RNA–Protein interactions for RNA: ENST00000480353.5

CDK9-203, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 706 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-203ENST00000480353 A0A0G2JMZ2 1700 aa18.21■□□□□ 0.51
CDK9-203ENST00000480353 TSPY2A6NKD2 308 aa18.21■□□□□ 0.51
CDK9-203ENST00000480353 STRNO43815 780 aa18.21■□□□□ 0.51
CDK9-203ENST00000480353 TTLL1O95922 423 aa18.21■□□□□ 0.51
CDK9-203ENST00000480353 ERCC3P19447 782 aa18.21■□□□□ 0.51
CDK9-203ENST00000480353 TFAP4Q01664 338 aa18.21■□□□□ 0.51
CDK9-203ENST00000480353 TICAM2Q86XR7 235 aa18.21■□□□□ 0.51
CDK9-203ENST00000480353 SHCBP1Q8NEM2 672 aa18.21■□□□□ 0.51
CDK9-203ENST00000480353 MROH8Q9H579 483 aa18.21■□□□□ 0.51
CDK9-203ENST00000480353 RLFQ13129 1914 aa18.21■□□□□ 0.51
CDK9-203ENST00000480353 F5H6K3 240 aa18.2■□□□□ 0.5
CDK9-203ENST00000480353 SLC25A27O95847 323 aa18.2■□□□□ 0.5
CDK9-203ENST00000480353 IRX6P78412 446 aaPredicted RBP18.2■□□□□ 0.5
CDK9-203ENST00000480353 CTDSPL2Q05D32 466 aa18.2■□□□□ 0.5
CDK9-203ENST00000480353 KLRC3Q07444 240 aa18.2■□□□□ 0.5
CDK9-203ENST00000480353 GRB14Q14449 540 aa18.2■□□□□ 0.5
CDK9-203ENST00000480353 CCL14Q16627 93 aa18.2■□□□□ 0.5
CDK9-203ENST00000480353 FAM47AQ5JRC9 791 aa18.2■□□□□ 0.5
CDK9-203ENST00000480353 USP6NLQ92738 828 aa18.2■□□□□ 0.5
CDK9-203ENST00000480353 CEP95Q96GE4 821 aa18.2■□□□□ 0.5
CDK9-203ENST00000480353 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.2■□□□□ 0.5
CDK9-203ENST00000480353 FCER1AP12319 257 aa18.19■□□□□ 0.5
CDK9-203ENST00000480353 ADORA2AP29274 412 aa18.19■□□□□ 0.5
CDK9-203ENST00000480353 CNGA1P29973 690 aa18.19■□□□□ 0.5
CDK9-203ENST00000480353 COPB2P35606 906 aa18.19■□□□□ 0.5
CDK9-203ENST00000480353 CACNB2Q08289 660 aaPredicted RBP18.19■□□□□ 0.5
CDK9-203ENST00000480353 IKQ13123 557 aaPredicted RBP18.19■□□□□ 0.5
CDK9-203ENST00000480353 NMIQ13287 307 aaPredicted RBP18.19■□□□□ 0.5
CDK9-203ENST00000480353 NECAB2Q7Z6G3 386 aa18.19■□□□□ 0.5
CDK9-203ENST00000480353 NEDD1Q8NHV4 660 aa18.19■□□□□ 0.5
CDK9-203ENST00000480353 FAM227BQ96M60 508 aa18.19■□□□□ 0.5
CDK9-203ENST00000480353 SLF1Q9BQI6 1058 aa18.19■□□□□ 0.5
CDK9-203ENST00000480353 DIAPH3Q9NSV4 1193 aa18.19■□□□□ 0.5
CDK9-203ENST00000480353 FBXO28Q9NVF7 368 aa18.19■□□□□ 0.5
CDK9-203ENST00000480353 MTMR4Q9NYA4 1195 aa18.19■□□□□ 0.5
CDK9-203ENST00000480353 PPP1R9AQ9ULJ8 1098 aa18.19■□□□□ 0.5
CDK9-203ENST00000480353 BRCA2P51587 3418 aa18.18■□□□□ 0.5
CDK9-203ENST00000480353 ZNFX1Q9P2E3 1918 aaKnown RBP18.18■□□□□ 0.5
CDK9-203ENST00000480353 A0A0D9SFI3 127 aa18.18■□□□□ 0.5
CDK9-203ENST00000480353 HIP1O00291 1037 aa18.18■□□□□ 0.5
CDK9-203ENST00000480353 RANBP6O60518 1105 aaKnown RBP18.18■□□□□ 0.5
CDK9-203ENST00000480353 NDUFB10O96000 172 aa18.18■□□□□ 0.5
CDK9-203ENST00000480353 SLC4A3P48751 1232 aa18.18■□□□□ 0.5
CDK9-203ENST00000480353 PLEKHM2Q8IWE5 1019 aa18.18■□□□□ 0.5
CDK9-203ENST00000480353 LRRC47Q8N1G4 583 aaKnown RBP18.18■□□□□ 0.5
CDK9-203ENST00000480353 ANKLE1Q8NAG6 615 aa18.18■□□□□ 0.5
CDK9-203ENST00000480353 NUP88Q99567 741 aaPredicted RBP18.18■□□□□ 0.5
CDK9-203ENST00000480353 STX8Q9UNK0 236 aa18.18■□□□□ 0.5
CDK9-203ENST00000480353 NR2E3Q9Y5X4 410 aa18.18■□□□□ 0.5
CDK9-203ENST00000480353 VWA5AO00534 786 aa18.17■□□□□ 0.5
CDK9-203ENST00000480353 ZBED4O75132 1171 aa18.17■□□□□ 0.5
CDK9-203ENST00000480353 STAT3P40763 770 aa18.17■□□□□ 0.5
CDK9-203ENST00000480353 KCTD2Q14681 263 aa18.17■□□□□ 0.5
CDK9-203ENST00000480353 TMEM132BQ14DG7 1078 aa18.17■□□□□ 0.5
CDK9-203ENST00000480353 RRP12Q5JTH9 1297 aaKnown RBP18.17■□□□□ 0.5
CDK9-203ENST00000480353 VPS53Q5VIR6 699 aa18.17■□□□□ 0.5
CDK9-203ENST00000480353 PRPF38AQ8NAV1 312 aaKnown RBP18.17■□□□□ 0.5
CDK9-203ENST00000480353 KIFC2Q96AC6 838 aa18.17■□□□□ 0.5
CDK9-203ENST00000480353 PAWRQ96IZ0 340 aaKnown RBP18.17■□□□□ 0.5
CDK9-203ENST00000480353 MMP19Q99542 508 aa18.17■□□□□ 0.5
CDK9-203ENST00000480353 CRISPLD2Q9H0B8 497 aa18.17■□□□□ 0.5
CDK9-203ENST00000480353 SYNPO2Q9UMS6 1093 aa18.17■□□□□ 0.5
CDK9-203ENST00000480353 CCDC171Q6TFL3 1326 aa18.17■□□□□ 0.5
CDK9-203ENST00000480353 PLIN4Q96Q06 1357 aa18.17■□□□□ 0.5
CDK9-203ENST00000480353 ZNF236Q9UL36 1845 aa18.16■□□□□ 0.5
CDK9-203ENST00000480353 IGKV6D-41A0A0C4DH26 115 aa18.16■□□□□ 0.5
CDK9-203ENST00000480353 EVI5O60447 810 aa18.16■□□□□ 0.5
CDK9-203ENST00000480353 HOXC6P09630 235 aa18.16■□□□□ 0.5
CDK9-203ENST00000480353 SDSP20132 328 aa18.16■□□□□ 0.5
CDK9-203ENST00000480353 CCND3P30281 292 aaPredicted RBP18.16■□□□□ 0.5
CDK9-203ENST00000480353 ALX1Q15699 326 aa18.16■□□□□ 0.5
CDK9-203ENST00000480353 MAP3K21Q5TCX8 1036 aa18.16■□□□□ 0.5
CDK9-203ENST00000480353 SLFN13Q68D06 897 aa18.16■□□□□ 0.5
CDK9-203ENST00000480353 ABRAQ8N0Z2 381 aa18.16■□□□□ 0.5
CDK9-203ENST00000480353 MKL1Q969V6 931 aa18.16■□□□□ 0.5
CDK9-203ENST00000480353 NBPF3Q9H094 633 aa18.16■□□□□ 0.5
CDK9-203ENST00000480353 OSBPL3Q9H4L5 887 aa18.16■□□□□ 0.5
CDK9-203ENST00000480353 FEM1BQ9UK73 627 aa18.16■□□□□ 0.5
CDK9-203ENST00000480353 HSPD1P10809 573 aaKnown RBP18.15■□□□□ 0.5
CDK9-203ENST00000480353 BMP3P12645 472 aa18.15■□□□□ 0.5
CDK9-203ENST00000480353 RIOX2Q8IUF8 465 aa18.15■□□□□ 0.5
CDK9-203ENST00000480353 GMCL1P1Q8NEA9 526 aa18.15■□□□□ 0.5
CDK9-203ENST00000480353 NPLOC4Q8TAT6 608 aa18.15■□□□□ 0.5
CDK9-203ENST00000480353 ANAPC4Q9UJX5 808 aa18.15■□□□□ 0.5
CDK9-203ENST00000480353 MSCO60682 206 aa18.14■□□□□ 0.49
CDK9-203ENST00000480353 FGAP02671 866 aa18.14■□□□□ 0.49
CDK9-203ENST00000480353 CYP2C19P33261 490 aa18.14■□□□□ 0.49
CDK9-203ENST00000480353 SLC1A4P43007 532 aa18.14■□□□□ 0.49
CDK9-203ENST00000480353 SNRNP48Q6IEG0 339 aaKnown RBP18.14■□□□□ 0.49
CDK9-203ENST00000480353 CWC27Q6UX04 472 aaKnown RBP18.14■□□□□ 0.49
CDK9-203ENST00000480353 CPXCR1Q8N123 301 aa18.14■□□□□ 0.49
CDK9-203ENST00000480353 CHMP4CQ96CF2 233 aa18.14■□□□□ 0.49
CDK9-203ENST00000480353 TEX13BQ9BXU2 312 aa18.14■□□□□ 0.49
CDK9-203ENST00000480353 C11orf49Q9H6J7 331 aa18.14■□□□□ 0.49
CDK9-203ENST00000480353 FLRT1Q9NZU1 646 aa18.14■□□□□ 0.49
CDK9-203ENST00000480353 ADAMTS5Q9UNA0 930 aa18.14■□□□□ 0.49
CDK9-203ENST00000480353 MTMR7Q9Y216 660 aa18.14■□□□□ 0.49
CDK9-203ENST00000480353 PLXNA1Q9UIW2 1896 aa18.14■□□□□ 0.49
CDK9-203ENST00000480353 TMEM232C9JQI7 657 aa18.13■□□□□ 0.49
CDK9-203ENST00000480353 H0YGN5 161 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms