RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 SLC45A1Q9Y2W3 748 aa13.34□□□□□ -0.27
NUP50-216ENST00000486184 MYH6P13533 1939 aa13.34□□□□□ -0.27
NUP50-216ENST00000486184 COL11A1P12107 1806 aaPredicted RBP13.34□□□□□ -0.27
NUP50-216ENST00000486184 SH2B2O14492 632 aaPredicted RBP13.33□□□□□ -0.28
NUP50-216ENST00000486184 BMP3P12645 472 aa13.33□□□□□ -0.28
NUP50-216ENST00000486184 CPA1P15085 419 aa13.33□□□□□ -0.28
NUP50-216ENST00000486184 NOVP48745 357 aa13.33□□□□□ -0.28
NUP50-216ENST00000486184 MOGSQ13724 837 aa13.33□□□□□ -0.28
NUP50-216ENST00000486184 SEC23AQ15436 765 aa13.33□□□□□ -0.28
NUP50-216ENST00000486184 FAM83BQ5T0W9 1011 aa13.33□□□□□ -0.28
NUP50-216ENST00000486184 GPAT2Q6NUI2 795 aa13.33□□□□□ -0.28
NUP50-216ENST00000486184 SYNE3Q6ZMZ3 975 aa13.33□□□□□ -0.28
NUP50-216ENST00000486184 DCAF4Q8WV16 495 aa13.33□□□□□ -0.28
NUP50-216ENST00000486184 ANKS1AQ92625 1134 aa13.33□□□□□ -0.28
NUP50-216ENST00000486184 CHMP4CQ96CF2 233 aa13.33□□□□□ -0.28
NUP50-216ENST00000486184 TCEANC2Q96MN5 208 aa13.33□□□□□ -0.28
NUP50-216ENST00000486184 PTPN18Q99952 460 aa13.33□□□□□ -0.28
NUP50-216ENST00000486184 ZFYVE28Q9HCC9 887 aa13.33□□□□□ -0.28
NUP50-216ENST00000486184 CA12O43570 354 aa13.32□□□□□ -0.28
NUP50-216ENST00000486184 TRPA1O75762 1119 aa13.32□□□□□ -0.28
NUP50-216ENST00000486184 FLOT1O75955 427 aa13.32□□□□□ -0.28
NUP50-216ENST00000486184 HOXA7P31268 230 aaPredicted RBP13.32□□□□□ -0.28
NUP50-216ENST00000486184 EXOSC10Q01780 885 aaKnown RBP13.32□□□□□ -0.28
NUP50-216ENST00000486184 Q6ZUG5 572 aa13.32□□□□□ -0.28
NUP50-216ENST00000486184 IGDCC4Q8TDY8 1250 aa13.32□□□□□ -0.28
NUP50-216ENST00000486184 GMCL1Q96IK5 515 aa13.32□□□□□ -0.28
NUP50-216ENST00000486184 NUP88Q99567 741 aaPredicted RBP13.32□□□□□ -0.28
NUP50-216ENST00000486184 UPF3BQ9BZI7 483 aaKnown RBP13.32□□□□□ -0.28
NUP50-216ENST00000486184 LY9Q9HBG7 655 aa13.32□□□□□ -0.28
NUP50-216ENST00000486184 ZSWIM6Q9HCJ5 1215 aa13.32□□□□□ -0.28
NUP50-216ENST00000486184 PDRG1Q9NUG6 133 aa13.32□□□□□ -0.28
NUP50-216ENST00000486184 SAGE1Q9NXZ1 904 aa13.32□□□□□ -0.28
NUP50-216ENST00000486184 NAP1L2Q9ULW6 460 aaPredicted RBP13.32□□□□□ -0.28
NUP50-216ENST00000486184 CTDP1Q9Y5B0 961 aaPredicted RBP13.32□□□□□ -0.28
NUP50-216ENST00000486184 SLC12A7Q9Y666 1083 aa13.32□□□□□ -0.28
NUP50-216ENST00000486184 CALM1P0DP23 149 aa13.31□□□□□ -0.28
NUP50-216ENST00000486184 CALM2P0DP24 149 aa13.31□□□□□ -0.28
NUP50-216ENST00000486184 CALM3P0DP25 149 aa13.31□□□□□ -0.28
NUP50-216ENST00000486184 LIFRP42702 1097 aa13.31□□□□□ -0.28
NUP50-216ENST00000486184 RBM25P49756 843 aaKnown RBP13.31□□□□□ -0.28
NUP50-216ENST00000486184 KIAA1755Q5JYT7 1200 aa13.31□□□□□ -0.28
NUP50-216ENST00000486184 CATSPERGQ6ZRH7 1159 aa13.31□□□□□ -0.28
NUP50-216ENST00000486184 JMYQ8N9B5 988 aa13.31□□□□□ -0.28
NUP50-216ENST00000486184 GTF3C2Q8WUA4 911 aaPredicted RBP13.31□□□□□ -0.28
NUP50-216ENST00000486184 NUP133Q8WUM0 1156 aa13.31□□□□□ -0.28
NUP50-216ENST00000486184 ASCC2Q9H1I8 757 aaPredicted RBP13.31□□□□□ -0.28
NUP50-216ENST00000486184 RNF186Q9NXI6 227 aa13.31□□□□□ -0.28
NUP50-216ENST00000486184 FEM1BQ9UK73 627 aa13.31□□□□□ -0.28
NUP50-216ENST00000486184 RLFQ13129 1914 aa13.31□□□□□ -0.28
NUP50-216ENST00000486184 A0A0G2JMZ2 1700 aa13.3□□□□□ -0.28
NUP50-216ENST00000486184 TMEM232C9JQI7 657 aa13.3□□□□□ -0.28
NUP50-216ENST00000486184 DDAH1O94760 285 aa13.3□□□□□ -0.28
NUP50-216ENST00000486184 PARP1P09874 1014 aaKnown RBP13.3□□□□□ -0.28
NUP50-216ENST00000486184 CYP2C8P10632 490 aa13.3□□□□□ -0.28
NUP50-216ENST00000486184 PDHBP11177 359 aa13.3□□□□□ -0.28
NUP50-216ENST00000486184 STAT2P52630 851 aa13.3□□□□□ -0.28
NUP50-216ENST00000486184 CRHR2Q13324 411 aa13.3□□□□□ -0.28
NUP50-216ENST00000486184 COG2Q14746 738 aa13.3□□□□□ -0.28
NUP50-216ENST00000486184 ASPRV1Q53RT3 343 aa13.3□□□□□ -0.28
NUP50-216ENST00000486184 GPATCH4Q5T3I0 446 aaKnown RBP13.3□□□□□ -0.28
NUP50-216ENST00000486184 KCTD1Q719H9 257 aa13.3□□□□□ -0.28
NUP50-216ENST00000486184 FAM160B2Q86V87 743 aa13.3□□□□□ -0.28
NUP50-216ENST00000486184 ZNF654Q8IZM8 581 aa13.3□□□□□ -0.28
NUP50-216ENST00000486184 CTCFLQ8NI51 663 aaPredicted RBP13.3□□□□□ -0.28
NUP50-216ENST00000486184 CHURC1Q8WUH1 139 aa13.3□□□□□ -0.28
NUP50-216ENST00000486184 BRF1Q92994 677 aa13.3□□□□□ -0.28
NUP50-216ENST00000486184 SLF1Q9BQI6 1058 aa13.3□□□□□ -0.28
NUP50-216ENST00000486184 GPCPD1Q9NPB8 672 aa13.3□□□□□ -0.28
NUP50-216ENST00000486184 HOXC10Q9NYD6 342 aa13.3□□□□□ -0.28
NUP50-216ENST00000486184 FRMPD2Q68DX3 1309 aaPredicted RBP13.3□□□□□ -0.28
NUP50-216ENST00000486184 MGAMO43451 1857 aa13.29□□□□□ -0.28
NUP50-216ENST00000486184 KLF18A0A0U1RQI7 1052 aa13.29□□□□□ -0.28
NUP50-216ENST00000486184 DHX16O60231 1041 aaKnown RBP13.29□□□□□ -0.28
NUP50-216ENST00000486184 TBC1D8O95759 1140 aa13.29□□□□□ -0.28
NUP50-216ENST00000486184 KIF5BP33176 963 aa13.29□□□□□ -0.28
NUP50-216ENST00000486184 GCLCP48506 637 aaPredicted RBP13.29□□□□□ -0.28
NUP50-216ENST00000486184 NEK4P51957 841 aa13.29□□□□□ -0.28
NUP50-216ENST00000486184 HERVK_113P62684 666 aa13.29□□□□□ -0.28
NUP50-216ENST00000486184 COL9A3Q14050 684 aaPredicted RBP13.29□□□□□ -0.28
NUP50-216ENST00000486184 ANKRD1Q15327 319 aa13.29□□□□□ -0.28
NUP50-216ENST00000486184 SGMS1Q86VZ5 419 aa13.29□□□□□ -0.28
NUP50-216ENST00000486184 TBC1D32Q96NH3 1257 aa13.29□□□□□ -0.28
NUP50-216ENST00000486184 SENP2Q9HC62 589 aa13.29□□□□□ -0.28
NUP50-216ENST00000486184 GPHNQ9NQX3 736 aaPredicted RBP13.29□□□□□ -0.28
NUP50-216ENST00000486184 WBP1LQ9NX94 342 aa13.29□□□□□ -0.28
NUP50-216ENST00000486184 MYPNQ86TC9 1320 aa13.29□□□□□ -0.28
NUP50-216ENST00000486184 GOLGA8BA8MQT2 603 aa13.28□□□□□ -0.28
NUP50-216ENST00000486184 ZBTB43O43298 467 aa13.28□□□□□ -0.28
NUP50-216ENST00000486184 TLR2O60603 784 aa13.28□□□□□ -0.28
NUP50-216ENST00000486184 GOLGA8HP0CJ92 632 aa13.28□□□□□ -0.28
NUP50-216ENST00000486184 ZNF543Q08ER8 600 aa13.28□□□□□ -0.28
NUP50-216ENST00000486184 APOBRQ0VD83 1088 aa13.28□□□□□ -0.28
NUP50-216ENST00000486184 RABEP1Q15276 862 aa13.28□□□□□ -0.28
NUP50-216ENST00000486184 RASGRP2Q7LDG7 609 aa13.28□□□□□ -0.28
NUP50-216ENST00000486184 MICU3Q86XE3 530 aa13.28□□□□□ -0.28
NUP50-216ENST00000486184 PRPF38AQ8NAV1 312 aaKnown RBP13.28□□□□□ -0.28
NUP50-216ENST00000486184 KIFC2Q96AC6 838 aa13.28□□□□□ -0.28
NUP50-216ENST00000486184 IL17RAQ96F46 866 aa13.28□□□□□ -0.28
NUP50-216ENST00000486184 P2RX7Q99572 595 aaKnown RBP13.28□□□□□ -0.28
NUP50-216ENST00000486184 PAGR1Q9BTK6 254 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms