RNA–Protein interactions for RNA: ENST00000488353.2

RER1-207, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 2,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-207ENST00000488353 CCDC51Q96ER9 411 aa16.02■□□□□ 0.15
RER1-207ENST00000488353 SRP68Q9UHB9 627 aaKnown RBP16.02■□□□□ 0.15
RER1-207ENST00000488353 HPCAL4Q9UM19 191 aa16.02■□□□□ 0.15
RER1-207ENST00000488353 COL5A3P25940 1745 aaPredicted RBP16.01■□□□□ 0.15
RER1-207ENST00000488353 TEX33O43247 280 aa16.01■□□□□ 0.15
RER1-207ENST00000488353 TOB1P50616 345 aaPredicted RBP16.01■□□□□ 0.15
RER1-207ENST00000488353 TBC1D9BQ66K14 1250 aa16.01■□□□□ 0.15
RER1-207ENST00000488353 MFSD6Q6ZSS7 791 aa16.01■□□□□ 0.15
RER1-207ENST00000488353 NOSTRINQ8IVI9 506 aa16.01■□□□□ 0.15
RER1-207ENST00000488353 GRAMD1CQ8IYS0 662 aa16.01■□□□□ 0.15
RER1-207ENST00000488353 KRI1Q8N9T8 703 aaKnown RBP16.01■□□□□ 0.15
RER1-207ENST00000488353 CXorf56Q9H5V9 222 aa16.01■□□□□ 0.15
RER1-207ENST00000488353 USP21Q9UK80 565 aa16.01■□□□□ 0.15
RER1-207ENST00000488353 MFAP3LO75121 409 aa16.01■□□□□ 0.15
RER1-207ENST00000488353 FMNL1O95466 1100 aaPredicted RBP16.01■□□□□ 0.15
RER1-207ENST00000488353 MAP3K12Q12852 859 aa16.01■□□□□ 0.15
RER1-207ENST00000488353 ZNF827Q17R98 1081 aa16.01■□□□□ 0.15
RER1-207ENST00000488353 SKIDA1Q1XH10 827 aa16.01■□□□□ 0.15
RER1-207ENST00000488353 DIS3L2Q8IYB7 885 aaKnown RBP16.01■□□□□ 0.15
RER1-207ENST00000488353 ANKRD20A12PQ8NF67 263 aa16.01■□□□□ 0.15
RER1-207ENST00000488353 TAF1P21675 1872 aa16.01■□□□□ 0.15
RER1-207ENST00000488353 GSG1L2A8MUP6 293 aa16■□□□□ 0.15
RER1-207ENST00000488353 POLR2DO15514 142 aaKnown RBP16■□□□□ 0.15
RER1-207ENST00000488353 PRR29P0C7W0 189 aa16■□□□□ 0.15
RER1-207ENST00000488353 MAP2K2P36507 400 aa16■□□□□ 0.15
RER1-207ENST00000488353 TDO2P48775 406 aa16■□□□□ 0.15
RER1-207ENST00000488353 MNAT1P51948 309 aa16■□□□□ 0.15
RER1-207ENST00000488353 USP14P54578 494 aa16■□□□□ 0.15
RER1-207ENST00000488353 AMPD2Q01433 879 aa16■□□□□ 0.15
RER1-207ENST00000488353 AKAP17AQ02040 695 aaKnown RBP16■□□□□ 0.15
RER1-207ENST00000488353 NR5A1Q13285 461 aa16■□□□□ 0.15
RER1-207ENST00000488353 AKNAD1Q5T1N1 836 aa16■□□□□ 0.15
RER1-207ENST00000488353 CLEC4GQ6UXB4 293 aa16■□□□□ 0.15
RER1-207ENST00000488353 TMTC1Q8IUR5 882 aa16■□□□□ 0.15
RER1-207ENST00000488353 MIGA1Q8NAN2 632 aa16■□□□□ 0.15
RER1-207ENST00000488353 COG1Q8WTW3 980 aa16■□□□□ 0.15
RER1-207ENST00000488353 NUP133Q8WUM0 1156 aa16■□□□□ 0.15
RER1-207ENST00000488353 MED15Q96RN5 788 aa16■□□□□ 0.15
RER1-207ENST00000488353 CTAGE1Q96RT6 745 aa16■□□□□ 0.15
RER1-207ENST00000488353 CCDC172P0C7W6 258 aa16■□□□□ 0.15
RER1-207ENST00000488353 FECHP22830 423 aa16■□□□□ 0.15
RER1-207ENST00000488353 PBX1P40424 430 aa16■□□□□ 0.15
RER1-207ENST00000488353 LIFRP42702 1097 aa16■□□□□ 0.15
RER1-207ENST00000488353 LIG3P49916 1009 aa16■□□□□ 0.15
RER1-207ENST00000488353 PLCD1P51178 756 aa16■□□□□ 0.15
RER1-207ENST00000488353 STIM1Q13586 685 aa16■□□□□ 0.15
RER1-207ENST00000488353 SAFBQ15424 915 aaKnown RBP eCLIP16■□□□□ 0.15
RER1-207ENST00000488353 AMIGO3Q86WK7 504 aa16■□□□□ 0.15
RER1-207ENST00000488353 LCORLQ8N3X6 602 aa16■□□□□ 0.15
RER1-207ENST00000488353 FAM76AQ8TAV0 307 aa16■□□□□ 0.15
RER1-207ENST00000488353 SERTAD1Q9UHV2 236 aa16■□□□□ 0.15
RER1-207ENST00000488353 SLC4A4Q9Y6R1 1079 aa16■□□□□ 0.15
RER1-207ENST00000488353 FAM169AQ9Y6X4 670 aa16■□□□□ 0.15
RER1-207ENST00000488353 CLGNO14967 610 aa15.99■□□□□ 0.15
RER1-207ENST00000488353 MMP1P03956 469 aa15.99■□□□□ 0.15
RER1-207ENST00000488353 HNRNPH1P31943 449 aaKnown RBP15.99■□□□□ 0.15
RER1-207ENST00000488353 ALX1Q15699 326 aa15.99■□□□□ 0.15
RER1-207ENST00000488353 CT47A1Q5JQC4 288 aaPredicted RBP15.99■□□□□ 0.15
RER1-207ENST00000488353 NCAPH2Q6IBW4 605 aa15.99■□□□□ 0.15
RER1-207ENST00000488353 APTXQ7Z2E3 356 aaKnown RBP15.99■□□□□ 0.15
RER1-207ENST00000488353 KAT2BQ92831 832 aa15.99■□□□□ 0.15
RER1-207ENST00000488353 PCDHB6Q9Y5E3 794 aa15.99■□□□□ 0.15
RER1-207ENST00000488353 CICQ96RK0 1608 aaPredicted RBP15.99■□□□□ 0.15
RER1-207ENST00000488353 GNPATO15228 680 aa15.99■□□□□ 0.15
RER1-207ENST00000488353 IFNAR1P17181 557 aa15.99■□□□□ 0.15
RER1-207ENST00000488353 CASP14P31944 242 aa15.99■□□□□ 0.15
RER1-207ENST00000488353 CCT5P48643 541 aa15.99■□□□□ 0.15
RER1-207ENST00000488353 WTAPQ15007 396 aa15.99■□□□□ 0.15
RER1-207ENST00000488353 RTN1Q16799 776 aa15.99■□□□□ 0.15
RER1-207ENST00000488353 FILIP1LQ4L180 1135 aa15.99■□□□□ 0.15
RER1-207ENST00000488353 KANK3Q6NY19 840 aa15.99■□□□□ 0.15
RER1-207ENST00000488353 POTEDQ86YR6 584 aa15.99■□□□□ 0.15
RER1-207ENST00000488353 FNBP4Q8N3X1 1017 aaPredicted RBP15.99■□□□□ 0.15
RER1-207ENST00000488353 ACRBPQ8NEB7 543 aa15.99■□□□□ 0.15
RER1-207ENST00000488353 CRACR2AQ9BSW2 395 aa15.99■□□□□ 0.15
RER1-207ENST00000488353 ARAP2Q8WZ64 1704 aa15.98■□□□□ 0.15
RER1-207ENST00000488353 ZC3H4Q9UPT8 1303 aaKnown RBP15.98■□□□□ 0.15
RER1-207ENST00000488353 CCDC196A0A1B0GTZ2 297 aa15.98■□□□□ 0.15
RER1-207ENST00000488353 GYG1P46976 350 aa15.98■□□□□ 0.15
RER1-207ENST00000488353 RPAINQ86UA6 219 aa15.98■□□□□ 0.15
RER1-207ENST00000488353 ANKRD18AQ8IVF6 992 aa15.98■□□□□ 0.15
RER1-207ENST00000488353 OXER1Q8TDS5 423 aa15.98■□□□□ 0.15
RER1-207ENST00000488353 ADD3Q9UEY8 706 aaKnown RBP15.98■□□□□ 0.15
RER1-207ENST00000488353 CEP83Q9Y592 693 aa15.98■□□□□ 0.15
RER1-207ENST00000488353 EP400Q96L91 3159 aa15.98■□□□□ 0.15
RER1-207ENST00000488353 RTL9Q8NET4 1388 aa15.98■□□□□ 0.15
RER1-207ENST00000488353 BCORQ6W2J9 1755 aa15.98■□□□□ 0.15
RER1-207ENST00000488353 TARSL2A2RTX5 802 aaKnown RBP15.97■□□□□ 0.15
RER1-207ENST00000488353 GGCXP38435 758 aa15.97■□□□□ 0.15
RER1-207ENST00000488353 IRAK1P51617 712 aa15.97■□□□□ 0.15
RER1-207ENST00000488353 SPATA1Q5VX52 437 aa15.97■□□□□ 0.15
RER1-207ENST00000488353 USP49Q70CQ1 688 aa15.97■□□□□ 0.15
RER1-207ENST00000488353 TRIM22Q8IYM9 498 aa15.97■□□□□ 0.15
RER1-207ENST00000488353 CELF1Q92879 486 aaKnown RBP15.97■□□□□ 0.15
RER1-207ENST00000488353 KRT23Q9C075 422 aa15.97■□□□□ 0.15
RER1-207ENST00000488353 CNNM2Q9H8M5 875 aa15.97■□□□□ 0.15
RER1-207ENST00000488353 CNTNAP4Q9C0A0 1308 aa15.97■□□□□ 0.15
RER1-207ENST00000488353 MYH8P13535 1937 aa15.97■□□□□ 0.15
RER1-207ENST00000488353 ABL1P00519 1130 aa15.97■□□□□ 0.15
RER1-207ENST00000488353 ARHGAP25P42331 645 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms