RNA–Protein interactions for RNA: ENST00000478085.5

SGSM3-209, Transcript of small G protein signaling modulator 3, humanhuman

TSL 2

Gene SGSM3, Length 4,218 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGSM3-209ENST00000478085 FOXP4Q8IVH2 680 aaPredicted RBP13.34□□□□□ -0.27
SGSM3-209ENST00000478085 TMEM47Q9BQJ4 181 aa13.34□□□□□ -0.27
SGSM3-209ENST00000478085 RTEL1Q9NZ71 1219 aa13.34□□□□□ -0.27
SGSM3-209ENST00000478085 NFE2L3Q9Y4A8 694 aa13.34□□□□□ -0.27
SGSM3-209ENST00000478085 KIF5CO60282 957 aa13.33□□□□□ -0.28
SGSM3-209ENST00000478085 HS2ST1Q7LGA3 356 aa13.33□□□□□ -0.28
SGSM3-209ENST00000478085 ZBTB12Q9Y330 459 aaPredicted RBP13.33□□□□□ -0.28
SGSM3-209ENST00000478085 B4DLN1 442 aa13.33□□□□□ -0.28
SGSM3-209ENST00000478085 UBXN2AP68543 259 aa13.33□□□□□ -0.28
SGSM3-209ENST00000478085 UBXN1Q04323 297 aa13.33□□□□□ -0.28
SGSM3-209ENST00000478085 VPS36Q86VN1 386 aa13.33□□□□□ -0.28
SGSM3-209ENST00000478085 CCDC65Q8IXS2 484 aa13.33□□□□□ -0.28
SGSM3-209ENST00000478085 CTNND2Q9UQB3 1225 aa13.33□□□□□ -0.28
SGSM3-209ENST00000478085 MMP1P03956 469 aa13.33□□□□□ -0.28
SGSM3-209ENST00000478085 SNAP25P60880 206 aa13.33□□□□□ -0.28
SGSM3-209ENST00000478085 ASPRV1Q53RT3 343 aa13.33□□□□□ -0.28
SGSM3-209ENST00000478085 AMNQ9BXJ7 453 aa13.33□□□□□ -0.28
SGSM3-209ENST00000478085 LY9Q9HBG7 655 aa13.33□□□□□ -0.28
SGSM3-209ENST00000478085 HAUS3Q68CZ6 603 aa13.32□□□□□ -0.28
SGSM3-209ENST00000478085 TXLNBQ8N3L3 684 aa13.32□□□□□ -0.28
SGSM3-209ENST00000478085 CEP95Q96GE4 821 aa13.32□□□□□ -0.28
SGSM3-209ENST00000478085 FOXP1Q9H334 677 aaPredicted RBP13.32□□□□□ -0.28
SGSM3-209ENST00000478085 PLEKHG2Q9H7P9 1386 aa13.32□□□□□ -0.28
SGSM3-209ENST00000478085 LINC00301Q8NCQ3 95 aa13.32□□□□□ -0.28
SGSM3-209ENST00000478085 EEF2KMTQ96G04 330 aa13.32□□□□□ -0.28
SGSM3-209ENST00000478085 IFT172Q9UG01 1749 aa13.32□□□□□ -0.28
SGSM3-209ENST00000478085 WTIPA6NIX2 430 aaPredicted RBP13.32□□□□□ -0.28
SGSM3-209ENST00000478085 BMP3P12645 472 aa13.32□□□□□ -0.28
SGSM3-209ENST00000478085 RESTQ13127 1097 aa13.32□□□□□ -0.28
SGSM3-209ENST00000478085 SKIDA1Q1XH10 827 aa13.32□□□□□ -0.28
SGSM3-209ENST00000478085 TSGA10IPQ3SY00 556 aa13.32□□□□□ -0.28
SGSM3-209ENST00000478085 TPH2Q8IWU9 490 aa13.32□□□□□ -0.28
SGSM3-209ENST00000478085 SMCR8Q8TEV9 937 aaPredicted RBP13.32□□□□□ -0.28
SGSM3-209ENST00000478085 RCOR1Q9UKL0 485 aa13.32□□□□□ -0.28
SGSM3-209ENST00000478085 RPAP1Q9BWH6 1393 aaPredicted RBP13.32□□□□□ -0.28
SGSM3-209ENST00000478085 ADGRB2O60241 1585 aa13.32□□□□□ -0.28
SGSM3-209ENST00000478085 SEPT2Q15019 361 aa13.31□□□□□ -0.28
SGSM3-209ENST00000478085 CCDC150Q8NCX0 1101 aa13.31□□□□□ -0.28
SGSM3-209ENST00000478085 PPP1R9BQ96SB3 815 aa13.31□□□□□ -0.28
SGSM3-209ENST00000478085 DNM3Q9UQ16 869 aa13.31□□□□□ -0.28
SGSM3-209ENST00000478085 PCDHB6Q9Y5E3 794 aa13.31□□□□□ -0.28
SGSM3-209ENST00000478085 TESPA1A2RU30 521 aaPredicted RBP13.31□□□□□ -0.28
SGSM3-209ENST00000478085 GNG11P61952 73 aa13.31□□□□□ -0.28
SGSM3-209ENST00000478085 SLC10A5Q5PT55 438 aa13.31□□□□□ -0.28
SGSM3-209ENST00000478085 UBXN4Q92575 508 aa13.31□□□□□ -0.28
SGSM3-209ENST00000478085 CSRNP2Q9H175 543 aa13.31□□□□□ -0.28
SGSM3-209ENST00000478085 SCAF8Q9UPN6 1271 aaKnown RBP13.31□□□□□ -0.28
SGSM3-209ENST00000478085 ABCC12Q96J65 1359 aa13.31□□□□□ -0.28
SGSM3-209ENST00000478085 PNPLA7Q6ZV29 1317 aa13.31□□□□□ -0.28
SGSM3-209ENST00000478085 BICDL2A1A5D9 508 aa13.31□□□□□ -0.28
SGSM3-209ENST00000478085 PRPF3O43395 683 aaKnown RBP13.31□□□□□ -0.28
SGSM3-209ENST00000478085 CEP135Q66GS9 1140 aa13.31□□□□□ -0.28
SGSM3-209ENST00000478085 MLKLQ8NB16 471 aa13.31□□□□□ -0.28
SGSM3-209ENST00000478085 RUFY1Q96T51 708 aa13.31□□□□□ -0.28
SGSM3-209ENST00000478085 CCPG1Q9ULG6 757 aa13.31□□□□□ -0.28
SGSM3-209ENST00000478085 ZDHHC9Q9Y397 364 aa13.31□□□□□ -0.28
SGSM3-209ENST00000478085 USP17L5A8MUK1 530 aa13.31□□□□□ -0.28
SGSM3-209ENST00000478085 SORBS3O60504 671 aa13.31□□□□□ -0.28
SGSM3-209ENST00000478085 OR52Z1P0C646 297 aa13.31□□□□□ -0.28
SGSM3-209ENST00000478085 NLRP12P59046 1061 aa13.31□□□□□ -0.28
SGSM3-209ENST00000478085 EXOSC10Q01780 885 aaKnown RBP13.31□□□□□ -0.28
SGSM3-209ENST00000478085 CSGALNACT2Q8N6G5 542 aa13.31□□□□□ -0.28
SGSM3-209ENST00000478085 ZNF512BQ96KM6 892 aaPredicted RBP13.31□□□□□ -0.28
SGSM3-209ENST00000478085 DAGLAQ9Y4D2 1042 aa13.31□□□□□ -0.28
SGSM3-209ENST00000478085 IVNS1ABPQ9Y6Y0 642 aa13.31□□□□□ -0.28
SGSM3-209ENST00000478085 RFX7Q2KHR2 1363 aa13.3□□□□□ -0.28
SGSM3-209ENST00000478085 NOLC1Q14978 699 aaKnown RBP eCLIP13.3□□□□□ -0.283e-6■□□□□ 8.5
SGSM3-209ENST00000478085 KARSQ15046 597 aaKnown RBP13.3□□□□□ -0.28
SGSM3-209ENST00000478085 ZNF771Q7L3S4 317 aaPredicted RBP13.3□□□□□ -0.28
SGSM3-209ENST00000478085 NELFCDQ8IXH7 590 aa13.3□□□□□ -0.28
SGSM3-209ENST00000478085 TBCKQ8TEA7 893 aa13.3□□□□□ -0.28
SGSM3-209ENST00000478085 ZNF526Q8TF50 670 aaPredicted RBP13.3□□□□□ -0.28
SGSM3-209ENST00000478085 SYMPKQ92797 1274 aaKnown RBP13.3□□□□□ -0.28
SGSM3-209ENST00000478085 VTI1AQ96AJ9 217 aa13.3□□□□□ -0.28
SGSM3-209ENST00000478085 AS3MTQ9HBK9 375 aa13.3□□□□□ -0.28
SGSM3-209ENST00000478085 PCDHA5Q9Y5H7 936 aa13.3□□□□□ -0.28
SGSM3-209ENST00000478085 TNS2Q63HR2 1409 aa13.3□□□□□ -0.28
SGSM3-209ENST00000478085 USO1O60763 962 aaKnown RBP13.3□□□□□ -0.28
SGSM3-209ENST00000478085 GAS7O60861 476 aa13.3□□□□□ -0.28
SGSM3-209ENST00000478085 KRT13P13646 458 aa13.3□□□□□ -0.28
SGSM3-209ENST00000478085 NOP2P46087 812 aaKnown RBP13.3□□□□□ -0.28
SGSM3-209ENST00000478085 CYP4A11Q02928 519 aa13.3□□□□□ -0.28
SGSM3-209ENST00000478085 SNW1Q13573 536 aaKnown RBP13.3□□□□□ -0.28
SGSM3-209ENST00000478085 C12orf60Q5U649 245 aa13.3□□□□□ -0.28
SGSM3-209ENST00000478085 GADL1Q6ZQY3 521 aa13.3□□□□□ -0.28
SGSM3-209ENST00000478085 POLR3EQ9NVU0 708 aa13.3□□□□□ -0.28
SGSM3-209ENST00000478085 PCDHA4Q9UN74 947 aa13.3□□□□□ -0.28
SGSM3-209ENST00000478085 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.3□□□□□ -0.282e-9■□□□□ 10.5
SGSM3-209ENST00000478085 ARHGEF35A5YM69 484 aa13.3□□□□□ -0.28
SGSM3-209ENST00000478085 CCDC169A6NNP5 214 aa13.3□□□□□ -0.28
SGSM3-209ENST00000478085 GCOM1H8Y6P7 765 aaPredicted RBP13.3□□□□□ -0.28
SGSM3-209ENST00000478085 POLR2MP0CAP2 368 aa13.3□□□□□ -0.28
SGSM3-209ENST00000478085 FANCCQ00597 558 aa13.3□□□□□ -0.28
SGSM3-209ENST00000478085 TMTC3Q6ZXV5 915 aa13.3□□□□□ -0.28
SGSM3-209ENST00000478085 TAF4BQ92750 862 aa13.3□□□□□ -0.28
SGSM3-209ENST00000478085 EPB41L4AQ9HCS5 686 aaPredicted RBP13.3□□□□□ -0.28
SGSM3-209ENST00000478085 MRPL11Q9Y3B7 192 aaKnown RBP13.3□□□□□ -0.28
SGSM3-209ENST00000478085 TBC1D8BQ0IIM8 1120 aa13.29□□□□□ -0.28
SGSM3-209ENST00000478085 HSP90B2PQ58FF3 399 aa13.29□□□□□ -0.28
SGSM3-209ENST00000478085 FAM212AQ96EL1 285 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms