RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-238	ENST00000479894	ACER1	Q8TDN7	264 aa		18.88	■□□□□ 0.61
HDLBP-238	ENST00000479894	SERPINB13	Q9UIV8	391 aa		18.88	■□□□□ 0.61
HDLBP-238	ENST00000479894	COL11A1	P12107	1806 aa	Predicted RBP	18.87	■□□□□ 0.61
HDLBP-238	ENST00000479894	BMP1	P13497	986 aa		18.87	■□□□□ 0.61
HDLBP-238	ENST00000479894	PBX2	P40425	430 aa		18.87	■□□□□ 0.61
HDLBP-238	ENST00000479894	RAB30	Q15771	203 aa		18.87	■□□□□ 0.61
HDLBP-238	ENST00000479894	AAK1	Q2M2I8	961 aa		18.87	■□□□□ 0.61
HDLBP-238	ENST00000479894	ABCB5	Q2M3G0	1257 aa		18.87	■□□□□ 0.61
HDLBP-238	ENST00000479894	CERKL	Q49MI3	558 aa	Predicted RBP	18.87	■□□□□ 0.61
HDLBP-238	ENST00000479894	TMEM240	Q5SV17	173 aa		18.87	■□□□□ 0.61
HDLBP-238	ENST00000479894	ADGRA1	Q86SQ6	560 aa		18.87	■□□□□ 0.61
HDLBP-238	ENST00000479894	CERS3	Q8IU89	383 aa		18.87	■□□□□ 0.61
HDLBP-238	ENST00000479894	CABP5	Q9NP86	173 aa		18.87	■□□□□ 0.61
HDLBP-238	ENST00000479894	SAP30BP	Q9UHR5	308 aa	Known RBP	18.87	■□□□□ 0.61
HDLBP-238	ENST00000479894	TBX21	Q9UL17	535 aa		18.87	■□□□□ 0.61
HDLBP-238	ENST00000479894	REV3L	O60673	3130 aa		18.87	■□□□□ 0.61
HDLBP-238	ENST00000479894	SRGAP3	O43295	1099 aa		18.86	■□□□□ 0.61
HDLBP-238	ENST00000479894	ATP8B2	P98198	1209 aa		18.86	■□□□□ 0.61
HDLBP-238	ENST00000479894	NUP133	Q8WUM0	1156 aa		18.86	■□□□□ 0.61
HDLBP-238	ENST00000479894	CRBN	Q96SW2	442 aa		18.86	■□□□□ 0.61
HDLBP-238	ENST00000479894	STARD7	Q9NQZ5	370 aa		18.86	■□□□□ 0.61
HDLBP-238	ENST00000479894	MSRA	Q9UJ68	235 aa		18.86	■□□□□ 0.61
HDLBP-238	ENST00000479894	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	18.86	■□□□□ 0.61
HDLBP-238	ENST00000479894	MUC6	Q6W4X9	2439 aa		18.85	■□□□□ 0.61
HDLBP-238	ENST00000479894	MROH7	Q68CQ1	1323 aa		18.85	■□□□□ 0.61
HDLBP-238	ENST00000479894	MOXD2P	A6NHM9	499 aa		18.85	■□□□□ 0.61
HDLBP-238	ENST00000479894	PGK1	P00558	417 aa		18.85	■□□□□ 0.61
HDLBP-238	ENST00000479894	IGFBP4	P22692	258 aa		18.85	■□□□□ 0.61
HDLBP-238	ENST00000479894	CCDC85B	Q15834	202 aa	Predicted RBP	18.85	■□□□□ 0.61
HDLBP-238	ENST00000479894	PSRC1	Q6PGN9	363 aa	Predicted RBP	18.85	■□□□□ 0.61
HDLBP-238	ENST00000479894	C16orf59	Q7L2K0	433 aa		18.85	■□□□□ 0.61
HDLBP-238	ENST00000479894	MYH8	P13535	1937 aa		18.84	■□□□□ 0.61
HDLBP-238	ENST00000479894	GRXCR1	A8MXD5	290 aa		18.84	■□□□□ 0.61
HDLBP-238	ENST00000479894	ADAMTS4	O75173	837 aa		18.84	■□□□□ 0.61
HDLBP-238	ENST00000479894	FCER1A	P12319	257 aa		18.84	■□□□□ 0.61
HDLBP-238	ENST00000479894	AKR1A1	P14550	325 aa		18.84	■□□□□ 0.61
HDLBP-238	ENST00000479894	HSP90AB4P	Q58FF6	505 aa		18.84	■□□□□ 0.61
HDLBP-238	ENST00000479894	TTC6	Q86TZ1	520 aa		18.84	■□□□□ 0.61
HDLBP-238	ENST00000479894	LRFN3	Q9BTN0	628 aa		18.84	■□□□□ 0.61
HDLBP-238	ENST00000479894	DIS3	Q9Y2L1	958 aa	Known RBP	18.84	■□□□□ 0.61
HDLBP-238	ENST00000479894	XIRP2	A4UGR9	3374 aa		18.84	■□□□□ 0.61
HDLBP-238	ENST00000479894	DSG3	P32926	999 aa		18.83	■□□□□ 0.6
HDLBP-238	ENST00000479894	ACLY	P53396	1101 aa		18.83	■□□□□ 0.6
HDLBP-238	ENST00000479894	NCAPG2	Q86XI2	1143 aa		18.83	■□□□□ 0.6
HDLBP-238	ENST00000479894	TMEM199	Q8N511	208 aa		18.83	■□□□□ 0.6
HDLBP-238	ENST00000479894	TINF2	Q9BSI4	451 aa		18.83	■□□□□ 0.6
HDLBP-238	ENST00000479894	TRANK1	O15050	2925 aa		18.82	■□□□□ 0.6
HDLBP-238	ENST00000479894	ELP1	O95163	1332 aa		18.82	■□□□□ 0.6
HDLBP-238	ENST00000479894	SLC25A27	O95847	323 aa		18.82	■□□□□ 0.6
HDLBP-238	ENST00000479894	GUCY1A2	P33402	732 aa		18.82	■□□□□ 0.6
HDLBP-238	ENST00000479894	ERICH6B	Q5W0A0	696 aa		18.82	■□□□□ 0.6
HDLBP-238	ENST00000479894	NECAB3	Q96P71	396 aa	Predicted RBP	18.82	■□□□□ 0.6
HDLBP-238	ENST00000479894	SLC28A3	Q9HAS3	691 aa		18.82	■□□□□ 0.6
HDLBP-238	ENST00000479894	PRRC2B	Q5JSZ5	2229 aa	Known RBP	18.82	■□□□□ 0.6
HDLBP-238	ENST00000479894	CYP2E1	P05181	493 aa	Predicted RBP	18.81	■□□□□ 0.6
HDLBP-238	ENST00000479894	CEP85	Q6P2H3	762 aa		18.81	■□□□□ 0.6
HDLBP-238	ENST00000479894	KLHDC9	Q8NEP7	349 aa		18.81	■□□□□ 0.6
HDLBP-238	ENST00000479894	SSH3	Q8TE77	659 aa		18.81	■□□□□ 0.6
HDLBP-238	ENST00000479894	HERVK_113	Q902F9	699 aa		18.81	■□□□□ 0.6
HDLBP-238	ENST00000479894	TANGO6	Q9C0B7	1094 aa		18.81	■□□□□ 0.6
HDLBP-238	ENST00000479894	MTIF3	Q9H2K0	278 aa	Known RBP	18.81	■□□□□ 0.6
HDLBP-238	ENST00000479894	NAV1	Q8NEY1	1877 aa		18.8	■□□□□ 0.6
HDLBP-238	ENST00000479894	ZNF865	P0CJ78	1059 aa	Predicted RBP	18.8	■□□□□ 0.6
HDLBP-238	ENST00000479894	CSF2RA	P15509	400 aa		18.8	■□□□□ 0.6
HDLBP-238	ENST00000479894	SHMT1	P34896	483 aa		18.8	■□□□□ 0.6
HDLBP-238	ENST00000479894	USP5	P45974	858 aa		18.8	■□□□□ 0.6
HDLBP-238	ENST00000479894	CDK7	P50613	346 aa		18.8	■□□□□ 0.6
HDLBP-238	ENST00000479894	DYNLL1	P63167	89 aa	Known RBP	18.8	■□□□□ 0.6
HDLBP-238	ENST00000479894	PLS1	Q14651	629 aa		18.8	■□□□□ 0.6
HDLBP-238	ENST00000479894	TMEM31	Q5JXX7	168 aa		18.8	■□□□□ 0.6
HDLBP-238	ENST00000479894	CCSAP	Q6IQ19	270 aa	Predicted RBP	18.8	■□□□□ 0.6
HDLBP-238	ENST00000479894	ZNF365	Q70YC5	407 aa		18.8	■□□□□ 0.6
HDLBP-238	ENST00000479894	ZNF512B	Q96KM6	892 aa	Predicted RBP	18.8	■□□□□ 0.6
HDLBP-238	ENST00000479894	C1orf115	Q9H7X2	142 aa		18.8	■□□□□ 0.6
HDLBP-238	ENST00000479894	SNRK	Q9NRH2	765 aa		18.8	■□□□□ 0.6
HDLBP-238	ENST00000479894	ERC2	O15083	957 aa		18.79	■□□□□ 0.6
HDLBP-238	ENST00000479894	G3BP1	Q13283	466 aa	Known RBP eCLIP	18.79	■□□□□ 0.6	2e-15	■□□□□ 9.8
HDLBP-238	ENST00000479894	POLA2	Q14181	598 aa		18.79	■□□□□ 0.6
HDLBP-238	ENST00000479894	ZNF792	Q3KQV3	632 aa		18.79	■□□□□ 0.6
HDLBP-238	ENST00000479894	CCDC158	Q5M9N0	1113 aa		18.79	■□□□□ 0.6
HDLBP-238	ENST00000479894	TTC39A	Q5SRH9	613 aa		18.79	■□□□□ 0.6
HDLBP-238	ENST00000479894	GLT1D1	Q96MS3	346 aa		18.79	■□□□□ 0.6
HDLBP-238	ENST00000479894	EPHX3	Q9H6B9	360 aa		18.79	■□□□□ 0.6
HDLBP-238	ENST00000479894	GPR108	Q9NPR9	543 aa		18.79	■□□□□ 0.6
HDLBP-238	ENST00000479894	SYNRG	Q9UMZ2	1314 aa		18.78	■□□□□ 0.6
HDLBP-238	ENST00000479894	LRRC37A2	A6NM11	1700 aa		18.78	■□□□□ 0.6
HDLBP-238	ENST00000479894		A0A1W2PRG0	241 aa		18.78	■□□□□ 0.6
HDLBP-238	ENST00000479894	CST5	P28325	142 aa	Predicted RBP	18.78	■□□□□ 0.6
HDLBP-238	ENST00000479894	SEPT2	Q15019	361 aa		18.78	■□□□□ 0.6
HDLBP-238	ENST00000479894	KCNA10	Q16322	511 aa		18.78	■□□□□ 0.6
HDLBP-238	ENST00000479894	TMED8	Q6PL24	325 aa	Predicted RBP	18.78	■□□□□ 0.6
HDLBP-238	ENST00000479894	ERC1	Q8IUD2	1116 aa		18.78	■□□□□ 0.6
HDLBP-238	ENST00000479894	MSL3	Q8N5Y2	521 aa	Known RBP	18.78	■□□□□ 0.6
HDLBP-238	ENST00000479894	EXOC6	Q8TAG9	804 aa		18.78	■□□□□ 0.6
HDLBP-238	ENST00000479894	MMP19	Q99542	508 aa		18.78	■□□□□ 0.6
HDLBP-238	ENST00000479894	NKX2-4	Q9H2Z4	354 aa		18.78	■□□□□ 0.6
HDLBP-238	ENST00000479894	RWDD1	Q9H446	243 aa	Predicted RBP	18.78	■□□□□ 0.6
HDLBP-238	ENST00000479894	IL23A	Q9NPF7	189 aa		18.78	■□□□□ 0.6
HDLBP-238	ENST00000479894	CNPY2	Q9Y2B0	182 aa		18.78	■□□□□ 0.6
HDLBP-238	ENST00000479894	MCM3AP	O60318	1980 aa		18.77	■□□□□ 0.6

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