RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 EAF1Q96JC9 268 aaPredicted RBP6.87□□□□□ -1.31
ECHDC1-215ENST00000475319 HOMER3Q9NSC5 361 aa6.87□□□□□ -1.31
ECHDC1-215ENST00000475319 GINM1Q9NU53 330 aa6.87□□□□□ -1.31
ECHDC1-215ENST00000475319 ANKIB1Q9P2G1 1089 aa6.87□□□□□ -1.31
ECHDC1-215ENST00000475319 GPC6Q9Y625 555 aaPredicted RBP6.87□□□□□ -1.31
ECHDC1-215ENST00000475319 MAPK8IP3Q9UPT6 1336 aa6.87□□□□□ -1.31
ECHDC1-215ENST00000475319 A0A1B0GUA9 196 aa6.86□□□□□ -1.31
ECHDC1-215ENST00000475319 ZSCAN9O15535 394 aaPredicted RBP6.86□□□□□ -1.31
ECHDC1-215ENST00000475319 TIMM44O43615 452 aa6.86□□□□□ -1.31
ECHDC1-215ENST00000475319 DYRK3O43781 588 aa6.86□□□□□ -1.31
ECHDC1-215ENST00000475319 HYAL3O43820 417 aaPredicted RBP6.86□□□□□ -1.31
ECHDC1-215ENST00000475319 SH3BP5O60239 455 aa6.86□□□□□ -1.31
ECHDC1-215ENST00000475319 ERLIN1O75477 346 aa6.86□□□□□ -1.31
ECHDC1-215ENST00000475319 RPS6KA5O75582 802 aa6.86□□□□□ -1.31
ECHDC1-215ENST00000475319 TPPPO94811 219 aa6.86□□□□□ -1.31
ECHDC1-215ENST00000475319 AMPD1P23109 780 aa6.86□□□□□ -1.31
ECHDC1-215ENST00000475319 GBP2P32456 591 aaPredicted RBP6.86□□□□□ -1.31
ECHDC1-215ENST00000475319 GPC1P35052 558 aa6.86□□□□□ -1.31
ECHDC1-215ENST00000475319 EIF4A3P38919 411 aaKnown RBP6.86□□□□□ -1.31
ECHDC1-215ENST00000475319 MNAT1P51948 309 aa6.86□□□□□ -1.31
ECHDC1-215ENST00000475319 CORO7P57737 925 aa6.86□□□□□ -1.31
ECHDC1-215ENST00000475319 IGBP1P78318 339 aa6.86□□□□□ -1.31
ECHDC1-215ENST00000475319 DEUP1Q05D60 604 aa6.86□□□□□ -1.31
ECHDC1-215ENST00000475319 PRPF4BQ13523 1007 aaKnown RBP6.86□□□□□ -1.31
ECHDC1-215ENST00000475319 RELL1Q8IUW5 271 aa6.86□□□□□ -1.31
ECHDC1-215ENST00000475319 MYOCDQ8IZQ8 938 aa6.86□□□□□ -1.31
ECHDC1-215ENST00000475319 PHC3Q8NDX5 983 aa6.86□□□□□ -1.31
ECHDC1-215ENST00000475319 C3orf58Q8NDZ4 430 aa6.86□□□□□ -1.31
ECHDC1-215ENST00000475319 BICD1Q96G01 975 aa6.86□□□□□ -1.31
ECHDC1-215ENST00000475319 TBC1D32Q96NH3 1257 aa6.86□□□□□ -1.31
ECHDC1-215ENST00000475319 SRPK1Q96SB4 655 aaKnown RBP6.86□□□□□ -1.31
ECHDC1-215ENST00000475319 UTP14AQ9BVJ6 771 aaKnown RBP6.86□□□□□ -1.31
ECHDC1-215ENST00000475319 ZSCAN16Q9H4T2 348 aaPredicted RBP6.86□□□□□ -1.31
ECHDC1-215ENST00000475319 RETREG1Q9H6L5 497 aa6.86□□□□□ -1.31
ECHDC1-215ENST00000475319 USP25Q9UHP3 1055 aa6.86□□□□□ -1.31
ECHDC1-215ENST00000475319 GDF2Q9UK05 429 aaPredicted RBP6.86□□□□□ -1.31
ECHDC1-215ENST00000475319 RCAN3Q9UKA8 241 aa6.86□□□□□ -1.31
ECHDC1-215ENST00000475319 PNMA2Q9UL42 364 aa6.86□□□□□ -1.31
ECHDC1-215ENST00000475319 ATP10BO94823 1461 aa6.86□□□□□ -1.31
ECHDC1-215ENST00000475319 A0A087WUV0 522 aaPredicted RBP6.86□□□□□ -1.31
ECHDC1-215ENST00000475319 XYLBO75191 536 aa6.86□□□□□ -1.31
ECHDC1-215ENST00000475319 RLBP1P12271 317 aa6.86□□□□□ -1.31
ECHDC1-215ENST00000475319 ATP4AP20648 1035 aa6.86□□□□□ -1.31
ECHDC1-215ENST00000475319 NF2P35240 595 aa6.86□□□□□ -1.31
ECHDC1-215ENST00000475319 CDR1P51861 262 aa6.86□□□□□ -1.31
ECHDC1-215ENST00000475319 MRPL12P52815 198 aaKnown RBP6.86□□□□□ -1.31
ECHDC1-215ENST00000475319 PWP1Q13610 501 aa6.86□□□□□ -1.31
ECHDC1-215ENST00000475319 RAB3GAP1Q15042 981 aa6.86□□□□□ -1.31
ECHDC1-215ENST00000475319 TAF7Q15545 349 aaPredicted RBP6.86□□□□□ -1.31
ECHDC1-215ENST00000475319 NBPF8Q3BBV2 869 aa6.86□□□□□ -1.31
ECHDC1-215ENST00000475319 LRRC69Q6ZNQ3 347 aa6.86□□□□□ -1.31
ECHDC1-215ENST00000475319 CCDC80Q76M96 950 aa6.86□□□□□ -1.31
ECHDC1-215ENST00000475319 LYSMD3Q7Z3D4 306 aa6.86□□□□□ -1.31
ECHDC1-215ENST00000475319 CATIPQ7Z7H3 387 aa6.86□□□□□ -1.31
ECHDC1-215ENST00000475319 EXOC4Q96A65 974 aa6.86□□□□□ -1.31
ECHDC1-215ENST00000475319 DDX11Q96FC9 970 aa6.86□□□□□ -1.31
ECHDC1-215ENST00000475319 TMEM74Q96NL1 305 aa6.86□□□□□ -1.31
ECHDC1-215ENST00000475319 TRIM55Q9BYV6 548 aa6.86□□□□□ -1.31
ECHDC1-215ENST00000475319 PRKRIP1Q9H875 184 aaPredicted RBP6.86□□□□□ -1.31
ECHDC1-215ENST00000475319 LATS2Q9NRM7 1088 aa6.86□□□□□ -1.31
ECHDC1-215ENST00000475319 ABI2Q9NYB9 513 aaPredicted RBP6.86□□□□□ -1.31
ECHDC1-215ENST00000475319 LCMT1Q9UIC8 334 aa6.86□□□□□ -1.31
ECHDC1-215ENST00000475319 TPX2Q9ULW0 747 aaKnown RBP6.86□□□□□ -1.31
ECHDC1-215ENST00000475319 MIA2Q96PC5 1412 aa6.85□□□□□ -1.31
ECHDC1-215ENST00000475319 RRBP1Q9P2E9 1410 aaKnown RBP6.85□□□□□ -1.31
ECHDC1-215ENST00000475319 CFAP74Q9C0B2 1584 aa6.85□□□□□ -1.31
ECHDC1-215ENST00000475319 EIF3CLB5ME19 914 aaKnown RBP6.85□□□□□ -1.31
ECHDC1-215ENST00000475319 ENPP3O14638 875 aa6.85□□□□□ -1.31
ECHDC1-215ENST00000475319 FBXO24O75426 580 aa6.85□□□□□ -1.31
ECHDC1-215ENST00000475319 STIP1P31948 543 aaKnown RBP6.85□□□□□ -1.31
ECHDC1-215ENST00000475319 ACTN2P35609 894 aa6.85□□□□□ -1.31
ECHDC1-215ENST00000475319 DDIT3P35638 169 aa6.85□□□□□ -1.31
ECHDC1-215ENST00000475319 RNF144AP50876 292 aaPredicted RBP6.85□□□□□ -1.31
ECHDC1-215ENST00000475319 PRSS36Q5K4E3 855 aa6.85□□□□□ -1.31
ECHDC1-215ENST00000475319 RNF187Q5TA31 235 aaPredicted RBP6.85□□□□□ -1.31
ECHDC1-215ENST00000475319 RIPOR1Q6ZS17 1223 aa6.85□□□□□ -1.31
ECHDC1-215ENST00000475319 FILIP1Q7Z7B0 1213 aa6.85□□□□□ -1.31
ECHDC1-215ENST00000475319 ELOA2Q8IYF1 753 aaPredicted RBP6.85□□□□□ -1.31
ECHDC1-215ENST00000475319 ZNF296Q8WUU4 475 aaPredicted RBP6.85□□□□□ -1.31
ECHDC1-215ENST00000475319 HNRNPLLQ8WVV9 542 aaKnown RBP6.85□□□□□ -1.31
ECHDC1-215ENST00000475319 JARID2Q92833 1246 aaPredicted RBP6.85□□□□□ -1.31
ECHDC1-215ENST00000475319 GTPBP3Q969Y2 492 aaKnown RBP6.85□□□□□ -1.31
ECHDC1-215ENST00000475319 RNPC3Q96LT9 517 aaKnown RBP6.85□□□□□ -1.31
ECHDC1-215ENST00000475319 EIF3CQ99613 913 aaKnown RBP6.85□□□□□ -1.31
ECHDC1-215ENST00000475319 THUMPD2Q9BTF0 503 aaKnown RBP6.85□□□□□ -1.31
ECHDC1-215ENST00000475319 EHD4Q9H223 541 aa6.85□□□□□ -1.31
ECHDC1-215ENST00000475319 METTL14Q9HCE5 456 aaKnown RBP6.85□□□□□ -1.31
ECHDC1-215ENST00000475319 INCENPQ9NQS7 918 aa6.85□□□□□ -1.31
ECHDC1-215ENST00000475319 SIRPGQ9P1W8 387 aa6.85□□□□□ -1.31
ECHDC1-215ENST00000475319 CLIP2Q9UDT6 1046 aa6.85□□□□□ -1.31
ECHDC1-215ENST00000475319 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.85□□□□□ -1.31
ECHDC1-215ENST00000475319 ROCK1Q13464 1354 aa6.85□□□□□ -1.31
ECHDC1-215ENST00000475319 YEATS2Q9ULM3 1422 aa6.84□□□□□ -1.31
ECHDC1-215ENST00000475319 DENND4BO75064 1496 aaPredicted RBP6.84□□□□□ -1.31
ECHDC1-215ENST00000475319 F8VZ95 297 aa6.84□□□□□ -1.31
ECHDC1-215ENST00000475319 KLF4O43474 513 aa6.84□□□□□ -1.31
ECHDC1-215ENST00000475319 E2F6O75461 281 aa6.84□□□□□ -1.31
ECHDC1-215ENST00000475319 RAPGEF3O95398 923 aa6.84□□□□□ -1.31
ECHDC1-215ENST00000475319 HARSP12081 509 aaKnown RBP6.84□□□□□ -1.31
ECHDC1-215ENST00000475319 KCNA2P16389 499 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms