RNA–Protein interactions for RNA: ENST00000483868.5

TPRA1-208, Transcript of transmembrane protein adipocyte associated 1, human

TSL 5

Gene TPRA1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPRA1-208	ENST00000483868	MAD2L2	Q9UI95	211 aa		32.28	■■■□□ 2.76
TPRA1-208	ENST00000483868	NECAB1	Q8N987	351 aa		32.27	■■■□□ 2.76
TPRA1-208	ENST00000483868	TMOD4	Q9NZQ9	345 aa		32.27	■■■□□ 2.76
TPRA1-208	ENST00000483868	CDC27	P30260	824 aa		32.26	■■■□□ 2.76
TPRA1-208	ENST00000483868	GTF2A2	P52657	109 aa		32.26	■■■□□ 2.76
TPRA1-208	ENST00000483868	TTBK2	Q6IQ55	1244 aa		32.26	■■■□□ 2.76
TPRA1-208	ENST00000483868	FANCB	Q8NB91	859 aa		32.26	■■■□□ 2.76
TPRA1-208	ENST00000483868	BRI3BP	Q8WY22	251 aa		32.26	■■■□□ 2.76
TPRA1-208	ENST00000483868	LPAR1	Q92633	364 aa		32.26	■■■□□ 2.76
TPRA1-208	ENST00000483868	CPVL	Q9H3G5	476 aa		32.26	■■■□□ 2.76
TPRA1-208	ENST00000483868	DTNB	O60941	627 aa		32.26	■■■□□ 2.75
TPRA1-208	ENST00000483868	ZNF543	Q08ER8	600 aa		32.26	■■■□□ 2.75
TPRA1-208	ENST00000483868	GRM4	Q14833	912 aa		32.26	■■■□□ 2.75
TPRA1-208	ENST00000483868	CCDC96	Q2M329	555 aa		32.26	■■■□□ 2.75
TPRA1-208	ENST00000483868	DCAF4	Q8WV16	495 aa		32.26	■■■□□ 2.75
TPRA1-208	ENST00000483868	GPCPD1	Q9NPB8	672 aa		32.26	■■■□□ 2.75
TPRA1-208	ENST00000483868	GOLGA8A	A7E2F4	631 aa		32.25	■■■□□ 2.75
TPRA1-208	ENST00000483868	METAP2	P50579	478 aa	Known RBP eCLIP	32.25	■■■□□ 2.75
TPRA1-208	ENST00000483868	ST3GAL1	Q11201	340 aa		32.25	■■■□□ 2.75
TPRA1-208	ENST00000483868	CAPNS2	Q96L46	248 aa		32.25	■■■□□ 2.75
TPRA1-208	ENST00000483868	RPAP3	Q9H6T3	665 aa	Predicted RBP	32.25	■■■□□ 2.75
TPRA1-208	ENST00000483868	ISY1	Q9ULR0	285 aa	Known RBP	32.25	■■■□□ 2.75
TPRA1-208	ENST00000483868	LOC285556	D6RIA3	1793 aa		32.24	■■■□□ 2.75
TPRA1-208	ENST00000483868	CCL15-CCL14	A0A0B4J2E2	113 aa		32.24	■■■□□ 2.75
TPRA1-208	ENST00000483868	BMP3	P12645	472 aa		32.24	■■■□□ 2.75
TPRA1-208	ENST00000483868	ADD1	P35611	737 aa	Known RBP	32.24	■■■□□ 2.75
TPRA1-208	ENST00000483868	SCRN1	Q12765	414 aa		32.24	■■■□□ 2.75
TPRA1-208	ENST00000483868	CCL15	Q16663	113 aa		32.24	■■■□□ 2.75
TPRA1-208	ENST00000483868	GPAT2	Q6NUI2	795 aa		32.24	■■■□□ 2.75
TPRA1-208	ENST00000483868	CMTR1	Q8N1G2	835 aa	Known RBP	32.24	■■■□□ 2.75
TPRA1-208	ENST00000483868	PTPN18	Q99952	460 aa		32.24	■■■□□ 2.75
TPRA1-208	ENST00000483868	PALM3	A6NDB9	673 aa	Predicted RBP	32.23	■■■□□ 2.75
TPRA1-208	ENST00000483868	AOC2	O75106	756 aa		32.23	■■■□□ 2.75
TPRA1-208	ENST00000483868	PARP1	P09874	1014 aa	Known RBP	32.23	■■■□□ 2.75
TPRA1-208	ENST00000483868	NBPF11	Q86T75	865 aa		32.23	■■■□□ 2.75
TPRA1-208	ENST00000483868	PROCA1	Q8NCQ7	364 aa	Predicted RBP	32.23	■■■□□ 2.75
TPRA1-208	ENST00000483868	IL27	Q8NEV9	243 aa		32.23	■■■□□ 2.75
TPRA1-208	ENST00000483868	SNX21	Q969T3	373 aa		32.23	■■■□□ 2.75
TPRA1-208	ENST00000483868	TMX3	Q96JJ7	454 aa		32.23	■■■□□ 2.75
TPRA1-208	ENST00000483868	WDR46	O15213	610 aa	Known RBP	32.23	■■■□□ 2.75
TPRA1-208	ENST00000483868	PFKFB2	O60825	505 aa		32.23	■■■□□ 2.75
TPRA1-208	ENST00000483868	CALM1	P0DP23	149 aa		32.23	■■■□□ 2.75
TPRA1-208	ENST00000483868	CALM2	P0DP24	149 aa		32.23	■■■□□ 2.75
TPRA1-208	ENST00000483868	CALM3	P0DP25	149 aa		32.23	■■■□□ 2.75
TPRA1-208	ENST00000483868	CETP	P11597	493 aa		32.23	■■■□□ 2.75
TPRA1-208	ENST00000483868	RTN1	Q16799	776 aa		32.23	■■■□□ 2.75
TPRA1-208	ENST00000483868	SLC35G1	Q2M3R5	365 aa		32.23	■■■□□ 2.75
TPRA1-208	ENST00000483868	SLK	Q9H2G2	1235 aa	Predicted RBP	32.23	■■■□□ 2.75
TPRA1-208	ENST00000483868	FBXO28	Q9NVF7	368 aa		32.23	■■■□□ 2.75
TPRA1-208	ENST00000483868	BAZ2B	Q9UIF8	2168 aa	Known RBP	32.22	■■■□□ 2.75
TPRA1-208	ENST00000483868	PLEKHA8P1	O95397	391 aa		32.22	■■■□□ 2.75
TPRA1-208	ENST00000483868	HSPA6	P17066	643 aa		32.22	■■■□□ 2.75
TPRA1-208	ENST00000483868	SLC16A2	P36021	539 aa		32.22	■■■□□ 2.75
TPRA1-208	ENST00000483868	CTCFL	Q8NI51	663 aa	Predicted RBP	32.22	■■■□□ 2.75
TPRA1-208	ENST00000483868	MAP3K14	Q99558	947 aa		32.22	■■■□□ 2.75
TPRA1-208	ENST00000483868	UBA5	Q9GZZ9	404 aa		32.22	■■■□□ 2.75
TPRA1-208	ENST00000483868	RBM19	Q9Y4C8	960 aa	Known RBP	32.22	■■■□□ 2.75
TPRA1-208	ENST00000483868	MCM2	P49736	904 aa		32.21	■■■□□ 2.75
TPRA1-208	ENST00000483868	FASTKD5	Q7L8L6	764 aa	Known RBP	32.21	■■■□□ 2.75
TPRA1-208	ENST00000483868	NID2	Q14112	1375 aa		32.21	■■■□□ 2.75
TPRA1-208	ENST00000483868	TMEM232	C9JQI7	657 aa		32.2	■■■□□ 2.75
TPRA1-208	ENST00000483868	PPFIA3	O75145	1194 aa		32.2	■■■□□ 2.75
TPRA1-208	ENST00000483868	RCAN1	P53805	252 aa		32.2	■■■□□ 2.75
TPRA1-208	ENST00000483868	TANGO6	Q9C0B7	1094 aa		32.2	■■■□□ 2.75
TPRA1-208	ENST00000483868	BTBD19	C9JJ37	291 aa		32.2	■■■□□ 2.74
TPRA1-208	ENST00000483868	KLRF2	D3W0D1	207 aa		32.2	■■■□□ 2.74
TPRA1-208	ENST00000483868	VEGFB	P49765	207 aa		32.2	■■■□□ 2.74
TPRA1-208	ENST00000483868	ASPRV1	Q53RT3	343 aa		32.2	■■■□□ 2.74
TPRA1-208	ENST00000483868	CCDC82	Q8N4S0	544 aa		32.2	■■■□□ 2.74
TPRA1-208	ENST00000483868	AGTPBP1	Q9UPW5	1226 aa		32.2	■■■□□ 2.74
TPRA1-208	ENST00000483868	TESPA1	A2RU30	521 aa	Predicted RBP	32.19	■■■□□ 2.74
TPRA1-208	ENST00000483868	KIF23	Q02241	960 aa	Predicted RBP	32.19	■■■□□ 2.74
TPRA1-208	ENST00000483868	FAM43A	Q8N2R8	423 aa		32.19	■■■□□ 2.74
TPRA1-208	ENST00000483868	SRBD1	Q8N5C6	995 aa	Known RBP	32.19	■■■□□ 2.74
TPRA1-208	ENST00000483868	GTF3C6	Q969F1	213 aa		32.19	■■■□□ 2.74
TPRA1-208	ENST00000483868	GPATCH4	Q5T3I0	446 aa	Known RBP	32.18	■■■□□ 2.74
TPRA1-208	ENST00000483868	SAMD1	Q6SPF0	538 aa	Predicted RBP	32.18	■■■□□ 2.74
TPRA1-208	ENST00000483868	CATSPERG	Q6ZRH7	1159 aa		32.18	■■■□□ 2.74
TPRA1-208	ENST00000483868	CCDC83	Q8IWF9	413 aa		32.18	■■■□□ 2.74
TPRA1-208	ENST00000483868	ZSCAN31	Q96LW9	406 aa	Predicted RBP	32.18	■■■□□ 2.74
TPRA1-208	ENST00000483868	MANSC4	A6NHS7	340 aa	Predicted RBP	32.17	■■■□□ 2.74
TPRA1-208	ENST00000483868	KIF5B	P33176	963 aa		32.17	■■■□□ 2.74
TPRA1-208	ENST00000483868	TMTC3	Q6ZXV5	915 aa		32.17	■■■□□ 2.74
TPRA1-208	ENST00000483868	WDR33	Q9C0J8	1336 aa	Known RBP	32.17	■■■□□ 2.74
TPRA1-208	ENST00000483868	IGF2BP3	O00425	579 aa	Known RBP eCLIP	32.17	■■■□□ 2.74
TPRA1-208	ENST00000483868	CYTH3	O43739	400 aa		32.17	■■■□□ 2.74
TPRA1-208	ENST00000483868	SH2B1	Q9NRF2	756 aa	Predicted RBP	32.17	■■■□□ 2.74
TPRA1-208	ENST00000483868	USP17L15	C9J2P7	530 aa		32.16	■■■□□ 2.74
TPRA1-208	ENST00000483868	USP17L13	C9JLJ4	530 aa		32.16	■■■□□ 2.74
TPRA1-208	ENST00000483868	USP17L11	C9JVI0	530 aa		32.16	■■■□□ 2.74
TPRA1-208	ENST00000483868	USP17L18	D6R9N7	530 aa		32.16	■■■□□ 2.74
TPRA1-208	ENST00000483868	USP17L22	D6RA61	530 aa		32.16	■■■□□ 2.74
TPRA1-208	ENST00000483868	USP17L17	D6RBQ6	530 aa		32.16	■■■□□ 2.74
TPRA1-208	ENST00000483868	USP17L19	D6RCP7	530 aa		32.16	■■■□□ 2.74
TPRA1-208	ENST00000483868	USP17L20	D6RJB6	530 aa		32.16	■■■□□ 2.74
TPRA1-208	ENST00000483868		K7ELQ4	463 aa	Predicted RBP	32.16	■■■□□ 2.74
TPRA1-208	ENST00000483868	HOXA7	P31268	230 aa	Predicted RBP	32.16	■■■□□ 2.74
TPRA1-208	ENST00000483868	USP17L24	Q0WX57	530 aa		32.16	■■■□□ 2.74
TPRA1-208	ENST00000483868	NOG	Q13253	232 aa		32.16	■■■□□ 2.74
TPRA1-208	ENST00000483868	NTRK3	Q16288	839 aa		32.16	■■■□□ 2.74

Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms