RNA–Protein interactions for RNA: ENST00000488910.1

ATG3-205, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 681 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-205ENST00000488910 PAK6Q9NQU5 681 aaPredicted RBP20.76■□□□□ 0.91
ATG3-205ENST00000488910 RPTORQ8N122 1335 aa20.76■□□□□ 0.91
ATG3-205ENST00000488910 FGAP02671 866 aa20.75■□□□□ 0.91
ATG3-205ENST00000488910 HSPD1P10809 573 aaKnown RBP20.75■□□□□ 0.91
ATG3-205ENST00000488910 TRIB2Q92519 343 aa20.75■□□□□ 0.91
ATG3-205ENST00000488910 SHISA4Q96DD7 197 aa20.75■□□□□ 0.91
ATG3-205ENST00000488910 ATG4CQ96DT6 458 aa20.75■□□□□ 0.91
ATG3-205ENST00000488910 APBA2Q99767 749 aa20.75■□□□□ 0.91
ATG3-205ENST00000488910 HMX1Q9NP08 348 aaPredicted RBP20.75■□□□□ 0.91
ATG3-205ENST00000488910 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.75■□□□□ 0.91
ATG3-205ENST00000488910 ZMYM6O95789 1325 aa20.75■□□□□ 0.91
ATG3-205ENST00000488910 CCDC171Q6TFL3 1326 aa20.75■□□□□ 0.91
ATG3-205ENST00000488910 ZKSCAN1P17029 563 aaPredicted RBP20.74■□□□□ 0.91
ATG3-205ENST00000488910 CTDSPL2Q05D32 466 aa20.74■□□□□ 0.91
ATG3-205ENST00000488910 GRB14Q14449 540 aa20.74■□□□□ 0.91
ATG3-205ENST00000488910 FAM47AQ5JRC9 791 aa20.74■□□□□ 0.91
ATG3-205ENST00000488910 FAM83BQ5T0W9 1011 aa20.74■□□□□ 0.91
ATG3-205ENST00000488910 PRPF38BQ5VTL8 546 aaKnown RBP20.74■□□□□ 0.91
ATG3-205ENST00000488910 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.74■□□□□ 0.91
ATG3-205ENST00000488910 MROH8Q9H579 483 aa20.74■□□□□ 0.91
ATG3-205ENST00000488910 PPP1R9AQ9ULJ8 1098 aa20.74■□□□□ 0.91
ATG3-205ENST00000488910 SLC25A27O95847 323 aa20.73■□□□□ 0.91
ATG3-205ENST00000488910 NDUFB10O96000 172 aa20.73■□□□□ 0.91
ATG3-205ENST00000488910 TFRCP02786 760 aaKnown RBP20.73■□□□□ 0.91
ATG3-205ENST00000488910 HOXC6P09630 235 aa20.73■□□□□ 0.91
ATG3-205ENST00000488910 FGRP09769 529 aa20.73■□□□□ 0.91
ATG3-205ENST00000488910 ERCC3P19447 782 aa20.73■□□□□ 0.91
ATG3-205ENST00000488910 PLS1Q14651 629 aa20.73■□□□□ 0.91
ATG3-205ENST00000488910 MAP3K21Q5TCX8 1036 aa20.73■□□□□ 0.91
ATG3-205ENST00000488910 ZNF589Q86UQ0 364 aaPredicted RBP20.73■□□□□ 0.91
ATG3-205ENST00000488910 GMCL1P1Q8NEA9 526 aa20.73■□□□□ 0.91
ATG3-205ENST00000488910 DEFB118Q96PH6 123 aa20.73■□□□□ 0.91
ATG3-205ENST00000488910 FBXO28Q9NVF7 368 aa20.73■□□□□ 0.91
ATG3-205ENST00000488910 MYH4Q9Y623 1939 aa20.72■□□□□ 0.91
ATG3-205ENST00000488910 PARP14Q460N5 1801 aa20.72■□□□□ 0.91
ATG3-205ENST00000488910 TSPY2A6NKD2 308 aa20.72■□□□□ 0.91
ATG3-205ENST00000488910 VWA5AO00534 786 aa20.72■□□□□ 0.91
ATG3-205ENST00000488910 ORC4O43929 436 aa20.72■□□□□ 0.91
ATG3-205ENST00000488910 TRIM32Q13049 653 aa20.72■□□□□ 0.91
ATG3-205ENST00000488910 TMEM132BQ14DG7 1078 aa20.72■□□□□ 0.91
ATG3-205ENST00000488910 SAMD1Q6SPF0 538 aaPredicted RBP20.72■□□□□ 0.91
ATG3-205ENST00000488910 ABRAQ8N0Z2 381 aa20.72■□□□□ 0.91
ATG3-205ENST00000488910 CRISPLD2Q9H0B8 497 aa20.72■□□□□ 0.91
ATG3-205ENST00000488910 DIAPH3Q9NSV4 1193 aa20.72■□□□□ 0.91
ATG3-205ENST00000488910 A0A0G2JMZ2 1700 aa20.72■□□□□ 0.91
ATG3-205ENST00000488910 PDE4AP27815 886 aa20.71■□□□□ 0.91
ATG3-205ENST00000488910 UBE2Q1Q7Z7E8 422 aa20.71■□□□□ 0.91
ATG3-205ENST00000488910 PRPF38AQ8NAV1 312 aaKnown RBP20.71■□□□□ 0.91
ATG3-205ENST00000488910 SLF1Q9BQI6 1058 aa20.71■□□□□ 0.91
ATG3-205ENST00000488910 INCENPQ9NQS7 918 aa20.71■□□□□ 0.91
ATG3-205ENST00000488910 RANBP6O60518 1105 aaKnown RBP20.7■□□□□ 0.9
ATG3-205ENST00000488910 PCP11498 1178 aaKnown RBP20.7■□□□□ 0.9
ATG3-205ENST00000488910 PRKAR2AP13861 404 aaKnown RBP20.7■□□□□ 0.9
ATG3-205ENST00000488910 COPB2P35606 906 aa20.7■□□□□ 0.9
ATG3-205ENST00000488910 STAT3P40763 770 aa20.7■□□□□ 0.9
ATG3-205ENST00000488910 CACNB2Q08289 660 aaPredicted RBP20.7■□□□□ 0.9
ATG3-205ENST00000488910 CCL14Q16627 93 aa20.7■□□□□ 0.9
ATG3-205ENST00000488910 CWC27Q6UX04 472 aaKnown RBP20.7■□□□□ 0.9
ATG3-205ENST00000488910 DPP9Q86TI2 863 aa20.7■□□□□ 0.9
ATG3-205ENST00000488910 NCAPG2Q86XI2 1143 aa20.7■□□□□ 0.9
ATG3-205ENST00000488910 RIOX2Q8IUF8 465 aa20.7■□□□□ 0.9
ATG3-205ENST00000488910 NUP88Q99567 741 aaPredicted RBP20.7■□□□□ 0.9
ATG3-205ENST00000488910 SLC5A4Q9NY91 659 aa20.7■□□□□ 0.9
ATG3-205ENST00000488910 FEM1BQ9UK73 627 aa20.7■□□□□ 0.9
ATG3-205ENST00000488910 ADORA2AP29274 412 aa20.69■□□□□ 0.9
ATG3-205ENST00000488910 MFSD14CQ5VZR4 134 aa20.69■□□□□ 0.9
ATG3-205ENST00000488910 SLFN13Q68D06 897 aa20.69■□□□□ 0.9
ATG3-205ENST00000488910 LRRC47Q8N1G4 583 aaKnown RBP20.69■□□□□ 0.9
ATG3-205ENST00000488910 TACC3Q9Y6A5 838 aa20.69■□□□□ 0.9
ATG3-205ENST00000488910 FARP2O94887 1054 aaPredicted RBP20.68■□□□□ 0.9
ATG3-205ENST00000488910 FCER1AP12319 257 aa20.68■□□□□ 0.9
ATG3-205ENST00000488910 NOVP48745 357 aa20.68■□□□□ 0.9
ATG3-205ENST00000488910 TTC22Q5TAA0 569 aa20.68■□□□□ 0.9
ATG3-205ENST00000488910 ANKLE1Q8NAG6 615 aa20.68■□□□□ 0.9
ATG3-205ENST00000488910 REPS2Q8NFH8 660 aa20.68■□□□□ 0.9
ATG3-205ENST00000488910 GMCL1Q96IK5 515 aa20.68■□□□□ 0.9
ATG3-205ENST00000488910 IL17RBQ9NRM6 502 aa20.68■□□□□ 0.9
ATG3-205ENST00000488910 ZNF214Q9UL59 606 aaPredicted RBP20.68■□□□□ 0.9
ATG3-205ENST00000488910 STX8Q9UNK0 236 aa20.68■□□□□ 0.9
ATG3-205ENST00000488910 COL11A1P12107 1806 aaPredicted RBP20.67■□□□□ 0.9
ATG3-205ENST00000488910 ZBED4O75132 1171 aa20.67■□□□□ 0.9
ATG3-205ENST00000488910 BMP3P12645 472 aa20.67■□□□□ 0.9
ATG3-205ENST00000488910 AKNAD1Q5T1N1 836 aa20.67■□□□□ 0.9
ATG3-205ENST00000488910 OLFML2BQ68BL8 750 aa20.67■□□□□ 0.9
ATG3-205ENST00000488910 NPLOC4Q8TAT6 608 aa20.67■□□□□ 0.9
ATG3-205ENST00000488910 HTATIP2Q9BUP3 242 aa20.67■□□□□ 0.9
ATG3-205ENST00000488910 RNF41Q9H4P4 317 aaPredicted RBP20.67■□□□□ 0.9
ATG3-205ENST00000488910 TOMM22Q9NS69 142 aa20.67■□□□□ 0.9
ATG3-205ENST00000488910 TCP11L1Q9NUJ3 509 aa20.67■□□□□ 0.9
ATG3-205ENST00000488910 FLRT1Q9NZU1 646 aa20.67■□□□□ 0.9
ATG3-205ENST00000488910 ZNF213O14771 459 aa20.66■□□□□ 0.9
ATG3-205ENST00000488910 ATP2A1O14983 1001 aa20.66■□□□□ 0.9
ATG3-205ENST00000488910 FDX1P10109 184 aa20.66■□□□□ 0.9
ATG3-205ENST00000488910 NT5C2P49902 561 aa20.66■□□□□ 0.9
ATG3-205ENST00000488910 MFSD6Q6ZSS7 791 aa20.66■□□□□ 0.9
ATG3-205ENST00000488910 CHURC1Q8WUH1 139 aa20.66■□□□□ 0.9
ATG3-205ENST00000488910 STAG1Q8WVM7 1258 aa20.66■□□□□ 0.9
ATG3-205ENST00000488910 DSCC1Q9BVC3 393 aa20.66■□□□□ 0.9
ATG3-205ENST00000488910 TEX13BQ9BXU2 312 aa20.66■□□□□ 0.9
ATG3-205ENST00000488910 CTDP1Q9Y5B0 961 aaPredicted RBP20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 166.7 ms