RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 PRLRP16471 622 aa15.43■□□□□ 0.06
HDAC1-206ENST00000476391 CHST3Q7LGC8 479 aa15.43■□□□□ 0.06
HDAC1-206ENST00000476391 CREG2Q8IUH2 290 aa15.43■□□□□ 0.06
HDAC1-206ENST00000476391 STAMBPL1Q96FJ0 436 aa15.43■□□□□ 0.06
HDAC1-206ENST00000476391 CHP1Q99653 195 aa15.43■□□□□ 0.06
HDAC1-206ENST00000476391 JADE2Q9NQC1 790 aa15.43■□□□□ 0.06
HDAC1-206ENST00000476391 IDEP14735 1019 aa15.42■□□□□ 0.06
HDAC1-206ENST00000476391 HERVK_113P62684 666 aa15.42■□□□□ 0.06
HDAC1-206ENST00000476391 MFN1Q8IWA4 741 aa15.42■□□□□ 0.06
HDAC1-206ENST00000476391 CACNA2D3Q8IZS8 1091 aa15.42■□□□□ 0.06
HDAC1-206ENST00000476391 TBC1D31Q96DN5 1066 aa15.42■□□□□ 0.06
HDAC1-206ENST00000476391 CHPF2Q9P2E5 772 aa15.42■□□□□ 0.06
HDAC1-206ENST00000476391 LIMA1Q9UHB6 759 aaKnown RBP15.42■□□□□ 0.06
HDAC1-206ENST00000476391 BAIAP2L1Q9UHR4 511 aa15.42■□□□□ 0.06
HDAC1-206ENST00000476391 SERTAD1Q9UHV2 236 aa15.42■□□□□ 0.06
HDAC1-206ENST00000476391 HPS5Q9UPZ3 1129 aa15.42■□□□□ 0.06
HDAC1-206ENST00000476391 IGSF1Q8N6C5 1336 aa15.42■□□□□ 0.06
HDAC1-206ENST00000476391 RNF225M0QZC1 329 aaPredicted RBP15.42■□□□□ 0.06
HDAC1-206ENST00000476391 POLR2DO15514 142 aaKnown RBP15.42■□□□□ 0.06
HDAC1-206ENST00000476391 ANP32DO95626 131 aa15.42■□□□□ 0.06
HDAC1-206ENST00000476391 EZH2Q15910 746 aaKnown RBP15.42■□□□□ 0.06
HDAC1-206ENST00000476391 SLC30A9Q6PML9 568 aa15.42■□□□□ 0.06
HDAC1-206ENST00000476391 SPATA4Q8NEY3 305 aa15.42■□□□□ 0.06
HDAC1-206ENST00000476391 SEC16BQ96JE7 1060 aa15.42■□□□□ 0.06
HDAC1-206ENST00000476391 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.42■□□□□ 0.06
HDAC1-206ENST00000476391 GOLGA8BA8MQT2 603 aa15.41■□□□□ 0.06
HDAC1-206ENST00000476391 N4BP3O15049 544 aa15.41■□□□□ 0.06
HDAC1-206ENST00000476391 TRAPPC3O43617 180 aa15.41■□□□□ 0.06
HDAC1-206ENST00000476391 EIF2S2P20042 333 aaKnown RBP15.41■□□□□ 0.06
HDAC1-206ENST00000476391 SPAG1Q07617 926 aa15.41■□□□□ 0.06
HDAC1-206ENST00000476391 TBC1D25Q3MII6 688 aa15.41■□□□□ 0.06
HDAC1-206ENST00000476391 IL17REQ8NFR9 667 aa15.41■□□□□ 0.06
HDAC1-206ENST00000476391 CCT6BQ92526 530 aa15.41■□□□□ 0.06
HDAC1-206ENST00000476391 CCDC43Q96MW1 224 aaKnown RBP15.41■□□□□ 0.06
HDAC1-206ENST00000476391 PPANQ9NQ55 473 aaKnown RBP15.41■□□□□ 0.06
HDAC1-206ENST00000476391 SNX12Q9UMY4 172 aa15.41■□□□□ 0.06
HDAC1-206ENST00000476391 LEMD3Q9Y2U8 911 aa15.41■□□□□ 0.06
HDAC1-206ENST00000476391 USP31Q70CQ4 1352 aa15.41■□□□□ 0.06
HDAC1-206ENST00000476391 UTYO14607 1347 aa15.41■□□□□ 0.06
HDAC1-206ENST00000476391 KLF18A0A0U1RQI7 1052 aa15.41■□□□□ 0.06
HDAC1-206ENST00000476391 SNX1Q13596 522 aa15.41■□□□□ 0.06
HDAC1-206ENST00000476391 THEMIS2Q5TEJ8 643 aa15.41■□□□□ 0.06
HDAC1-206ENST00000476391 RPUSD2Q8IZ73 545 aaKnown RBP15.41■□□□□ 0.06
HDAC1-206ENST00000476391 KBTBD3Q8NAB2 608 aa15.41■□□□□ 0.06
HDAC1-206ENST00000476391 HVCN1Q96D96 273 aa15.41■□□□□ 0.06
HDAC1-206ENST00000476391 PURBQ96QR8 312 aaKnown RBP15.41■□□□□ 0.06
HDAC1-206ENST00000476391 PSMD1Q99460 953 aa15.41■□□□□ 0.06
HDAC1-206ENST00000476391 HAUS7Q99871 368 aa15.41■□□□□ 0.06
HDAC1-206ENST00000476391 C4AP0C0L4 1744 aa15.4■□□□□ 0.06
HDAC1-206ENST00000476391 C4BP0C0L5 1744 aa15.4■□□□□ 0.06
HDAC1-206ENST00000476391 MLH3Q9UHC1 1453 aa15.4■□□□□ 0.06
HDAC1-206ENST00000476391 PPIP5K2O43314 1243 aa15.4■□□□□ 0.06
HDAC1-206ENST00000476391 WASHC4Q2M389 1173 aa15.4■□□□□ 0.06
HDAC1-206ENST00000476391 KRT40Q6A162 431 aa15.4■□□□□ 0.06
HDAC1-206ENST00000476391 ZNF579Q8NAF0 562 aaKnown RBP15.4■□□□□ 0.06
HDAC1-206ENST00000476391 KLHL23Q8NBE8 558 aa15.4■□□□□ 0.06
HDAC1-206ENST00000476391 NOP53Q9NZM5 478 aaKnown RBP15.4■□□□□ 0.06
HDAC1-206ENST00000476391 IQSEC3Q9UPP2 1182 aaPredicted RBP15.4■□□□□ 0.06
HDAC1-206ENST00000476391 PALLDQ8WX93 1383 aa15.4■□□□□ 0.06
HDAC1-206ENST00000476391 PSMD2Q13200 908 aa15.39■□□□□ 0.05
HDAC1-206ENST00000476391 BLMHQ13867 455 aa15.39■□□□□ 0.05
HDAC1-206ENST00000476391 KRT31Q15323 416 aa15.39■□□□□ 0.05
HDAC1-206ENST00000476391 CCDC181Q5TID7 509 aa15.39■□□□□ 0.05
HDAC1-206ENST00000476391 HAUS3Q68CZ6 603 aa15.39■□□□□ 0.05
HDAC1-206ENST00000476391 HIBCHQ6NVY1 386 aaPredicted RBP15.39■□□□□ 0.05
HDAC1-206ENST00000476391 IFT20Q8IY31 132 aa15.39■□□□□ 0.05
HDAC1-206ENST00000476391 ALG1Q9BT22 464 aa15.39■□□□□ 0.05
HDAC1-206ENST00000476391 DBNLQ9UJU6 430 aaKnown RBP15.39■□□□□ 0.05
HDAC1-206ENST00000476391 RPS6KL1Q9Y6S9 549 aa15.39■□□□□ 0.05
HDAC1-206ENST00000476391 MST1RQ04912 1400 aa15.39■□□□□ 0.05
HDAC1-206ENST00000476391 SH2B2O14492 632 aaPredicted RBP15.39■□□□□ 0.05
HDAC1-206ENST00000476391 ACTN4O43707 911 aaKnown RBP15.39■□□□□ 0.05
HDAC1-206ENST00000476391 CHGBP05060 677 aa15.39■□□□□ 0.05
HDAC1-206ENST00000476391 GSTA1P08263 222 aa15.39■□□□□ 0.05
HDAC1-206ENST00000476391 HSPD1P10809 573 aaKnown RBP15.39■□□□□ 0.05
HDAC1-206ENST00000476391 FERP16591 822 aa15.39■□□□□ 0.05
HDAC1-206ENST00000476391 PTPREP23469 700 aa15.39■□□□□ 0.05
HDAC1-206ENST00000476391 CDC25AP30304 524 aa15.39■□□□□ 0.05
HDAC1-206ENST00000476391 STX17P56962 302 aa15.39■□□□□ 0.05
HDAC1-206ENST00000476391 CWF19L1Q69YN2 538 aaKnown RBP15.39■□□□□ 0.05
HDAC1-206ENST00000476391 KAZALD1Q96I82 304 aa15.39■□□□□ 0.05
HDAC1-206ENST00000476391 DNAJC7Q99615 494 aa15.39■□□□□ 0.05
HDAC1-206ENST00000476391 HINFPQ9BQA5 517 aa15.39■□□□□ 0.05
HDAC1-206ENST00000476391 PCDHGC5Q9Y5F6 944 aa15.39■□□□□ 0.05
HDAC1-206ENST00000476391 DDX60Q8IY21 1712 aaKnown RBP15.39■□□□□ 0.05
HDAC1-206ENST00000476391 MYO5AQ9Y4I1 1855 aaKnown RBP15.39■□□□□ 0.05
HDAC1-206ENST00000476391 GRM8O00222 908 aa15.38■□□□□ 0.05
HDAC1-206ENST00000476391 LUC7L3O95232 432 aaKnown RBP15.38■□□□□ 0.05
HDAC1-206ENST00000476391 CCT6AP40227 531 aaKnown RBP15.38■□□□□ 0.05
HDAC1-206ENST00000476391 PIP4K2AP48426 406 aaPredicted RBP15.38■□□□□ 0.05
HDAC1-206ENST00000476391 RBM5P52756 815 aaKnown RBP eCLIP15.38■□□□□ 0.05
HDAC1-206ENST00000476391 SLC7A5Q01650 507 aa15.38■□□□□ 0.05
HDAC1-206ENST00000476391 PPP1R7Q15435 360 aa15.38■□□□□ 0.05
HDAC1-206ENST00000476391 TSR1Q2NL82 804 aaKnown RBP15.38■□□□□ 0.05
HDAC1-206ENST00000476391 GKAP1Q5VSY0 366 aaPredicted RBP15.38■□□□□ 0.05
HDAC1-206ENST00000476391 KLHL10Q6JEL2 608 aa15.38■□□□□ 0.05
HDAC1-206ENST00000476391 SUCLG2Q96I99 432 aa15.38■□□□□ 0.05
HDAC1-206ENST00000476391 A6NHS1 94 aa15.38■□□□□ 0.05
HDAC1-206ENST00000476391 COQ9O75208 318 aa15.38■□□□□ 0.05
HDAC1-206ENST00000476391 CD44P16070 742 aaKnown RBP15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms