RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 SEC62Q99442 399 aaKnown RBP13.99□□□□□ -0.17
VARS2-208ENST00000477052 UBE2OQ9C0C9 1292 aaKnown RBP13.99□□□□□ -0.17
VARS2-208ENST00000477052 SH2D4AQ9H788 454 aa13.99□□□□□ -0.17
VARS2-208ENST00000477052 KANSL2Q9H9L4 492 aa13.99□□□□□ -0.17
VARS2-208ENST00000477052 PCDHB15Q9Y5E8 787 aa13.99□□□□□ -0.17
VARS2-208ENST00000477052 DNAH12Q6ZR08 3092 aa13.99□□□□□ -0.17
VARS2-208ENST00000477052 PARP14Q460N5 1801 aa13.99□□□□□ -0.17
VARS2-208ENST00000477052 A0A1W2PPC1 479 aa13.98□□□□□ -0.17
VARS2-208ENST00000477052 WDR46O15213 610 aaKnown RBP13.98□□□□□ -0.17
VARS2-208ENST00000477052 RNF113AO15541 343 aaKnown RBP13.98□□□□□ -0.17
VARS2-208ENST00000477052 STRNO43815 780 aa13.98□□□□□ -0.17
VARS2-208ENST00000477052 BMP8BP34820 402 aa13.98□□□□□ -0.17
VARS2-208ENST00000477052 SLC4A3P48751 1232 aa13.98□□□□□ -0.17
VARS2-208ENST00000477052 MB21D1Q8N884 522 aa13.98□□□□□ -0.17
VARS2-208ENST00000477052 SHCBP1Q8NEM2 672 aa13.98□□□□□ -0.17
VARS2-208ENST00000477052 MAML3Q96JK9 1138 aa13.98□□□□□ -0.17
VARS2-208ENST00000477052 MROH8Q9H579 483 aa13.98□□□□□ -0.17
VARS2-208ENST00000477052 MKNK2Q9HBH9 465 aa13.98□□□□□ -0.17
VARS2-208ENST00000477052 ARPP21Q9UBL0 812 aaPredicted RBP13.98□□□□□ -0.17
VARS2-208ENST00000477052 VWA5AO00534 786 aa13.97□□□□□ -0.17
VARS2-208ENST00000477052 GPAA1O43292 621 aa13.97□□□□□ -0.17
VARS2-208ENST00000477052 APPP05067 770 aa13.97□□□□□ -0.17
VARS2-208ENST00000477052 FCER1AP12319 257 aa13.97□□□□□ -0.17
VARS2-208ENST00000477052 TAL1P17542 331 aaPredicted RBP13.97□□□□□ -0.17
VARS2-208ENST00000477052 OLFML2BQ68BL8 750 aa13.97□□□□□ -0.17
VARS2-208ENST00000477052 APPBP2Q92624 585 aa13.97□□□□□ -0.17
VARS2-208ENST00000477052 FERMT2Q96AC1 680 aa13.97□□□□□ -0.17
VARS2-208ENST00000477052 MMP19Q99542 508 aa13.97□□□□□ -0.17
VARS2-208ENST00000477052 GOPCQ9HD26 462 aa13.97□□□□□ -0.17
VARS2-208ENST00000477052 CLIP2Q9UDT6 1046 aa13.97□□□□□ -0.17
VARS2-208ENST00000477052 ZNF236Q9UL36 1845 aa13.97□□□□□ -0.17
VARS2-208ENST00000477052 TDO2P48775 406 aa13.96□□□□□ -0.17
VARS2-208ENST00000477052 RTP1P59025 263 aa13.96□□□□□ -0.17
VARS2-208ENST00000477052 SBK1Q52WX2 424 aa13.96□□□□□ -0.17
VARS2-208ENST00000477052 FAM47AQ5JRC9 791 aa13.96□□□□□ -0.17
VARS2-208ENST00000477052 TDHQ8IZJ6 230 aa13.96□□□□□ -0.17
VARS2-208ENST00000477052 REPS2Q8NFH8 660 aa13.96□□□□□ -0.17
VARS2-208ENST00000477052 LENG1Q96BZ8 264 aaPredicted RBP13.96□□□□□ -0.17
VARS2-208ENST00000477052 GPATCH3Q96I76 525 aa13.96□□□□□ -0.17
VARS2-208ENST00000477052 PPP1R9AQ9ULJ8 1098 aa13.96□□□□□ -0.17
VARS2-208ENST00000477052 ADAMTS5Q9UNA0 930 aa13.96□□□□□ -0.17
VARS2-208ENST00000477052 ATP11BQ9Y2G3 1177 aa13.96□□□□□ -0.17
VARS2-208ENST00000477052 ZNFX1Q9P2E3 1918 aaKnown RBP13.96□□□□□ -0.18
VARS2-208ENST00000477052 F5H6K3 240 aa13.95□□□□□ -0.18
VARS2-208ENST00000477052 DNM1LO00429 736 aa13.95□□□□□ -0.18
VARS2-208ENST00000477052 SEPT4O43236 478 aa13.95□□□□□ -0.18
VARS2-208ENST00000477052 MSCO60682 206 aa13.95□□□□□ -0.18
VARS2-208ENST00000477052 NDUFB10O96000 172 aa13.95□□□□□ -0.18
VARS2-208ENST00000477052 STAT3P40763 770 aa13.95□□□□□ -0.18
VARS2-208ENST00000477052 ADCYAP1R1P41586 468 aa13.95□□□□□ -0.18
VARS2-208ENST00000477052 KLRC3Q07444 240 aa13.95□□□□□ -0.18
VARS2-208ENST00000477052 RIOX2Q8IUF8 465 aa13.95□□□□□ -0.18
VARS2-208ENST00000477052 LRRC47Q8N1G4 583 aaKnown RBP13.95□□□□□ -0.18
VARS2-208ENST00000477052 PI4K2BQ8TCG2 481 aa13.95□□□□□ -0.18
VARS2-208ENST00000477052 ZNF214Q9UL59 606 aaPredicted RBP13.95□□□□□ -0.18
VARS2-208ENST00000477052 RIPK3Q9Y572 518 aa13.95□□□□□ -0.18
VARS2-208ENST00000477052 GREB1LQ9C091 1923 aaPredicted RBP13.94□□□□□ -0.18
VARS2-208ENST00000477052 SLC25A27O95847 323 aa13.94□□□□□ -0.18
VARS2-208ENST00000477052 LRRC41Q15345 812 aa13.94□□□□□ -0.18
VARS2-208ENST00000477052 CCDC129Q6ZRS4 1044 aa13.94□□□□□ -0.18
VARS2-208ENST00000477052 IFNL3Q8IZI9 196 aa13.94□□□□□ -0.18
VARS2-208ENST00000477052 ABRAQ8N0Z2 381 aa13.94□□□□□ -0.18
VARS2-208ENST00000477052 CPXCR1Q8N123 301 aa13.94□□□□□ -0.18
VARS2-208ENST00000477052 DEFB123Q8N688 67 aa13.94□□□□□ -0.18
VARS2-208ENST00000477052 CEP95Q96GE4 821 aa13.94□□□□□ -0.18
VARS2-208ENST00000477052 SLF1Q9BQI6 1058 aa13.94□□□□□ -0.18
VARS2-208ENST00000477052 INCENPQ9NQS7 918 aa13.94□□□□□ -0.18
VARS2-208ENST00000477052 SLC5A4Q9NY91 659 aa13.94□□□□□ -0.18
VARS2-208ENST00000477052 SMCHD1A6NHR9 2005 aa13.93□□□□□ -0.18
VARS2-208ENST00000477052 IGKV6D-41A0A0C4DH26 115 aa13.93□□□□□ -0.18
VARS2-208ENST00000477052 KBTBD13C9JR72 458 aa13.93□□□□□ -0.18
VARS2-208ENST00000477052 PGK1P00558 417 aa13.93□□□□□ -0.18
VARS2-208ENST00000477052 KCTD2Q14681 263 aa13.93□□□□□ -0.18
VARS2-208ENST00000477052 ZNF792Q3KQV3 632 aa13.93□□□□□ -0.18
VARS2-208ENST00000477052 TRIM60Q495X7 471 aa13.93□□□□□ -0.18
VARS2-208ENST00000477052 SNRNP48Q6IEG0 339 aaKnown RBP13.93□□□□□ -0.18
VARS2-208ENST00000477052 SLC39A5Q6ZMH5 540 aa13.93□□□□□ -0.18
VARS2-208ENST00000477052 ARRDC4Q8NCT1 418 aa13.93□□□□□ -0.18
VARS2-208ENST00000477052 KIFC2Q96AC6 838 aa13.93□□□□□ -0.18
VARS2-208ENST00000477052 FSD1Q9BTV5 496 aa13.93□□□□□ -0.18
VARS2-208ENST00000477052 RAVER2Q9HCJ3 691 aaKnown RBP13.93□□□□□ -0.18
VARS2-208ENST00000477052 PRDM5Q9NQX1 630 aaPredicted RBP13.93□□□□□ -0.18
VARS2-208ENST00000477052 NYAP2Q9P242 653 aa13.93□□□□□ -0.18
VARS2-208ENST00000477052 ROBO3Q96MS0 1386 aa13.93□□□□□ -0.18
VARS2-208ENST00000477052 PATL2C9JE40 543 aaKnown RBP13.92□□□□□ -0.18
VARS2-208ENST00000477052 ZFYP08048 801 aaPredicted RBP13.92□□□□□ -0.18
VARS2-208ENST00000477052 IRX5P78411 483 aaPredicted RBP13.92□□□□□ -0.18
VARS2-208ENST00000477052 LRIT3Q3SXY7 679 aa13.92□□□□□ -0.18
VARS2-208ENST00000477052 GIMAP6Q6P9H5 292 aa13.92□□□□□ -0.18
VARS2-208ENST00000477052 SH3RF1Q7Z6J0 888 aa13.92□□□□□ -0.18
VARS2-208ENST00000477052 ZNF444Q8N0Y2 327 aaPredicted RBP13.92□□□□□ -0.18
VARS2-208ENST00000477052 LBHD1Q9BQE6 289 aaPredicted RBP13.92□□□□□ -0.18
VARS2-208ENST00000477052 TINF2Q9BSI4 451 aa13.92□□□□□ -0.18
VARS2-208ENST00000477052 XPNPEP3Q9NQH7 507 aa13.92□□□□□ -0.18
VARS2-208ENST00000477052 ISY1Q9ULR0 285 aaKnown RBP13.92□□□□□ -0.18
VARS2-208ENST00000477052 PLXNA1Q9UIW2 1896 aa13.92□□□□□ -0.18
VARS2-208ENST00000477052 COL6A3P12111 3177 aa13.91□□□□□ -0.18
VARS2-208ENST00000477052 SNAP25P60880 206 aa13.91□□□□□ -0.18
VARS2-208ENST00000477052 CTDSPL2Q05D32 466 aa13.91□□□□□ -0.18
VARS2-208ENST00000477052 ZMYM1Q5SVZ6 1142 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms