16.67■□□□□ 0.26
VTI1A-206ENST00000489142 SLC3A2P08195 630 aaKnown RBP16.67■□□□□ 0.26
VTI1A-206ENST00000489142 ADORA2AP29274 412 aa16.67■□□□□ 0.26
VTI1A-206ENST00000489142 TFAP4Q01664 338 aa16.67■□□□□ 0.26
VTI1A-206ENST00000489142 KLRC3Q07444 240 aa16.67■□□□□ 0.26
VTI1A-206ENST00000489142 MCMDC2Q4G0Z9 681 aa16.67■□□□□ 0.26
VTI1A-206ENST00000489142 MB21D1Q8N884 522 aa16.67■□□□□ 0.26
VTI1A-206ENST00000489142 MTMR4Q9NYA4 1195 aa16.67■□□□□ 0.26
VTI1A-206ENST00000489142 PPP1R9AQ9ULJ8 1098 aa16.67■□□□□ 0.26
VTI1A-206ENST00000489142 PLXNA1Q9UIW2 1896 aa16.67■□□□□ 0.26
VTI1A-206ENST00000489142 PLIN4Q96Q06 1357 aa16.66■□□□□ 0.26
VTI1A-206ENST00000489142 H0YGN5 161 aa16.66■□□□□ 0.26
VTI1A-206ENST00000489142 VWA5AO00534 786 aa16.66■□□□□ 0.26
VTI1A-206ENST00000489142 CEP290O15078 2479 aa16.66■□□□□ 0.26
VTI1A-206ENST00000489142 NMT2O60551 498 aa16.66■□□□□ 0.26
VTI1A-206ENST00000489142 CYP2C19P33261 490 aa16.66■□□□□ 0.26
VTI1A-206ENST00000489142 DPP9Q86TI2 863 aa16.66■□□□□ 0.26
VTI1A-206ENST00000489142 TRMT44Q8IYL2 757 aaKnown RBP16.66■□□□□ 0.26
VTI1A-206ENST00000489142 PAWRQ96IZ0 340 aaKnown RBP16.66■□□□□ 0.26
VTI1A-206ENST00000489142 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.66■□□□□ 0.26
VTI1A-206ENST00000489142 COBLO75128 1261 aa16.65■□□□□ 0.26
VTI1A-206ENST00000489142 TTLL1O95922 423 aa16.65■□□□□ 0.26
VTI1A-206ENST00000489142 HAND2P61296 217 aa16.65■□□□□ 0.26
VTI1A-206ENST00000489142 RASGRP2Q7LDG7 609 aa16.65■□□□□ 0.26
VTI1A-206ENST00000489142 SHCBP1Q8NEM2 672 aa16.65■□□□□ 0.26
VTI1A-206ENST00000489142 NEDD1Q8NHV4 660 aa16.65■□□□□ 0.26
VTI1A-206ENST00000489142 SLF1Q9BQI6 1058 aa16.65■□□□□ 0.26
VTI1A-206ENST00000489142 ISY1Q9ULR0 285 aaKnown RBP16.65■□□□□ 0.26
VTI1A-206ENST00000489142 ADAMTS5Q9UNA0 930 aa16.65■□□□□ 0.26
VTI1A-206ENST00000489142 CCDC171Q6TFL3 1326 aa16.65■□□□□ 0.26
VTI1A-206ENST00000489142 TSPY2A6NKD2 308 aa16.64■□□□□ 0.25
VTI1A-206ENST00000489142 RANBP6O60518 1105 aaKnown RBP16.64■□□□□ 0.25
VTI1A-206ENST00000489142 HSPD1P10809 573 aaKnown RBP16.64■□□□□ 0.25
VTI1A-206ENST00000489142 SDSP20132 328 aa16.64■□□□□ 0.25
VTI1A-206ENST00000489142 SLC4A3P48751 1232 aa16.64■□□□□ 0.25
VTI1A-206ENST00000489142 MNX1P50219 401 aaPredicted RBP16.64■□□□□ 0.25
VTI1A-206ENST00000489142 RRP12Q5JTH9 1297 aaKnown RBP16.64■□□□□ 0.25
VTI1A-206ENST00000489142 MFSD14CQ5VZR4 134 aa16.64■□□□□ 0.25
VTI1A-206ENST00000489142 REPS2Q8NFH8 660 aa16.64■□□□□ 0.25
VTI1A-206ENST00000489142 HTATIP2Q9BUP3 242 aa16.64■□□□□ 0.25
VTI1A-206ENST00000489142 TOMM22Q9NS69 142 aa16.64■□□□□ 0.25
VTI1A-206ENST00000489142 MTMR7Q9Y216 660 aa16.64■□□□□ 0.25
VTI1A-206ENST00000489142 LAMA4Q16363 1823 aa16.63■□□□□ 0.25
VTI1A-206ENST00000489142 FGAP02671 866 aa16.63■□□□□ 0.25
VTI1A-206ENST00000489142 PGK2P07205 417 aa16.63■□□□□ 0.25
VTI1A-206ENST00000489142 HOXC6P09630 235 aa16.63■□□□□ 0.25
VTI1A-206ENST00000489142 PDE4AP27815 886 aa16.63■□□□□ 0.25
VTI1A-206ENST00000489142 CNGA1P29973 690 aa16.63■□□□□ 0.25
VTI1A-206ENST00000489142 STAT3P40763 770 aa16.63■□□□□ 0.25
VTI1A-206ENST00000489142 SLFN13Q68D06 897 aa16.63■□□□□ 0.25
VTI1A-206ENST00000489142 TRPV1Q8NER1 839 aa16.63■□□□□ 0.25
VTI1A-206ENST00000489142 KIFC2Q96AC6 838 aa16.63■□□□□ 0.25
VTI1A-206ENST00000489142 OSBPL3Q9H4L5 887 aa16.63■□□□□ 0.25
VTI1A-206ENST00000489142 MROH8Q9H579 483 aa16.63■□□□□ 0.25
VTI1A-206ENST00000489142 IL17RBQ9NRM6 502 aa16.63■□□□□ 0.25
VTI1A-206ENST00000489142 ZNF214Q9UL59 606 aaPredicted RBP16.63■□□□□ 0.25
VTI1A-206ENST00000489142 STRNO43815 780 aa16.62■□□□□ 0.25
VTI1A-206ENST00000489142 ALX1Q15699 326 aa16.62■□□□□ 0.25
VTI1A-206ENST00000489142 SNRNP48Q6IEG0 339 aaKnown RBP16.62■□□□□ 0.25
VTI1A-206ENST00000489142 CWC27Q6UX04 472 aaKnown RBP16.62■□□□□ 0.25
VTI1A-206ENST00000489142 RIOX2Q8IUF8 465 aa16.62■□□□□ 0.25
VTI1A-206ENST00000489142 CPXCR1Q8N123 301 aa16.62■□□□□ 0.25
VTI1A-206ENST00000489142 MKL1Q969V6 931 aa16.62■□□□□ 0.25
VTI1A-206ENST00000489142 MMP19Q99542 508 aa16.62■□□□□ 0.25
VTI1A-206ENST00000489142 ANAPC4Q9UJX5 808 aa16.62■□□□□ 0.25
VTI1A-206ENST00000489142 OGDHLQ9ULD0 1010 aa16.62■□□□□ 0.25
VTI1A-206ENST00000489142 STX8Q9UNK0 236 aa16.62■□□□□ 0.25
VTI1A-206ENST00000489142 RIPK3Q9Y572 518 aa16.62■□□□□ 0.25
VTI1A-206ENST00000489142 SLC25A27O95847 323 aa16.61■□□□□ 0.25
VTI1A-206ENST00000489142 FCER1AP12319 257 aa16.61■□□□□ 0.25
VTI1A-206ENST00000489142 PRAMEF19Q5SWL8 479 aa16.61■□□□□ 0.25
VTI1A-206ENST00000489142 LHX8Q68G74 356 aa16.61■□□□□ 0.25
VTI1A-206ENST00000489142 NECAB2Q7Z6G3 386 aa16.61■□□□□ 0.25
VTI1A-206ENST00000489142 GMCL1P1Q8NEA9 526 aa16.61■□□□□ 0.25
VTI1A-206ENST00000489142 NBPF3Q9H094 633 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms