RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 GLIPR1L2Q4G1C9 344 aa3.46□□□□□ -1.86
HMGN4-202ENST00000477243 ARHGAP29Q52LW3 1261 aa3.46□□□□□ -1.86
HMGN4-202ENST00000477243 CCDC92Q53HC0 331 aaPredicted RBP3.46□□□□□ -1.86
HMGN4-202ENST00000477243 IER5Q5VY09 327 aa3.46□□□□□ -1.86
HMGN4-202ENST00000477243 TSHZ3Q63HK5 1081 aa3.46□□□□□ -1.86
HMGN4-202ENST00000477243 MSL1Q68DK7 614 aa3.46□□□□□ -1.86
HMGN4-202ENST00000477243 KANK3Q6NY19 840 aa3.46□□□□□ -1.86
HMGN4-202ENST00000477243 TPTE2Q6XPS3 522 aa3.46□□□□□ -1.86
HMGN4-202ENST00000477243 GK5Q6ZS86 529 aa3.46□□□□□ -1.86
HMGN4-202ENST00000477243 RSRC2Q7L4I2 434 aaKnown RBP3.46□□□□□ -1.86
HMGN4-202ENST00000477243 MAATS1Q7Z4T9 603 aa3.46□□□□□ -1.86
HMGN4-202ENST00000477243 TRIM22Q8IYM9 498 aa3.46□□□□□ -1.86
HMGN4-202ENST00000477243 GLIS3Q8NEA6 775 aa3.46□□□□□ -1.86
HMGN4-202ENST00000477243 VPS37AQ8NEZ2 397 aa3.46□□□□□ -1.86
HMGN4-202ENST00000477243 TIFAQ96CG3 184 aa3.46□□□□□ -1.86
HMGN4-202ENST00000477243 FMNL2Q96PY5 1086 aa3.46□□□□□ -1.86
HMGN4-202ENST00000477243 SYT17Q9BSW7 474 aa3.46□□□□□ -1.86
HMGN4-202ENST00000477243 NIFKQ9BYG3 293 aaKnown RBP3.46□□□□□ -1.86
HMGN4-202ENST00000477243 SLC13A1Q9BZW2 595 aa3.46□□□□□ -1.86
HMGN4-202ENST00000477243 IFT22Q9H7X7 185 aa3.46□□□□□ -1.86
HMGN4-202ENST00000477243 EHMT1Q9H9B1 1298 aa3.46□□□□□ -1.86
HMGN4-202ENST00000477243 BRMS1Q9HCU9 246 aa3.46□□□□□ -1.86
HMGN4-202ENST00000477243 DDX21Q9NR30 783 aaKnown RBP eCLIP3.46□□□□□ -1.86
HMGN4-202ENST00000477243 RASSF1Q9NS23 344 aa3.46□□□□□ -1.86
HMGN4-202ENST00000477243 PHTF1Q9UMS5 762 aa3.46□□□□□ -1.86
HMGN4-202ENST00000477243 DMTF1Q9Y222 760 aa3.46□□□□□ -1.86
HMGN4-202ENST00000477243 GIT1Q9Y2X7 761 aa3.46□□□□□ -1.86
HMGN4-202ENST00000477243 TTLL3Q9Y4R7 772 aa3.46□□□□□ -1.86
HMGN4-202ENST00000477243 CTDP1Q9Y5B0 961 aaPredicted RBP3.46□□□□□ -1.86
HMGN4-202ENST00000477243 GRIN2AQ12879 1464 aa3.46□□□□□ -1.86
HMGN4-202ENST00000477243 TNKSO95271 1327 aa3.45□□□□□ -1.86
HMGN4-202ENST00000477243 AFF2P51816 1311 aa3.45□□□□□ -1.86
HMGN4-202ENST00000477243 CNTNAP5Q8WYK1 1306 aa3.45□□□□□ -1.86
HMGN4-202ENST00000477243 ARHGEF40Q8TER5 1519 aa3.45□□□□□ -1.86
HMGN4-202ENST00000477243 TRBV23-1A0A0A0MS06 115 aa3.45□□□□□ -1.86
HMGN4-202ENST00000477243 TRAV20A0A0B4J274 112 aa3.45□□□□□ -1.86
HMGN4-202ENST00000477243 ABHD14A-ACY1A0A1B0GW23 586 aa3.45□□□□□ -1.86
HMGN4-202ENST00000477243 K7ENM7 598 aa3.45□□□□□ -1.86
HMGN4-202ENST00000477243 ARHGAP33O14559 1287 aa3.45□□□□□ -1.86
HMGN4-202ENST00000477243 APAF1O14727 1248 aa3.45□□□□□ -1.86
HMGN4-202ENST00000477243 KHNYNO15037 678 aaKnown RBP3.45□□□□□ -1.86
HMGN4-202ENST00000477243 DDX3YO15523 660 aaKnown RBP3.45□□□□□ -1.86
HMGN4-202ENST00000477243 GRIN3BO60391 1043 aa3.45□□□□□ -1.86
HMGN4-202ENST00000477243 HOXB3P14651 431 aaPredicted RBP3.45□□□□□ -1.86
HMGN4-202ENST00000477243 TFE3P19532 575 aaPredicted RBP3.45□□□□□ -1.86
HMGN4-202ENST00000477243 GUCY2CP25092 1073 aa3.45□□□□□ -1.86
HMGN4-202ENST00000477243 SERPINB3P29508 390 aa3.45□□□□□ -1.86
HMGN4-202ENST00000477243 L1CAMP32004 1257 aa3.45□□□□□ -1.86
HMGN4-202ENST00000477243 RECQLP46063 649 aaPredicted RBP3.45□□□□□ -1.86
HMGN4-202ENST00000477243 FAM193AP78312 1265 aa3.45□□□□□ -1.86
HMGN4-202ENST00000477243 HSP90AA2PQ14568 343 aaPredicted RBP3.45□□□□□ -1.86
HMGN4-202ENST00000477243 KIF22Q14807 665 aa3.45□□□□□ -1.86
HMGN4-202ENST00000477243 TAF11Q15544 211 aa3.45□□□□□ -1.86
HMGN4-202ENST00000477243 PTPN21Q16825 1174 aa3.45□□□□□ -1.86
HMGN4-202ENST00000477243 LONRF1Q17RB8 773 aa3.45□□□□□ -1.86
HMGN4-202ENST00000477243 LINC01559Q495D7 138 aa3.45□□□□□ -1.86
HMGN4-202ENST00000477243 WDR45BQ5MNZ6 344 aa3.45□□□□□ -1.86
HMGN4-202ENST00000477243 PDXDC1Q6P996 788 aa3.45□□□□□ -1.86
HMGN4-202ENST00000477243 REC114Q7Z4M0 266 aa3.45□□□□□ -1.86
HMGN4-202ENST00000477243 SRLQ86TD4 932 aa3.45□□□□□ -1.86
HMGN4-202ENST00000477243 TTC6Q86TZ1 520 aa3.45□□□□□ -1.86
HMGN4-202ENST00000477243 SAPCD2Q86UD0 394 aa3.45□□□□□ -1.86
HMGN4-202ENST00000477243 RASSF3Q86WH2 238 aa3.45□□□□□ -1.86
HMGN4-202ENST00000477243 TPH2Q8IWU9 490 aa3.45□□□□□ -1.86
HMGN4-202ENST00000477243 CMTR1Q8N1G2 835 aaKnown RBP3.45□□□□□ -1.86
HMGN4-202ENST00000477243 FAM43AQ8N2R8 423 aa3.45□□□□□ -1.86
HMGN4-202ENST00000477243 TTC30BQ8N4P2 665 aa3.45□□□□□ -1.86
HMGN4-202ENST00000477243 NKAPQ8N5F7 415 aaKnown RBP3.45□□□□□ -1.86
HMGN4-202ENST00000477243 ZSCAN1Q8NBB4 408 aa3.45□□□□□ -1.86
HMGN4-202ENST00000477243 NAXEQ8NCW5 288 aa3.45□□□□□ -1.86
HMGN4-202ENST00000477243 IL17REQ8NFR9 667 aa3.45□□□□□ -1.86
HMGN4-202ENST00000477243 CCT6BQ92526 530 aa3.45□□□□□ -1.86
HMGN4-202ENST00000477243 JARID2Q92833 1246 aaPredicted RBP3.45□□□□□ -1.86
HMGN4-202ENST00000477243 CNKSR1Q969H4 720 aa3.45□□□□□ -1.86
HMGN4-202ENST00000477243 AIFM3Q96NN9 605 aa3.45□□□□□ -1.86
HMGN4-202ENST00000477243 CLUHP3Q96NS8 147 aa3.45□□□□□ -1.86
HMGN4-202ENST00000477243 NUP88Q99567 741 aaPredicted RBP3.45□□□□□ -1.86
HMGN4-202ENST00000477243 PHAXQ9H814 394 aaKnown RBP3.45□□□□□ -1.86
HMGN4-202ENST00000477243 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.45□□□□□ -1.86
HMGN4-202ENST00000477243 C11orf16Q9NQ32 467 aa3.45□□□□□ -1.86
HMGN4-202ENST00000477243 CWC25Q9NXE8 425 aaPredicted RBP3.45□□□□□ -1.86
HMGN4-202ENST00000477243 ABI2Q9NYB9 513 aaPredicted RBP3.45□□□□□ -1.86
HMGN4-202ENST00000477243 TMEM63CQ9P1W3 806 aa3.45□□□□□ -1.86
HMGN4-202ENST00000477243 RTCBQ9Y3I0 505 aaKnown RBP3.45□□□□□ -1.86
HMGN4-202ENST00000477243 GPC6Q9Y625 555 aaPredicted RBP3.45□□□□□ -1.86
HMGN4-202ENST00000477243 WDR7Q9Y4E6 1490 aa3.45□□□□□ -1.86
HMGN4-202ENST00000477243 DNMBPQ6XZF7 1577 aa3.45□□□□□ -1.86
HMGN4-202ENST00000477243 CLSPNQ9HAW4 1339 aa3.44□□□□□ -1.86
HMGN4-202ENST00000477243 PTPRGP23470 1445 aa3.44□□□□□ -1.86
HMGN4-202ENST00000477243 MST1RQ04912 1400 aa3.44□□□□□ -1.86
HMGN4-202ENST00000477243 LRP6O75581 1613 aa3.44□□□□□ -1.86
HMGN4-202ENST00000477243 DIP2AQ14689 1571 aa3.44□□□□□ -1.86
HMGN4-202ENST00000477243 A0A1W2PP55 124 aa3.44□□□□□ -1.86
HMGN4-202ENST00000477243 FAM221AA4D161 298 aa3.44□□□□□ -1.86
HMGN4-202ENST00000477243 F5H423 210 aaPredicted RBP3.44□□□□□ -1.86
HMGN4-202ENST00000477243 GOLIM4O00461 696 aa3.44□□□□□ -1.86
HMGN4-202ENST00000477243 EREGO14944 169 aa3.44□□□□□ -1.86
HMGN4-202ENST00000477243 CILPO75339 1184 aa3.44□□□□□ -1.86
HMGN4-202ENST00000477243 ATE1O95260 518 aa3.44□□□□□ -1.86
HMGN4-202ENST00000477243 ASLP04424 464 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms