RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, humanhuman

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-208ENST00000487674 BTBD7Q9P203 1132 aa10.32□□□□□ -0.76
PRKCB-208ENST00000487674 SWAP70Q9UH65 585 aa10.32□□□□□ -0.76
PRKCB-208ENST00000487674 ZMYND8Q9ULU4 1186 aaPredicted RBP10.32□□□□□ -0.76
PRKCB-208ENST00000487674 IVNS1ABPQ9Y6Y0 642 aa10.32□□□□□ -0.76
PRKCB-208ENST00000487674 BAZ2AQ9UIF9 1905 aaKnown RBP10.32□□□□□ -0.76
PRKCB-208ENST00000487674 PARP14Q460N5 1801 aa10.32□□□□□ -0.76
PRKCB-208ENST00000487674 SOX1O00570 391 aaPredicted RBP10.31□□□□□ -0.76
PRKCB-208ENST00000487674 ADD2P35612 726 aa10.31□□□□□ -0.76
PRKCB-208ENST00000487674 SIRT2Q8IXJ6 389 aa10.31□□□□□ -0.76
PRKCB-208ENST00000487674 SLC44A5Q8NCS7 719 aa10.31□□□□□ -0.76
PRKCB-208ENST00000487674 LPAR1Q92633 364 aa10.31□□□□□ -0.76
PRKCB-208ENST00000487674 TANGO6Q9C0B7 1094 aa10.31□□□□□ -0.76
PRKCB-208ENST00000487674 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.31□□□□□ -0.769e-8■■□□□ 14.4
PRKCB-208ENST00000487674 CHMP4BQ9H444 224 aaKnown RBP10.31□□□□□ -0.76
PRKCB-208ENST00000487674 ARMT1Q9H993 441 aa10.31□□□□□ -0.76
PRKCB-208ENST00000487674 PAG1Q9NWQ8 432 aa10.31□□□□□ -0.76
PRKCB-208ENST00000487674 FLRT1Q9NZU1 646 aa10.31□□□□□ -0.76
PRKCB-208ENST00000487674 COG6Q9Y2V7 657 aa10.31□□□□□ -0.76
PRKCB-208ENST00000487674 LAMA3Q16787 3333 aa10.3□□□□□ -0.76
PRKCB-208ENST00000487674 A0A1W2PRG0 241 aa10.3□□□□□ -0.76
PRKCB-208ENST00000487674 STK25O00506 426 aa10.3□□□□□ -0.76
PRKCB-208ENST00000487674 MSCO60682 206 aa10.3□□□□□ -0.76
PRKCB-208ENST00000487674 MBD4O95243 580 aa10.3□□□□□ -0.76
PRKCB-208ENST00000487674 CYP2D6P10635 497 aa10.3□□□□□ -0.76
PRKCB-208ENST00000487674 SYN1P17600 705 aa10.3□□□□□ -0.76
PRKCB-208ENST00000487674 ATP5JP18859 108 aa10.3□□□□□ -0.76
PRKCB-208ENST00000487674 MAGEA10P43363 369 aaPredicted RBP10.3□□□□□ -0.76
PRKCB-208ENST00000487674 COG2Q14746 738 aa10.3□□□□□ -0.76
PRKCB-208ENST00000487674 MB21D1Q8N884 522 aa10.3□□□□□ -0.76
PRKCB-208ENST00000487674 SHCBP1Q8NEM2 672 aa10.3□□□□□ -0.76
PRKCB-208ENST00000487674 HAUS7Q99871 368 aa10.3□□□□□ -0.76
PRKCB-208ENST00000487674 MFRPQ9BY79 579 aa10.3□□□□□ -0.76
PRKCB-208ENST00000487674 SH2D4AQ9H788 454 aa10.3□□□□□ -0.76
PRKCB-208ENST00000487674 ARHGEF10LQ9HCE6 1279 aa10.3□□□□□ -0.76
PRKCB-208ENST00000487674 ATP8A2Q9NTI2 1148 aa10.3□□□□□ -0.76
PRKCB-208ENST00000487674 HOXC10Q9NYD6 342 aa10.3□□□□□ -0.76
PRKCB-208ENST00000487674 DDX20Q9UHI6 824 aaKnown RBP10.3□□□□□ -0.76
PRKCB-208ENST00000487674 STK24Q9Y6E0 443 aa10.3□□□□□ -0.76
PRKCB-208ENST00000487674 IGHA2P01877 340 aa10.29□□□□□ -0.76
PRKCB-208ENST00000487674 ATP2B2Q01814 1243 aa10.29□□□□□ -0.76
PRKCB-208ENST00000487674 ICA1Q05084 483 aa10.29□□□□□ -0.76
PRKCB-208ENST00000487674 LRRC26Q2I0M4 334 aa10.29□□□□□ -0.76
PRKCB-208ENST00000487674 AMOTL1Q8IY63 956 aa10.29□□□□□ -0.76
PRKCB-208ENST00000487674 DDRGK1Q96HY6 314 aa10.29□□□□□ -0.76
PRKCB-208ENST00000487674 LRCH3Q96II8 777 aa10.29□□□□□ -0.76
PRKCB-208ENST00000487674 CCDC17Q96LX7 622 aa10.29□□□□□ -0.76
PRKCB-208ENST00000487674 MOV10L1Q9BXT6 1211 aaKnown RBP10.29□□□□□ -0.76
PRKCB-208ENST00000487674 SPATC1LQ9H0A9 340 aa10.29□□□□□ -0.76
PRKCB-208ENST00000487674 BOLA2Q9H3K6 86 aa10.29□□□□□ -0.76
PRKCB-208ENST00000487674 GREB1LQ9C091 1923 aaPredicted RBP10.29□□□□□ -0.76
PRKCB-208ENST00000487674 DNM1LO00429 736 aa10.28□□□□□ -0.76
PRKCB-208ENST00000487674 PRKAB2O43741 272 aa10.28□□□□□ -0.76
PRKCB-208ENST00000487674 STRNO43815 780 aa10.28□□□□□ -0.76
PRKCB-208ENST00000487674 FLOT1O75955 427 aa10.28□□□□□ -0.76
PRKCB-208ENST00000487674 CYBAP13498 195 aa10.28□□□□□ -0.76
PRKCB-208ENST00000487674 AKR1B1P15121 316 aa10.28□□□□□ -0.76
PRKCB-208ENST00000487674 ADORA2AP29274 412 aa10.28□□□□□ -0.76
PRKCB-208ENST00000487674 CYP2C19P33261 490 aa10.28□□□□□ -0.76
PRKCB-208ENST00000487674 UBE3CQ15386 1083 aa10.28□□□□□ -0.76
PRKCB-208ENST00000487674 LRIT3Q3SXY7 679 aa10.28□□□□□ -0.76
PRKCB-208ENST00000487674 KIAA1755Q5JYT7 1200 aa10.28□□□□□ -0.76
PRKCB-208ENST00000487674 C12orf60Q5U649 245 aa10.28□□□□□ -0.76
PRKCB-208ENST00000487674 OLFML2BQ68BL8 750 aa10.28□□□□□ -0.76
PRKCB-208ENST00000487674 CLEC10AQ8IUN9 316 aa10.28□□□□□ -0.76
PRKCB-208ENST00000487674 TDHQ8IZJ6 230 aa10.28□□□□□ -0.76
PRKCB-208ENST00000487674 NPLOC4Q8TAT6 608 aa10.28□□□□□ -0.76
PRKCB-208ENST00000487674 DYNLL2Q96FJ2 89 aa10.28□□□□□ -0.76
PRKCB-208ENST00000487674 BCL11AQ9H165 835 aa10.28□□□□□ -0.76
PRKCB-208ENST00000487674 VCPKMTQ9H867 229 aa10.28□□□□□ -0.76
PRKCB-208ENST00000487674 TMX2Q9Y320 296 aa10.28□□□□□ -0.76
PRKCB-208ENST00000487674 COL11A1P12107 1806 aaPredicted RBP10.28□□□□□ -0.76
PRKCB-208ENST00000487674 WDR46O15213 610 aaKnown RBP10.27□□□□□ -0.77
PRKCB-208ENST00000487674 ERCC3P19447 782 aa10.27□□□□□ -0.77
PRKCB-208ENST00000487674 CNGA1P29973 690 aa10.27□□□□□ -0.77
PRKCB-208ENST00000487674 CDK8P49336 464 aa10.27□□□□□ -0.77
PRKCB-208ENST00000487674 SLFNL1Q499Z3 407 aa10.27□□□□□ -0.77
PRKCB-208ENST00000487674 ZSCAN25Q6NSZ9 544 aa10.27□□□□□ -0.77
PRKCB-208ENST00000487674 C16orf86Q6ZW13 317 aa10.27□□□□□ -0.77
PRKCB-208ENST00000487674 DPP9Q86TI2 863 aa10.27□□□□□ -0.77
PRKCB-208ENST00000487674 SIAH1Q8IUQ4 282 aa10.27□□□□□ -0.77
PRKCB-208ENST00000487674 ABRAQ8N0Z2 381 aa10.27□□□□□ -0.77
PRKCB-208ENST00000487674 SPICE1Q8N0Z3 855 aa10.27□□□□□ -0.77
PRKCB-208ENST00000487674 TRPV1Q8NER1 839 aa10.27□□□□□ -0.77
PRKCB-208ENST00000487674 LRRCC1Q9C099 1032 aa10.27□□□□□ -0.77
PRKCB-208ENST00000487674 UBE2OQ9C0C9 1292 aaKnown RBP10.27□□□□□ -0.77
PRKCB-208ENST00000487674 MROH8Q9H579 483 aa10.27□□□□□ -0.77
PRKCB-208ENST00000487674 SLC5A4Q9NY91 659 aa10.27□□□□□ -0.77
PRKCB-208ENST00000487674 RCAN3Q9UKA8 241 aa10.27□□□□□ -0.77
PRKCB-208ENST00000487674 LTBP2Q14767 1821 aa10.27□□□□□ -0.77
PRKCB-208ENST00000487674 CYP2D7A0A087X1C5 515 aa10.26□□□□□ -0.77
PRKCB-208ENST00000487674 USP17L12C9JPN9 530 aa10.26□□□□□ -0.77
PRKCB-208ENST00000487674 USP17L21D6R901 530 aa10.26□□□□□ -0.77
PRKCB-208ENST00000487674 PLS1Q14651 629 aa10.26□□□□□ -0.77
PRKCB-208ENST00000487674 ATG4CQ96DT6 458 aa10.26□□□□□ -0.77
PRKCB-208ENST00000487674 SENP6Q9GZR1 1112 aaPredicted RBP10.26□□□□□ -0.77
PRKCB-208ENST00000487674 KANSL2Q9H9L4 492 aa10.26□□□□□ -0.77
PRKCB-208ENST00000487674 ARPP21Q9UBL0 812 aaPredicted RBP10.26□□□□□ -0.77
PRKCB-208ENST00000487674 SLC4A4Q9Y6R1 1079 aa10.26□□□□□ -0.77
PRKCB-208ENST00000487674 ROBO3Q96MS0 1386 aa10.26□□□□□ -0.77
PRKCB-208ENST00000487674 PLXNA1Q9UIW2 1896 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms