RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-223ENST00000480525 TKFCQ3LXA3 575 aa5.98□□□□□ -1.45
HDAC6-223ENST00000480525 ASPRV1Q53RT3 343 aa5.98□□□□□ -1.45
HDAC6-223ENST00000480525 CREB3L3Q68CJ9 461 aa5.98□□□□□ -1.45
HDAC6-223ENST00000480525 RALYLQ86SE5 291 aaKnown RBP5.98□□□□□ -1.45
HDAC6-223ENST00000480525 TRMT44Q8IYL2 757 aaKnown RBP5.98□□□□□ -1.45
HDAC6-223ENST00000480525 PXYLP1Q8TE99 480 aa5.98□□□□□ -1.45
HDAC6-223ENST00000480525 SOCS4Q8WXH5 440 aa5.98□□□□□ -1.45
HDAC6-223ENST00000480525 ZSCAN10Q96SZ4 725 aaPredicted RBP5.98□□□□□ -1.45
HDAC6-223ENST00000480525 ZIC5Q96T25 663 aa5.98□□□□□ -1.45
HDAC6-223ENST00000480525 UBAC1Q9BSL1 405 aa5.98□□□□□ -1.45
HDAC6-223ENST00000480525 ASCC2Q9H1I8 757 aaPredicted RBP5.98□□□□□ -1.45
HDAC6-223ENST00000480525 MROH8Q9H579 483 aa5.98□□□□□ -1.45
HDAC6-223ENST00000480525 ANO2Q9NQ90 1003 aa5.98□□□□□ -1.45
HDAC6-223ENST00000480525 MAP3K20Q9NYL2 800 aaKnown RBP5.98□□□□□ -1.45
HDAC6-223ENST00000480525 ZSWIM5Q9P217 1185 aa5.98□□□□□ -1.45
HDAC6-223ENST00000480525 PPP1R9AQ9ULJ8 1098 aa5.98□□□□□ -1.45
HDAC6-223ENST00000480525 ERICH2A1L162 156 aa5.97□□□□□ -1.45
HDAC6-223ENST00000480525 SPDYE16A6NNV3 312 aaPredicted RBP5.97□□□□□ -1.45
HDAC6-223ENST00000480525 hCG_1984214I3L0E3 225 aa5.97□□□□□ -1.45
HDAC6-223ENST00000480525 MPHOSPH10O00566 681 aaKnown RBP5.97□□□□□ -1.45
HDAC6-223ENST00000480525 SLC27A2O14975 620 aa5.97□□□□□ -1.45
HDAC6-223ENST00000480525 RANBP6O60518 1105 aaKnown RBP5.97□□□□□ -1.45
HDAC6-223ENST00000480525 KDM4AO75164 1064 aa5.97□□□□□ -1.45
HDAC6-223ENST00000480525 TRPA1O75762 1119 aa5.97□□□□□ -1.45
HDAC6-223ENST00000480525 NDUFB10O96000 172 aa5.97□□□□□ -1.45
HDAC6-223ENST00000480525 IGHA2P01877 340 aa5.97□□□□□ -1.45
HDAC6-223ENST00000480525 PDHBP11177 359 aa5.97□□□□□ -1.45
HDAC6-223ENST00000480525 BMP3P12645 472 aa5.97□□□□□ -1.45
HDAC6-223ENST00000480525 HOXD10P28358 340 aa5.97□□□□□ -1.45
HDAC6-223ENST00000480525 DSG3P32926 999 aa5.97□□□□□ -1.45
HDAC6-223ENST00000480525 STAT2P52630 851 aa5.97□□□□□ -1.45
HDAC6-223ENST00000480525 EXOSC10Q01780 885 aaKnown RBP5.97□□□□□ -1.45
HDAC6-223ENST00000480525 EVX2Q03828 476 aa5.97□□□□□ -1.45
HDAC6-223ENST00000480525 CTDSPL2Q05D32 466 aa5.97□□□□□ -1.45
HDAC6-223ENST00000480525 TROAPQ12815 778 aa5.97□□□□□ -1.45
HDAC6-223ENST00000480525 KIF22Q14807 665 aa5.97□□□□□ -1.45
HDAC6-223ENST00000480525 TREML2Q5T2D2 321 aa5.97□□□□□ -1.45
HDAC6-223ENST00000480525 DHX32Q7L7V1 743 aaKnown RBP5.97□□□□□ -1.45
HDAC6-223ENST00000480525 CTU1Q7Z7A3 348 aaKnown RBP5.97□□□□□ -1.45
HDAC6-223ENST00000480525 MSL3Q8N5Y2 521 aaKnown RBP5.97□□□□□ -1.45
HDAC6-223ENST00000480525 ZNF713Q8N859 430 aaPredicted RBP5.97□□□□□ -1.45
HDAC6-223ENST00000480525 ENAHQ8N8S7 591 aaPredicted RBP5.97□□□□□ -1.45
HDAC6-223ENST00000480525 RGS22Q8NE09 1264 aa5.97□□□□□ -1.45
HDAC6-223ENST00000480525 REPS2Q8NFH8 660 aa5.97□□□□□ -1.45
HDAC6-223ENST00000480525 ACER1Q8TDN7 264 aa5.97□□□□□ -1.45
HDAC6-223ENST00000480525 IGDCC4Q8TDY8 1250 aa5.97□□□□□ -1.45
HDAC6-223ENST00000480525 SMCR8Q8TEV9 937 aaPredicted RBP5.97□□□□□ -1.45
HDAC6-223ENST00000480525 CHMP4CQ96CF2 233 aa5.97□□□□□ -1.45
HDAC6-223ENST00000480525 TMEM47Q9BQJ4 181 aa5.97□□□□□ -1.45
HDAC6-223ENST00000480525 LZTS2Q9BRK4 669 aa5.97□□□□□ -1.45
HDAC6-223ENST00000480525 USP26Q9BXU7 913 aa5.97□□□□□ -1.45
HDAC6-223ENST00000480525 BCL11AQ9H165 835 aa5.97□□□□□ -1.45
HDAC6-223ENST00000480525 SLC38A10Q9HBR0 1119 aa5.97□□□□□ -1.45
HDAC6-223ENST00000480525 RBM27Q9P2N5 1060 aaKnown RBP5.97□□□□□ -1.45
HDAC6-223ENST00000480525 FBXO40Q9UH90 709 aa5.97□□□□□ -1.45
HDAC6-223ENST00000480525 NRBP1Q9UHY1 535 aa5.97□□□□□ -1.45
HDAC6-223ENST00000480525 ZNF214Q9UL59 606 aaPredicted RBP5.97□□□□□ -1.45
HDAC6-223ENST00000480525 STX8Q9UNK0 236 aa5.97□□□□□ -1.45
HDAC6-223ENST00000480525 DIS3Q9Y2L1 958 aaKnown RBP5.97□□□□□ -1.45
HDAC6-223ENST00000480525 TACC3Q9Y6A5 838 aa5.97□□□□□ -1.45
HDAC6-223ENST00000480525 TNKSO95271 1327 aa5.97□□□□□ -1.45
HDAC6-223ENST00000480525 SMCHD1A6NHR9 2005 aa5.96□□□□□ -1.45
HDAC6-223ENST00000480525 B4E1Z4 1266 aa5.96□□□□□ -1.46
HDAC6-223ENST00000480525 SMIM22K7EJ46 135 aa5.96□□□□□ -1.46
HDAC6-223ENST00000480525 VWA5AO00534 786 aa5.96□□□□□ -1.46
HDAC6-223ENST00000480525 PRDM1O75626 825 aa5.96□□□□□ -1.46
HDAC6-223ENST00000480525 KIF5BP33176 963 aa5.96□□□□□ -1.46
HDAC6-223ENST00000480525 SLC1A4P43007 532 aa5.96□□□□□ -1.46
HDAC6-223ENST00000480525 RBM25P49756 843 aaKnown RBP5.96□□□□□ -1.46
HDAC6-223ENST00000480525 GNAQP50148 359 aa5.96□□□□□ -1.46
HDAC6-223ENST00000480525 FCGRTP55899 365 aa5.96□□□□□ -1.46
HDAC6-223ENST00000480525 ERVK-9P63128 1117 aa5.96□□□□□ -1.46
HDAC6-223ENST00000480525 ERVK-24P63145 666 aa5.96□□□□□ -1.46
HDAC6-223ENST00000480525 ZNF543Q08ER8 600 aa5.96□□□□□ -1.46
HDAC6-223ENST00000480525 IFIT1BQ5T764 474 aaKnown RBP5.96□□□□□ -1.46
HDAC6-223ENST00000480525 FBXO46Q6PJ61 603 aaPredicted RBP5.96□□□□□ -1.46
HDAC6-223ENST00000480525 GADL1Q6ZQY3 521 aa5.96□□□□□ -1.46
HDAC6-223ENST00000480525 ZNF467Q7Z7K2 595 aaPredicted RBP5.96□□□□□ -1.46
HDAC6-223ENST00000480525 RIOX2Q8IUF8 465 aa5.96□□□□□ -1.46
HDAC6-223ENST00000480525 PNMA1Q8ND90 353 aa5.96□□□□□ -1.46
HDAC6-223ENST00000480525 CHST13Q8NET6 341 aa5.96□□□□□ -1.46
HDAC6-223ENST00000480525 GPRC5AQ8NFJ5 357 aa5.96□□□□□ -1.46
HDAC6-223ENST00000480525 ZNF296Q8WUU4 475 aaPredicted RBP5.96□□□□□ -1.46
HDAC6-223ENST00000480525 USP6NLQ92738 828 aa5.96□□□□□ -1.46
HDAC6-223ENST00000480525 MTMR8Q96EF0 704 aa5.96□□□□□ -1.46
HDAC6-223ENST00000480525 NEK1Q96PY6 1258 aa5.96□□□□□ -1.46
HDAC6-223ENST00000480525 SLF1Q9BQI6 1058 aa5.96□□□□□ -1.46
HDAC6-223ENST00000480525 SPZ1Q9BXG8 430 aa5.96□□□□□ -1.46
HDAC6-223ENST00000480525 TEX13BQ9BXU2 312 aa5.96□□□□□ -1.46
HDAC6-223ENST00000480525 RPAP3Q9H6T3 665 aaPredicted RBP5.96□□□□□ -1.46
HDAC6-223ENST00000480525 ZSWIM6Q9HCJ5 1215 aa5.96□□□□□ -1.46
HDAC6-223ENST00000480525 RBPJLQ9UBG7 517 aa5.96□□□□□ -1.46
HDAC6-223ENST00000480525 CLIP2Q9UDT6 1046 aa5.96□□□□□ -1.46
HDAC6-223ENST00000480525 BAZ2BQ9UIF8 2168 aaKnown RBP5.96□□□□□ -1.46
HDAC6-223ENST00000480525 LCTP09848 1927 aa5.95□□□□□ -1.46
HDAC6-223ENST00000480525 FRMPD3Q5JV73 1810 aa5.95□□□□□ -1.46
HDAC6-223ENST00000480525 CCDC196A0A1B0GTZ2 297 aa5.95□□□□□ -1.46
HDAC6-223ENST00000480525 PALM3A6NDB9 673 aaPredicted RBP5.95□□□□□ -1.46
HDAC6-223ENST00000480525 SLC15A5A6NIM6 579 aa5.95□□□□□ -1.46
HDAC6-223ENST00000480525 SH2B2O14492 632 aaPredicted RBP5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms