RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 GINM1Q9NU53 330 aa13.78□□□□□ -0.2
LSM2-212ENST00000477182 FOCADQ5VW36 1801 aa13.78□□□□□ -0.2
LSM2-212ENST00000477182 M0R2C6 588 aa13.77□□□□□ -0.21
LSM2-212ENST00000477182 CYBAP13498 195 aa13.77□□□□□ -0.21
LSM2-212ENST00000477182 CYP2C19P33261 490 aa13.77□□□□□ -0.21
LSM2-212ENST00000477182 ADCYAP1R1P41586 468 aa13.77□□□□□ -0.21
LSM2-212ENST00000477182 RHBDL3P58872 404 aa13.77□□□□□ -0.21
LSM2-212ENST00000477182 TLE2Q04725 743 aa13.77□□□□□ -0.21
LSM2-212ENST00000477182 RRP1BQ14684 758 aaKnown RBP13.77□□□□□ -0.21
LSM2-212ENST00000477182 AAK1Q2M2I8 961 aa13.77□□□□□ -0.21
LSM2-212ENST00000477182 C8orf34Q49A92 452 aa13.77□□□□□ -0.21
LSM2-212ENST00000477182 CCDC129Q6ZRS4 1044 aa13.77□□□□□ -0.21
LSM2-212ENST00000477182 RUFY2Q8WXA3 655 aa13.77□□□□□ -0.21
LSM2-212ENST00000477182 ESYT1Q9BSJ8 1104 aa13.77□□□□□ -0.21
LSM2-212ENST00000477182 PUS7LQ9H0K6 701 aaKnown RBP13.77□□□□□ -0.21
LSM2-212ENST00000477182 IL25Q9H293 177 aa13.77□□□□□ -0.21
LSM2-212ENST00000477182 HELLSQ9NRZ9 838 aa13.77□□□□□ -0.21
LSM2-212ENST00000477182 BAZ2AQ9UIF9 1905 aaKnown RBP13.77□□□□□ -0.21
LSM2-212ENST00000477182 MAGEB6P1A0A0J9YX57 407 aa13.76□□□□□ -0.21
LSM2-212ENST00000477182 KIAA0355O15063 1070 aa13.76□□□□□ -0.21
LSM2-212ENST00000477182 SEPT4O43236 478 aa13.76□□□□□ -0.21
LSM2-212ENST00000477182 MBD4O95243 580 aa13.76□□□□□ -0.21
LSM2-212ENST00000477182 MYCNP04198 464 aaPredicted RBP13.76□□□□□ -0.21
LSM2-212ENST00000477182 EPHB4P54760 987 aa13.76□□□□□ -0.21
LSM2-212ENST00000477182 GRB14Q14449 540 aa13.76□□□□□ -0.21
LSM2-212ENST00000477182 MCMDC2Q4G0Z9 681 aa13.76□□□□□ -0.21
LSM2-212ENST00000477182 TMED8Q6PL24 325 aaPredicted RBP13.76□□□□□ -0.21
LSM2-212ENST00000477182 TRPV1Q8NER1 839 aa13.76□□□□□ -0.21
LSM2-212ENST00000477182 LRFN3Q9BTN0 628 aa13.76□□□□□ -0.21
LSM2-212ENST00000477182 PRDM12Q9H4Q4 367 aa13.76□□□□□ -0.21
LSM2-212ENST00000477182 PI4KBQ9UBF8 816 aa13.76□□□□□ -0.21
LSM2-212ENST00000477182 TCF20Q9UGU0 1960 aaKnown RBP13.76□□□□□ -0.21
LSM2-212ENST00000477182 RAD50Q92878 1312 aa13.75□□□□□ -0.21
LSM2-212ENST00000477182 MYH1P12882 1939 aa13.75□□□□□ -0.21
LSM2-212ENST00000477182 SGSM2O43147 1006 aa13.75□□□□□ -0.21
LSM2-212ENST00000477182 ITGB8P26012 769 aa13.75□□□□□ -0.21
LSM2-212ENST00000477182 DYNLL1P63167 89 aaKnown RBP13.75□□□□□ -0.21
LSM2-212ENST00000477182 OLFML2BQ68BL8 750 aa13.75□□□□□ -0.21
LSM2-212ENST00000477182 CCDC174Q6PII3 467 aa13.75□□□□□ -0.21
LSM2-212ENST00000477182 USP17L2Q6R6M4 530 aa13.75□□□□□ -0.21
LSM2-212ENST00000477182 ZNF589Q86UQ0 364 aaPredicted RBP13.75□□□□□ -0.21
LSM2-212ENST00000477182 NPLOC4Q8TAT6 608 aa13.75□□□□□ -0.21
LSM2-212ENST00000477182 FERMT2Q96AC1 680 aa13.75□□□□□ -0.21
LSM2-212ENST00000477182 NOL10Q9BSC4 688 aaKnown RBP13.75□□□□□ -0.21
LSM2-212ENST00000477182 DHX36Q9H2U1 1008 aaKnown RBP13.75□□□□□ -0.21
LSM2-212ENST00000477182 ARMT1Q9H993 441 aa13.75□□□□□ -0.21
LSM2-212ENST00000477182 AATFQ9NY61 560 aaKnown RBP eCLIP13.75□□□□□ -0.21
LSM2-212ENST00000477182 CXXC1Q9P0U4 656 aaPredicted RBP13.75□□□□□ -0.21
LSM2-212ENST00000477182 NAV1Q8NEY1 1877 aa13.75□□□□□ -0.21
LSM2-212ENST00000477182 PLXNA1Q9UIW2 1896 aa13.74□□□□□ -0.21
LSM2-212ENST00000477182 CCDC171Q6TFL3 1326 aa13.74□□□□□ -0.21
LSM2-212ENST00000477182 USP17L15C9J2P7 530 aa13.74□□□□□ -0.21
LSM2-212ENST00000477182 USP17L13C9JLJ4 530 aa13.74□□□□□ -0.21
LSM2-212ENST00000477182 USP17L11C9JVI0 530 aa13.74□□□□□ -0.21
LSM2-212ENST00000477182 USP17L18D6R9N7 530 aa13.74□□□□□ -0.21
LSM2-212ENST00000477182 USP17L22D6RA61 530 aa13.74□□□□□ -0.21
LSM2-212ENST00000477182 USP17L17D6RBQ6 530 aa13.74□□□□□ -0.21
LSM2-212ENST00000477182 USP17L19D6RCP7 530 aa13.74□□□□□ -0.21
LSM2-212ENST00000477182 USP17L20D6RJB6 530 aa13.74□□□□□ -0.21
LSM2-212ENST00000477182 GPAA1O43292 621 aa13.74□□□□□ -0.21
LSM2-212ENST00000477182 IGHA2P01877 340 aa13.74□□□□□ -0.21
LSM2-212ENST00000477182 IGFBP4P22692 258 aa13.74□□□□□ -0.21
LSM2-212ENST00000477182 USP17L24Q0WX57 530 aa13.74□□□□□ -0.21
LSM2-212ENST00000477182 LRRC41Q15345 812 aa13.74□□□□□ -0.21
LSM2-212ENST00000477182 CCDC85BQ15834 202 aaPredicted RBP13.74□□□□□ -0.21
LSM2-212ENST00000477182 TMEM31Q5JXX7 168 aa13.74□□□□□ -0.21
LSM2-212ENST00000477182 DPP9Q86TI2 863 aa13.74□□□□□ -0.21
LSM2-212ENST00000477182 LCORLQ8N3X6 602 aa13.74□□□□□ -0.21
LSM2-212ENST00000477182 RIOK1Q9BRS2 568 aaKnown RBP13.74□□□□□ -0.21
LSM2-212ENST00000477182 CNMDO75829 334 aa13.73□□□□□ -0.21
LSM2-212ENST00000477182 BAG3O95817 575 aa13.73□□□□□ -0.21
LSM2-212ENST00000477182 BMP1P13497 986 aa13.73□□□□□ -0.21
LSM2-212ENST00000477182 PPP4CP60510 307 aa13.73□□□□□ -0.21
LSM2-212ENST00000477182 ANO1Q5XXA6 986 aa13.73□□□□□ -0.21
LSM2-212ENST00000477182 SH3RF3Q8TEJ3 882 aaPredicted RBP13.73□□□□□ -0.21
LSM2-212ENST00000477182 STRBPQ96SI9 672 aaKnown RBP13.73□□□□□ -0.21
LSM2-212ENST00000477182 TRIM34Q9BYJ4 488 aa13.73□□□□□ -0.21
LSM2-212ENST00000477182 PBX4Q9BYU1 374 aa13.73□□□□□ -0.21
LSM2-212ENST00000477182 EMILIN3Q9NT22 766 aa13.73□□□□□ -0.21
LSM2-212ENST00000477182 TMEM39AQ9NV64 488 aa13.73□□□□□ -0.21
LSM2-212ENST00000477182 SLC5A4Q9NY91 659 aa13.73□□□□□ -0.21
LSM2-212ENST00000477182 PHF24Q9UPV7 400 aa13.73□□□□□ -0.21
LSM2-212ENST00000477182 STRNO43815 780 aa13.72□□□□□ -0.21
LSM2-212ENST00000477182 SEC24BO95487 1268 aa13.72□□□□□ -0.21
LSM2-212ENST00000477182 MFAP1P55081 439 aaKnown RBP13.72□□□□□ -0.21
LSM2-212ENST00000477182 LBX2Q6XYB7 198 aa13.72□□□□□ -0.21
LSM2-212ENST00000477182 FOXP4Q8IVH2 680 aaPredicted RBP13.72□□□□□ -0.21
LSM2-212ENST00000477182 C12orf42Q96LP6 360 aa13.72□□□□□ -0.21
LSM2-212ENST00000477182 NECAB3Q96P71 396 aaPredicted RBP13.72□□□□□ -0.21
LSM2-212ENST00000477182 MSRAQ9UJ68 235 aa13.72□□□□□ -0.21
LSM2-212ENST00000477182 LAMA4Q16363 1823 aa13.71□□□□□ -0.21
LSM2-212ENST00000477182 ZNF236Q9UL36 1845 aa13.71□□□□□ -0.21
LSM2-212ENST00000477182 PRKAB2O43741 272 aa13.71□□□□□ -0.21
LSM2-212ENST00000477182 PQBP1O60828 265 aaKnown RBP13.71□□□□□ -0.21
LSM2-212ENST00000477182 PLCG2P16885 1265 aa13.71□□□□□ -0.21
LSM2-212ENST00000477182 PPIGQ13427 754 aaKnown RBP eCLIP13.71□□□□□ -0.21
LSM2-212ENST00000477182 ADGRE1Q14246 886 aa13.71□□□□□ -0.21
LSM2-212ENST00000477182 RAB30Q15771 203 aa13.71□□□□□ -0.21
LSM2-212ENST00000477182 VPS53Q5VIR6 699 aa13.71□□□□□ -0.21
LSM2-212ENST00000477182 KIAA1211Q6ZU35 1233 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 185.4 ms