RNA–Protein interactions for RNA: ENST00000479364.1

NFIA-210, Transcript of nuclear factor I A, human

TSL 5

Gene NFIA, Length 1,010 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NFIA-210	ENST00000479364	MAN1B1	Q9UKM7	699 aa		13.79	□□□□□ -0.2
NFIA-210	ENST00000479364	PYCARD	Q9ULZ3	195 aa		13.79	□□□□□ -0.2
NFIA-210	ENST00000479364	RGPD3	A6NKT7	1758 aa	Predicted RBP	13.78	□□□□□ -0.2
NFIA-210	ENST00000479364	RGPD4	Q7Z3J3	1758 aa		13.78	□□□□□ -0.2
NFIA-210	ENST00000479364	CDK5RAP2	Q96SN8	1893 aa		13.78	□□□□□ -0.2
NFIA-210	ENST00000479364	USP17L3	A6NCW0	530 aa		13.78	□□□□□ -0.2
NFIA-210	ENST00000479364	USP17L4	A6NCW7	530 aa		13.78	□□□□□ -0.2
NFIA-210	ENST00000479364	KLRF2	D3W0D1	207 aa		13.78	□□□□□ -0.2
NFIA-210	ENST00000479364	CCP110	O43303	1012 aa		13.78	□□□□□ -0.2
NFIA-210	ENST00000479364	NPM3	O75607	178 aa	Known RBP	13.78	□□□□□ -0.2
NFIA-210	ENST00000479364	ATP2B1	P20020	1258 aa		13.78	□□□□□ -0.2
NFIA-210	ENST00000479364	PRPH	P41219	470 aa		13.78	□□□□□ -0.2
NFIA-210	ENST00000479364	ZNF174	Q15697	407 aa		13.78	□□□□□ -0.2
NFIA-210	ENST00000479364	GRIPAP1	Q4V328	841 aa		13.78	□□□□□ -0.2
NFIA-210	ENST00000479364	CC2D2B	Q6DHV5	1058 aa		13.78	□□□□□ -0.2
NFIA-210	ENST00000479364	PIK3AP1	Q6ZUJ8	805 aa		13.78	□□□□□ -0.2
NFIA-210	ENST00000479364	USP17L1	Q7RTZ2	530 aa		13.78	□□□□□ -0.2
NFIA-210	ENST00000479364	COL23A1	Q86Y22	540 aa	Predicted RBP	13.78	□□□□□ -0.2
NFIA-210	ENST00000479364	FOXP4	Q8IVH2	680 aa	Predicted RBP	13.78	□□□□□ -0.2
NFIA-210	ENST00000479364	CCDC112	Q8NEF3	446 aa		13.78	□□□□□ -0.2
NFIA-210	ENST00000479364	CACTIN	Q8WUQ7	758 aa	Known RBP	13.78	□□□□□ -0.2
NFIA-210	ENST00000479364	ERCC4	Q92889	916 aa	Predicted RBP	13.78	□□□□□ -0.2
NFIA-210	ENST00000479364	CCDC17	Q96LX7	622 aa		13.78	□□□□□ -0.2
NFIA-210	ENST00000479364	GPR101	Q96P66	508 aa	Predicted RBP	13.78	□□□□□ -0.2
NFIA-210	ENST00000479364	ZMYND12	Q9H0C1	365 aa		13.78	□□□□□ -0.2
NFIA-210	ENST00000479364	RMND1	Q9NWS8	449 aa		13.78	□□□□□ -0.2
NFIA-210	ENST00000479364	IFNK	Q9P0W0	207 aa		13.78	□□□□□ -0.2
NFIA-210	ENST00000479364	SEC63	Q9UGP8	760 aa	Known RBP	13.78	□□□□□ -0.2
NFIA-210	ENST00000479364	STX8	Q9UNK0	236 aa		13.78	□□□□□ -0.2
NFIA-210	ENST00000479364	SNED1	Q8TER0	1413 aa		13.78	□□□□□ -0.2
NFIA-210	ENST00000479364	ANKRD31	Q8N7Z5	1873 aa		13.78	□□□□□ -0.2
NFIA-210	ENST00000479364	MYH1	P12882	1939 aa		13.78	□□□□□ -0.2
NFIA-210	ENST00000479364		M0R2N6	131 aa		13.77	□□□□□ -0.21
NFIA-210	ENST00000479364	STXBP3	O00186	592 aa		13.77	□□□□□ -0.21
NFIA-210	ENST00000479364	APBA3	O96018	575 aa		13.77	□□□□□ -0.21
NFIA-210	ENST00000479364	SERPINC1	P01008	464 aa		13.77	□□□□□ -0.21
NFIA-210	ENST00000479364	HLA-DOA	P06340	250 aa		13.77	□□□□□ -0.21
NFIA-210	ENST00000479364	UBASH3A	P57075	661 aa		13.77	□□□□□ -0.21
NFIA-210	ENST00000479364	EVX2	Q03828	476 aa		13.77	□□□□□ -0.21
NFIA-210	ENST00000479364	GABPA	Q06546	454 aa		13.77	□□□□□ -0.21
NFIA-210	ENST00000479364	SOGA3	Q5TF21	947 aa		13.77	□□□□□ -0.21
NFIA-210	ENST00000479364	MYRIP	Q8NFW9	859 aa		13.77	□□□□□ -0.21
NFIA-210	ENST00000479364	SYMPK	Q92797	1274 aa	Known RBP	13.77	□□□□□ -0.21
NFIA-210	ENST00000479364	TEKT1	Q969V4	418 aa		13.77	□□□□□ -0.21
NFIA-210	ENST00000479364	AK8	Q96MA6	479 aa		13.77	□□□□□ -0.21
NFIA-210	ENST00000479364	XPO4	Q9C0E2	1151 aa	Known RBP	13.77	□□□□□ -0.21
NFIA-210	ENST00000479364	EHD4	Q9H223	541 aa		13.77	□□□□□ -0.21
NFIA-210	ENST00000479364	CUEDC2	Q9H467	287 aa		13.77	□□□□□ -0.21
NFIA-210	ENST00000479364	MAGEF1	Q9HAY2	307 aa		13.77	□□□□□ -0.21
NFIA-210	ENST00000479364	NRBP1	Q9UHY1	535 aa		13.77	□□□□□ -0.21
NFIA-210	ENST00000479364	hCG_1642624	A0A1W2PR95	340 aa		13.76	□□□□□ -0.21
NFIA-210	ENST00000479364	SKIL	P12757	684 aa		13.76	□□□□□ -0.21
NFIA-210	ENST00000479364	SFPQ	P23246	707 aa	Known RBP eCLIP	13.76	□□□□□ -0.21	1e-6	■■■□□ 15.1
NFIA-210	ENST00000479364	HOXA7	P31268	230 aa	Predicted RBP	13.76	□□□□□ -0.21
NFIA-210	ENST00000479364	GTF2F1	P35269	517 aa	Known RBP eCLIP	13.76	□□□□□ -0.21	9e-7	■■■■■ 27.6
NFIA-210	ENST00000479364	GRIN1	Q05586	938 aa		13.76	□□□□□ -0.21
NFIA-210	ENST00000479364	ZNF827	Q17R98	1081 aa		13.76	□□□□□ -0.21
NFIA-210	ENST00000479364	CCDC144B	Q3MJ40	725 aa		13.76	□□□□□ -0.21
NFIA-210	ENST00000479364	EARS2	Q5JPH6	523 aa	Known RBP	13.76	□□□□□ -0.21
NFIA-210	ENST00000479364	PPP1R18	Q6NYC8	613 aa		13.76	□□□□□ -0.21
NFIA-210	ENST00000479364	MTERF4	Q7Z6M4	381 aa	Known RBP	13.76	□□□□□ -0.21
NFIA-210	ENST00000479364	STAG2	Q8N3U4	1231 aa		13.76	□□□□□ -0.21
NFIA-210	ENST00000479364	FBXW7	Q969H0	707 aa		13.76	□□□□□ -0.21
NFIA-210	ENST00000479364	DHX58	Q96C10	678 aa		13.76	□□□□□ -0.21
NFIA-210	ENST00000479364	PAGE5	Q96GU1	130 aa		13.76	□□□□□ -0.21
NFIA-210	ENST00000479364	DHX36	Q9H2U1	1008 aa	Known RBP	13.76	□□□□□ -0.21
NFIA-210	ENST00000479364	TTF2	Q9UNY4	1162 aa	Known RBP	13.76	□□□□□ -0.21
NFIA-210	ENST00000479364	PAXBP1	Q9Y5B6	917 aa		13.76	□□□□□ -0.21
NFIA-210	ENST00000479364	IGKV6D-41	A0A0C4DH26	115 aa		13.75	□□□□□ -0.21
NFIA-210	ENST00000479364	VWA3A	A6NCI4	1184 aa		13.75	□□□□□ -0.21
NFIA-210	ENST00000479364		H0YIN7	160 aa		13.75	□□□□□ -0.21
NFIA-210	ENST00000479364	GTPBP6	O43824	516 aa	Predicted RBP	13.75	□□□□□ -0.21
NFIA-210	ENST00000479364	MMP10	P09238	476 aa		13.75	□□□□□ -0.21
NFIA-210	ENST00000479364	LMOD1	P29536	600 aa	Predicted RBP	13.75	□□□□□ -0.21
NFIA-210	ENST00000479364	DPYD	Q12882	1025 aa		13.75	□□□□□ -0.21
NFIA-210	ENST00000479364	SPECC1	Q5M775	1068 aa		13.75	□□□□□ -0.21
NFIA-210	ENST00000479364	STRIP1	Q5VSL9	837 aa		13.75	□□□□□ -0.21
NFIA-210	ENST00000479364	WWC2	Q6AWC2	1192 aa		13.75	□□□□□ -0.21
NFIA-210	ENST00000479364	DTHD1	Q6ZMT9	781 aa		13.75	□□□□□ -0.21
NFIA-210	ENST00000479364	HEATR3	Q7Z4Q2	680 aa		13.75	□□□□□ -0.21
NFIA-210	ENST00000479364	FILIP1	Q7Z7B0	1213 aa		13.75	□□□□□ -0.21
NFIA-210	ENST00000479364	SLC44A5	Q8NCS7	719 aa		13.75	□□□□□ -0.21
NFIA-210	ENST00000479364	SUPT20H	Q8NEM7	779 aa		13.75	□□□□□ -0.21
NFIA-210	ENST00000479364	CNKSR1	Q969H4	720 aa		13.75	□□□□□ -0.21
NFIA-210	ENST00000479364	ZDHHC15	Q96MV8	337 aa		13.75	□□□□□ -0.21
NFIA-210	ENST00000479364	CTAGE1	Q96RT6	745 aa		13.75	□□□□□ -0.21
NFIA-210	ENST00000479364	MAP7D2	Q96T17	732 aa		13.75	□□□□□ -0.21
NFIA-210	ENST00000479364	GLT8D2	Q9H1C3	349 aa		13.75	□□□□□ -0.21
NFIA-210	ENST00000479364	RIOX1	Q9H6W3	641 aa		13.75	□□□□□ -0.21
NFIA-210	ENST00000479364	USP40	Q9NVE5	1235 aa		13.75	□□□□□ -0.21
NFIA-210	ENST00000479364	MTMR4	Q9NYA4	1195 aa		13.75	□□□□□ -0.21
NFIA-210	ENST00000479364	SERPINB13	Q9UIV8	391 aa		13.75	□□□□□ -0.21
NFIA-210	ENST00000479364	PCDHA6	Q9UN73	950 aa		13.75	□□□□□ -0.21
NFIA-210	ENST00000479364	PCDHA8	Q9Y5H6	950 aa		13.75	□□□□□ -0.21
NFIA-210	ENST00000479364	UQCRHL	A0A096LP55	91 aa		13.74	□□□□□ -0.21
NFIA-210	ENST00000479364	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	13.74	□□□□□ -0.21
NFIA-210	ENST00000479364	PSD	A5PKW4	1024 aa	Predicted RBP	13.74	□□□□□ -0.21
NFIA-210	ENST00000479364	FAM205C	A6NFA0	338 aa		13.74	□□□□□ -0.21
NFIA-210	ENST00000479364	RIMBP2	O15034	1052 aa		13.74	□□□□□ -0.21
NFIA-210	ENST00000479364	CYTH3	O43739	400 aa		13.74	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms