RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 TRMT112Q9UI30 125 aaKnown RBP22.02■■□□□ 1.12
HMG20B-213ENST00000488973 N4BP3O15049 544 aa22.01■■□□□ 1.11
HMG20B-213ENST00000488973 SEC23AQ15436 765 aa22.01■■□□□ 1.11
HMG20B-213ENST00000488973 VPS54Q9P1Q0 977 aa22.01■■□□□ 1.11
HMG20B-213ENST00000488973 RWDD2AQ9UIY3 292 aa22.01■■□□□ 1.11
HMG20B-213ENST00000488973 PRPF3O43395 683 aaKnown RBP22.01■■□□□ 1.11
HMG20B-213ENST00000488973 CCT6AP40227 531 aaKnown RBP22.01■■□□□ 1.11
HMG20B-213ENST00000488973 AMPD2Q01433 879 aa22.01■■□□□ 1.11
HMG20B-213ENST00000488973 GRIPAP1Q4V328 841 aa22.01■■□□□ 1.11
HMG20B-213ENST00000488973 EARS2Q5JPH6 523 aaKnown RBP22.01■■□□□ 1.11
HMG20B-213ENST00000488973 WDR93Q6P2C0 686 aa22.01■■□□□ 1.11
HMG20B-213ENST00000488973 FAM71BQ8TC56 605 aa22.01■■□□□ 1.11
HMG20B-213ENST00000488973 DISP2A7MBM2 1401 aa22.01■■□□□ 1.11
HMG20B-213ENST00000488973 ANKRD20A12PQ8NF67 263 aa22■■□□□ 1.11
HMG20B-213ENST00000488973 HELBQ8NG08 1087 aaPredicted RBP22■■□□□ 1.11
HMG20B-213ENST00000488973 PYM1Q9BRP8 204 aaKnown RBP22■■□□□ 1.11
HMG20B-213ENST00000488973 ACBD3Q9H3P7 528 aa22■■□□□ 1.11
HMG20B-213ENST00000488973 MYO6Q9UM54 1294 aa22■■□□□ 1.11
HMG20B-213ENST00000488973 MYO1CO00159 1063 aa22■■□□□ 1.11
HMG20B-213ENST00000488973 ABL1P00519 1130 aa22■■□□□ 1.11
HMG20B-213ENST00000488973 COPB1P53618 953 aaKnown RBP22■■□□□ 1.11
HMG20B-213ENST00000488973 PPARAQ07869 468 aa22■■□□□ 1.11
HMG20B-213ENST00000488973 NUP88Q99567 741 aaPredicted RBP22■■□□□ 1.11
HMG20B-213ENST00000488973 SUGCTQ9HAC7 445 aa22■■□□□ 1.11
HMG20B-213ENST00000488973 FAN1Q9Y2M0 1017 aa22■■□□□ 1.11
HMG20B-213ENST00000488973 DLEC1Q9Y238 1755 aa22■■□□□ 1.11
HMG20B-213ENST00000488973 HSP90B2PQ58FF3 399 aa21.99■■□□□ 1.11
HMG20B-213ENST00000488973 SRLQ86TD4 932 aa21.99■■□□□ 1.11
HMG20B-213ENST00000488973 MED4Q9NPJ6 270 aa21.99■■□□□ 1.11
HMG20B-213ENST00000488973 TNKSO95271 1327 aa21.99■■□□□ 1.11
HMG20B-213ENST00000488973 N4BP1O75113 896 aaKnown RBP21.99■■□□□ 1.11
HMG20B-213ENST00000488973 CCDC172P0C7W6 258 aa21.99■■□□□ 1.11
HMG20B-213ENST00000488973 XDHP47989 1333 aa21.99■■□□□ 1.11
HMG20B-213ENST00000488973 FUT2Q10981 343 aa21.99■■□□□ 1.11
HMG20B-213ENST00000488973 E2F4Q16254 413 aa21.99■■□□□ 1.11
HMG20B-213ENST00000488973 ESR2Q92731 530 aa21.99■■□□□ 1.11
HMG20B-213ENST00000488973 ATP2C1P98194 919 aaPredicted RBP21.98■■□□□ 1.11
HMG20B-213ENST00000488973 RRAGBQ5VZM2 374 aa21.98■■□□□ 1.11
HMG20B-213ENST00000488973 ANAPC4Q9UJX5 808 aa21.98■■□□□ 1.11
HMG20B-213ENST00000488973 ASAP1Q9ULH1 1129 aa21.98■■□□□ 1.11
HMG20B-213ENST00000488973 ITGB4P16144 1822 aa21.98■■□□□ 1.11
HMG20B-213ENST00000488973 COL16A1Q07092 1604 aaPredicted RBP21.98■■□□□ 1.11
HMG20B-213ENST00000488973 TFRCP02786 760 aaKnown RBP21.98■■□□□ 1.11
HMG20B-213ENST00000488973 PAK1Q13153 545 aa21.98■■□□□ 1.11
HMG20B-213ENST00000488973 TCP11X2Q5H9J9 407 aa21.98■■□□□ 1.11
HMG20B-213ENST00000488973 TNFRSF25Q93038 417 aa21.98■■□□□ 1.11
HMG20B-213ENST00000488973 VPS16Q9H269 839 aa21.98■■□□□ 1.11
HMG20B-213ENST00000488973 RNF225M0QZC1 329 aaPredicted RBP21.97■■□□□ 1.11
HMG20B-213ENST00000488973 KRT9P35527 623 aa21.97■■□□□ 1.11
HMG20B-213ENST00000488973 TTC38Q5R3I4 469 aa21.97■■□□□ 1.11
HMG20B-213ENST00000488973 NOA1Q8NC60 698 aaKnown RBP21.97■■□□□ 1.11
HMG20B-213ENST00000488973 SLF1Q9BQI6 1058 aa21.97■■□□□ 1.11
HMG20B-213ENST00000488973 VIPAS39Q9H9C1 493 aa21.97■■□□□ 1.11
HMG20B-213ENST00000488973 RBM28Q9NW13 759 aaKnown RBP21.97■■□□□ 1.11
HMG20B-213ENST00000488973 GTPBP6O43824 516 aaPredicted RBP21.97■■□□□ 1.11
HMG20B-213ENST00000488973 ZNF174Q15697 407 aa21.97■■□□□ 1.11
HMG20B-213ENST00000488973 WWC2Q6AWC2 1192 aa21.97■■□□□ 1.11
HMG20B-213ENST00000488973 LCMT1Q9UIC8 334 aa21.97■■□□□ 1.11
HMG20B-213ENST00000488973 RRP15Q9Y3B9 282 aaKnown RBP21.97■■□□□ 1.11
HMG20B-213ENST00000488973 KCNJ18B7U540 433 aa21.96■■□□□ 1.11
HMG20B-213ENST00000488973 WNT7AO00755 349 aa21.96■■□□□ 1.11
HMG20B-213ENST00000488973 KCNJ12Q14500 433 aa21.96■■□□□ 1.11
HMG20B-213ENST00000488973 PDXDC2PQ6P474 469 aa21.96■■□□□ 1.11
HMG20B-213ENST00000488973 CCDC148Q8NFR7 591 aa21.96■■□□□ 1.11
HMG20B-213ENST00000488973 EPN1Q9Y6I3 576 aaPredicted RBP21.96■■□□□ 1.11
HMG20B-213ENST00000488973 CDC25AP30304 524 aa21.96■■□□□ 1.11
HMG20B-213ENST00000488973 PTGDRQ13258 359 aa21.96■■□□□ 1.11
HMG20B-213ENST00000488973 ZNF658Q5TYW1 1059 aaPredicted RBP21.96■■□□□ 1.11
HMG20B-213ENST00000488973 TRAPPC11Q7Z392 1133 aa21.96■■□□□ 1.11
HMG20B-213ENST00000488973 CCDC102AQ96A19 550 aa21.96■■□□□ 1.11
HMG20B-213ENST00000488973 RMND1Q9NWS8 449 aa21.96■■□□□ 1.11
HMG20B-213ENST00000488973 TAB2Q9NYJ8 693 aa21.96■■□□□ 1.11
HMG20B-213ENST00000488973 PSMD14O00487 310 aa21.95■■□□□ 1.1
HMG20B-213ENST00000488973 PRDM1O75626 825 aa21.95■■□□□ 1.1
HMG20B-213ENST00000488973 NDUFA10O95299 355 aa21.95■■□□□ 1.1
HMG20B-213ENST00000488973 MCM3P25205 808 aa21.95■■□□□ 1.1
HMG20B-213ENST00000488973 PIGBQ92521 554 aa21.95■■□□□ 1.1
HMG20B-213ENST00000488973 STAMQ92783 540 aa21.95■■□□□ 1.1
HMG20B-213ENST00000488973 BLZF1Q9H2G9 400 aa21.95■■□□□ 1.1
HMG20B-213ENST00000488973 IQSEC3Q9UPP2 1182 aaPredicted RBP21.95■■□□□ 1.1
HMG20B-213ENST00000488973 V9GY48 417 aaPredicted RBP21.95■■□□□ 1.1
HMG20B-213ENST00000488973 CATIPQ7Z7H3 387 aa21.95■■□□□ 1.1
HMG20B-213ENST00000488973 ENAHQ8N8S7 591 aaPredicted RBP21.95■■□□□ 1.1
HMG20B-213ENST00000488973 NELFBQ8WX92 580 aa21.95■■□□□ 1.1
HMG20B-213ENST00000488973 ZSCAN10Q96SZ4 725 aaPredicted RBP21.95■■□□□ 1.1
HMG20B-213ENST00000488973 HAUS4Q9H6D7 363 aa21.95■■□□□ 1.1
HMG20B-213ENST00000488973 MKRN1Q9UHC7 482 aaKnown RBP21.95■■□□□ 1.1
HMG20B-213ENST00000488973 DUOX1Q9NRD9 1551 aa21.94■■□□□ 1.1
HMG20B-213ENST00000488973 LRRIQ3A6PVS8 624 aaPredicted RBP21.94■■□□□ 1.1
HMG20B-213ENST00000488973 NPY5RQ15761 445 aa21.94■■□□□ 1.1
HMG20B-213ENST00000488973 NCAPH2Q6IBW4 605 aa21.94■■□□□ 1.1
HMG20B-213ENST00000488973 MIGA1Q8NAN2 632 aa21.94■■□□□ 1.1
HMG20B-213ENST00000488973 REXO2Q9Y3B8 237 aaKnown RBP21.94■■□□□ 1.1
HMG20B-213ENST00000488973 MINDY4BA8MYZ0 360 aa21.94■■□□□ 1.1
HMG20B-213ENST00000488973 CALM1P0DP23 149 aa21.94■■□□□ 1.1
HMG20B-213ENST00000488973 CALM2P0DP24 149 aa21.94■■□□□ 1.1
HMG20B-213ENST00000488973 CALM3P0DP25 149 aa21.94■■□□□ 1.1
HMG20B-213ENST00000488973 AARSP49588 968 aaKnown RBP eCLIP21.94■■□□□ 1.18e-6■■■■■ 52.4
HMG20B-213ENST00000488973 C10orf67Q8IYJ2 551 aa21.94■■□□□ 1.1
HMG20B-213ENST00000488973 CTCFLQ8NI51 663 aaPredicted RBP21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms