RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 SAMD1Q6SPF0 538 aaPredicted RBP19.48■□□□□ 0.71
DDX56-210ENST00000479440 ANKRD33Q7Z3H0 272 aa19.48■□□□□ 0.71
DDX56-210ENST00000479440 SPICE1Q8N0Z3 855 aa19.48■□□□□ 0.71
DDX56-210ENST00000479440 USP38Q8NB14 1042 aa19.48■□□□□ 0.71
DDX56-210ENST00000479440 NUP133Q8WUM0 1156 aa19.48■□□□□ 0.71
DDX56-210ENST00000479440 TOX2Q96NM4 488 aa19.48■□□□□ 0.71
DDX56-210ENST00000479440 GAS2L1Q99501 681 aaPredicted RBP19.48■□□□□ 0.71
DDX56-210ENST00000479440 TINF2Q9BSI4 451 aa19.48■□□□□ 0.71
DDX56-210ENST00000479440 TSEN34Q9BSV6 310 aaKnown RBP19.48■□□□□ 0.71
DDX56-210ENST00000479440 ZNF576Q9H609 170 aa19.48■□□□□ 0.71
DDX56-210ENST00000479440 STARD7Q9NQZ5 370 aa19.48■□□□□ 0.71
DDX56-210ENST00000479440 TMX2Q9Y320 296 aa19.48■□□□□ 0.71
DDX56-210ENST00000479440 MOXD2PA6NHM9 499 aa19.47■□□□□ 0.71
DDX56-210ENST00000479440 COL9A1P20849 921 aa19.47■□□□□ 0.71
DDX56-210ENST00000479440 TMEM132BQ14DG7 1078 aa19.47■□□□□ 0.71
DDX56-210ENST00000479440 KIAA1755Q5JYT7 1200 aa19.47■□□□□ 0.71
DDX56-210ENST00000479440 ZKSCAN2Q63HK3 967 aa19.47■□□□□ 0.71
DDX56-210ENST00000479440 ERC1Q8IUD2 1116 aa19.47■□□□□ 0.71
DDX56-210ENST00000479440 C1orf115Q9H7X2 142 aa19.47■□□□□ 0.71
DDX56-210ENST00000479440 CNPY2Q9Y2B0 182 aa19.47■□□□□ 0.71
DDX56-210ENST00000479440 MROH7Q68CQ1 1323 aa19.47■□□□□ 0.71
DDX56-210ENST00000479440 ADAMTS4O75173 837 aa19.46■□□□□ 0.71
DDX56-210ENST00000479440 AACSQ86V21 672 aa19.46■□□□□ 0.71
DDX56-210ENST00000479440 RIOX2Q8IUF8 465 aa19.46■□□□□ 0.71
DDX56-210ENST00000479440 SLC44A5Q8NCS7 719 aa19.46■□□□□ 0.71
DDX56-210ENST00000479440 DCP1AQ9NPI6 582 aaPredicted RBP19.46■□□□□ 0.71
DDX56-210ENST00000479440 PARP14Q460N5 1801 aa19.46■□□□□ 0.71
DDX56-210ENST00000479440 PGK2P07205 417 aa19.45■□□□□ 0.7
DDX56-210ENST00000479440 PDE6AP16499 860 aa19.45■□□□□ 0.7
DDX56-210ENST00000479440 ACLYP53396 1101 aa19.45■□□□□ 0.7
DDX56-210ENST00000479440 FAAP100Q0VG06 881 aa19.45■□□□□ 0.7
DDX56-210ENST00000479440 PPIGQ13427 754 aaKnown RBP eCLIP19.45■□□□□ 0.76e-7■■□□□ 13.5
DDX56-210ENST00000479440 ZNF792Q3KQV3 632 aa19.45■□□□□ 0.7
DDX56-210ENST00000479440 SLC9C2Q5TAH2 1124 aa19.45■□□□□ 0.7
DDX56-210ENST00000479440 SDR42E1Q8WUS8 393 aa19.45■□□□□ 0.7
DDX56-210ENST00000479440 SYNRGQ9UMZ2 1314 aa19.45■□□□□ 0.7
DDX56-210ENST00000479440 PRUNE2Q8WUY3 3088 aa19.44■□□□□ 0.7
DDX56-210ENST00000479440 TIMP1P01033 207 aa19.44■□□□□ 0.7
DDX56-210ENST00000479440 ZNF865P0CJ78 1059 aaPredicted RBP19.44■□□□□ 0.7
DDX56-210ENST00000479440 AKR1B1P15121 316 aa19.44■□□□□ 0.7
DDX56-210ENST00000479440 EVX2Q03828 476 aa19.44■□□□□ 0.7
DDX56-210ENST00000479440 CLEC10AQ8IUN9 316 aa19.44■□□□□ 0.7
DDX56-210ENST00000479440 AMOTL1Q8IY63 956 aa19.44■□□□□ 0.7
DDX56-210ENST00000479440 FTSJ3Q8IY81 847 aaKnown RBP19.44■□□□□ 0.7
DDX56-210ENST00000479440 MSL3Q8N5Y2 521 aaKnown RBP19.44■□□□□ 0.7
DDX56-210ENST00000479440 ATXN2LQ8WWM7 1075 aaKnown RBP19.44■□□□□ 0.7
DDX56-210ENST00000479440 CCDC17Q96LX7 622 aa19.44■□□□□ 0.7
DDX56-210ENST00000479440 THEGQ9P2T0 379 aa19.44■□□□□ 0.7
DDX56-210ENST00000479440 MYH8P13535 1937 aa19.44■□□□□ 0.7
DDX56-210ENST00000479440 CYP2D6P10635 497 aa19.43■□□□□ 0.7
DDX56-210ENST00000479440 TAL1P17542 331 aaPredicted RBP19.43■□□□□ 0.7
DDX56-210ENST00000479440 CCDC129Q6ZRS4 1044 aa19.43■□□□□ 0.7
DDX56-210ENST00000479440 LCORLQ8N3X6 602 aa19.43■□□□□ 0.7
DDX56-210ENST00000479440 LENG1Q96BZ8 264 aaPredicted RBP19.43■□□□□ 0.7
DDX56-210ENST00000479440 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.43■□□□□ 0.71e-7■■■□□ 15.9
DDX56-210ENST00000479440 TBX21Q9UL17 535 aa19.43■□□□□ 0.7
DDX56-210ENST00000479440 FAM184BQ9ULE4 1060 aa19.43■□□□□ 0.7
DDX56-210ENST00000479440 ADAMTS5Q9UNA0 930 aa19.43■□□□□ 0.7
DDX56-210ENST00000479440 SYNGAP1Q96PV0 1343 aa19.43■□□□□ 0.7
DDX56-210ENST00000479440 ZNF532Q9HCE3 1301 aa19.43■□□□□ 0.7
DDX56-210ENST00000479440 PLXNA1Q9UIW2 1896 aa19.42■□□□□ 0.7
DDX56-210ENST00000479440 STAT3P40763 770 aa19.42■□□□□ 0.7
DDX56-210ENST00000479440 AKNAD1Q5T1N1 836 aa19.42■□□□□ 0.7
DDX56-210ENST00000479440 MFSD5Q6N075 450 aa19.42■□□□□ 0.7
DDX56-210ENST00000479440 PSRC1Q6PGN9 363 aaPredicted RBP19.42■□□□□ 0.7
DDX56-210ENST00000479440 ITPRIPQ8IWB1 547 aa19.42■□□□□ 0.7
DDX56-210ENST00000479440 GLT1D1Q96MS3 346 aa19.42■□□□□ 0.7
DDX56-210ENST00000479440 GOPCQ9HD26 462 aa19.42■□□□□ 0.7
DDX56-210ENST00000479440 ZNF214Q9UL59 606 aaPredicted RBP19.42■□□□□ 0.7
DDX56-210ENST00000479440 PPP1R9AQ9ULJ8 1098 aa19.42■□□□□ 0.7
DDX56-210ENST00000479440 COL11A1P12107 1806 aaPredicted RBP19.41■□□□□ 0.7
DDX56-210ENST00000479440 VWA5AO00534 786 aa19.41■□□□□ 0.7
DDX56-210ENST00000479440 KLHDC9Q8NEP7 349 aa19.41■□□□□ 0.7
DDX56-210ENST00000479440 IL27Q8NEV9 243 aa19.41■□□□□ 0.7
DDX56-210ENST00000479440 DYNLL2Q96FJ2 89 aa19.41■□□□□ 0.7
DDX56-210ENST00000479440 PBX4Q9BYU1 374 aa19.41■□□□□ 0.7
DDX56-210ENST00000479440 ZHX1Q9UKY1 873 aaPredicted RBP19.41■□□□□ 0.7
DDX56-210ENST00000479440 ELP1O95163 1332 aa19.41■□□□□ 0.7
DDX56-210ENST00000479440 CST5P28325 142 aaPredicted RBP19.4■□□□□ 0.7
DDX56-210ENST00000479440 KCNA10Q16322 511 aa19.4■□□□□ 0.7
DDX56-210ENST00000479440 HSP90AB4PQ58FF6 505 aa19.4■□□□□ 0.7
DDX56-210ENST00000479440 SIAH1Q8IUQ4 282 aa19.4■□□□□ 0.7
DDX56-210ENST00000479440 TMEM199Q8N511 208 aa19.4■□□□□ 0.7
DDX56-210ENST00000479440 PPM1EQ8WY54 764 aa19.4■□□□□ 0.7
DDX56-210ENST00000479440 DDRGK1Q96HY6 314 aa19.4■□□□□ 0.7
DDX56-210ENST00000479440 SPC25Q9HBM1 224 aa19.4■□□□□ 0.7
DDX56-210ENST00000479440 ATP8A2Q9NTI2 1148 aa19.4■□□□□ 0.7
DDX56-210ENST00000479440 FBXO28Q9NVF7 368 aa19.4■□□□□ 0.7
DDX56-210ENST00000479440 EXOC6BQ9Y2D4 811 aa19.4■□□□□ 0.7
DDX56-210ENST00000479440 TCRBV5S4A2TA0A5A2 114 aa19.39■□□□□ 0.69
DDX56-210ENST00000479440 APBB1O00213 710 aa19.39■□□□□ 0.69
DDX56-210ENST00000479440 GOLIM4O00461 696 aa19.39■□□□□ 0.69
DDX56-210ENST00000479440 EEF2P13639 858 aaKnown RBP19.39■□□□□ 0.69
DDX56-210ENST00000479440 RAB30Q15771 203 aa19.39■□□□□ 0.69
DDX56-210ENST00000479440 TMEM240Q5SV17 173 aa19.39■□□□□ 0.69
DDX56-210ENST00000479440 CEP85Q6P2H3 762 aa19.39■□□□□ 0.69
DDX56-210ENST00000479440 PCSK9Q8NBP7 692 aaKnown RBP19.39■□□□□ 0.69
DDX56-210ENST00000479440 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.39■□□□□ 0.69
DDX56-210ENST00000479440 ASB2Q96Q27 587 aa19.39■□□□□ 0.69
DDX56-210ENST00000479440 DNAJC2Q99543 621 aaKnown RBP19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms