RNA–Protein interactions for RNA: ENST00000474345.5

FDPS-210, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 3

Gene FDPS, Length 713 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-210ENST00000474345 CAP1Q01518 475 aa17.81■□□□□ 0.44
FDPS-210ENST00000474345 C8orf34Q49A92 452 aa17.81■□□□□ 0.44
FDPS-210ENST00000474345 IGDCC4Q8TDY8 1250 aa17.81■□□□□ 0.44
FDPS-210ENST00000474345 GMCL1Q96IK5 515 aa17.81■□□□□ 0.44
FDPS-210ENST00000474345 TXNRD2Q9NNW7 524 aa17.81■□□□□ 0.44
FDPS-210ENST00000474345 FBXO28Q9NVF7 368 aa17.81■□□□□ 0.44
FDPS-210ENST00000474345 MTMR7Q9Y216 660 aa17.81■□□□□ 0.44
FDPS-210ENST00000474345 IFIT3O14879 490 aaKnown RBP17.8■□□□□ 0.44
FDPS-210ENST00000474345 FLOT1O75955 427 aa17.8■□□□□ 0.44
FDPS-210ENST00000474345 MCM5P33992 734 aa17.8■□□□□ 0.44
FDPS-210ENST00000474345 SLC1A4P43007 532 aa17.8■□□□□ 0.44
FDPS-210ENST00000474345 EXOSC10Q01780 885 aaKnown RBP17.8■□□□□ 0.44
FDPS-210ENST00000474345 KRT32Q14532 448 aa17.8■□□□□ 0.44
FDPS-210ENST00000474345 LBX2Q6XYB7 198 aa17.8■□□□□ 0.44
FDPS-210ENST00000474345 RASGRP2Q7LDG7 609 aa17.8■□□□□ 0.44
FDPS-210ENST00000474345 SENP2Q9HC62 589 aa17.8■□□□□ 0.44
FDPS-210ENST00000474345 MORF4L1Q9UBU8 362 aa17.8■□□□□ 0.44
FDPS-210ENST00000474345 ADAMTS5Q9UNA0 930 aa17.8■□□□□ 0.44
FDPS-210ENST00000474345 PARP14Q460N5 1801 aa17.79■□□□□ 0.44
FDPS-210ENST00000474345 PRC1O43663 620 aa17.79■□□□□ 0.44
FDPS-210ENST00000474345 CNMDO75829 334 aa17.79■□□□□ 0.44
FDPS-210ENST00000474345 CTGFP29279 349 aa17.79■□□□□ 0.44
FDPS-210ENST00000474345 FAM110CQ1W6H9 321 aa17.79■□□□□ 0.44
FDPS-210ENST00000474345 IFIT1BQ5T764 474 aaKnown RBP17.79■□□□□ 0.44
FDPS-210ENST00000474345 KCTD1Q719H9 257 aa17.79■□□□□ 0.44
FDPS-210ENST00000474345 PNMA1Q8ND90 353 aa17.79■□□□□ 0.44
FDPS-210ENST00000474345 CD99L2Q8TCZ2 262 aa17.79■□□□□ 0.44
FDPS-210ENST00000474345 GTF3C2Q8WUA4 911 aaPredicted RBP17.79■□□□□ 0.44
FDPS-210ENST00000474345 DCAF4Q8WV16 495 aa17.79■□□□□ 0.44
FDPS-210ENST00000474345 ATG4CQ96DT6 458 aa17.79■□□□□ 0.44
FDPS-210ENST00000474345 ERO1AQ96HE7 468 aa17.79■□□□□ 0.44
FDPS-210ENST00000474345 MTA3Q9BTC8 594 aa17.79■□□□□ 0.44
FDPS-210ENST00000474345 KAT14Q9H8E8 782 aa17.79■□□□□ 0.44
FDPS-210ENST00000474345 GPHNQ9NQX3 736 aaPredicted RBP17.79■□□□□ 0.44
FDPS-210ENST00000474345 BTBD7Q9P203 1132 aa17.79■□□□□ 0.44
FDPS-210ENST00000474345 RABGAP1Q9Y3P9 1069 aa17.79■□□□□ 0.44
FDPS-210ENST00000474345 MYPNQ86TC9 1320 aa17.78■□□□□ 0.44
FDPS-210ENST00000474345 TMEM232C9JQI7 657 aa17.78■□□□□ 0.44
FDPS-210ENST00000474345 EIF5BO60841 1220 aaKnown RBP17.78■□□□□ 0.44
FDPS-210ENST00000474345 ECM2O94769 699 aaPredicted RBP17.78■□□□□ 0.44
FDPS-210ENST00000474345 SNHG28P0DPA3 235 aa17.78■□□□□ 0.44
FDPS-210ENST00000474345 PDHBP11177 359 aa17.78■□□□□ 0.44
FDPS-210ENST00000474345 LACTBP83111 547 aaPredicted RBP17.78■□□□□ 0.44
FDPS-210ENST00000474345 WTAPQ15007 396 aa17.78■□□□□ 0.44
FDPS-210ENST00000474345 TMEM67Q5HYA8 995 aa17.78■□□□□ 0.44
FDPS-210ENST00000474345 TTBK2Q6IQ55 1244 aa17.78■□□□□ 0.44
FDPS-210ENST00000474345 SAMD1Q6SPF0 538 aaPredicted RBP17.78■□□□□ 0.44
FDPS-210ENST00000474345 DHX32Q7L7V1 743 aaKnown RBP17.78■□□□□ 0.44
FDPS-210ENST00000474345 GPRC5AQ8NFJ5 357 aa17.78■□□□□ 0.44
FDPS-210ENST00000474345 SLF1Q9BQI6 1058 aa17.78■□□□□ 0.44
FDPS-210ENST00000474345 PAGR1Q9BTK6 254 aa17.78■□□□□ 0.44
FDPS-210ENST00000474345 ARHGAP39Q9C0H5 1083 aa17.78■□□□□ 0.44
FDPS-210ENST00000474345 FEM1BQ9UK73 627 aa17.78■□□□□ 0.44
FDPS-210ENST00000474345 PPP1R9AQ9ULJ8 1098 aa17.78■□□□□ 0.44
FDPS-210ENST00000474345 ERICH2A1L162 156 aa17.77■□□□□ 0.44
FDPS-210ENST00000474345 PLA2G6O60733 806 aa17.77■□□□□ 0.44
FDPS-210ENST00000474345 SART3Q15020 963 aaKnown RBP17.77■□□□□ 0.44
FDPS-210ENST00000474345 PRPF38AQ8NAV1 312 aaKnown RBP17.77■□□□□ 0.44
FDPS-210ENST00000474345 CHURC1Q8WUH1 139 aa17.77■□□□□ 0.44
FDPS-210ENST00000474345 TMEM87BQ96K49 555 aa17.77■□□□□ 0.44
FDPS-210ENST00000474345 LRRC2Q9BYS8 371 aa17.77■□□□□ 0.44
FDPS-210ENST00000474345 DOCK3Q8IZD9 2030 aa17.77■□□□□ 0.43
FDPS-210ENST00000474345 PSMC4P43686 418 aa17.76■□□□□ 0.43
FDPS-210ENST00000474345 ERVK-9P63128 1117 aa17.76■□□□□ 0.43
FDPS-210ENST00000474345 ERVK-24P63145 666 aa17.76■□□□□ 0.43
FDPS-210ENST00000474345 KIF22Q14807 665 aa17.76■□□□□ 0.43
FDPS-210ENST00000474345 COL13A1Q5TAT6 717 aaPredicted RBP17.76■□□□□ 0.43
FDPS-210ENST00000474345 JAKMIP1Q96N16 626 aaKnown RBP17.76■□□□□ 0.43
FDPS-210ENST00000474345 LY9Q9HBG7 655 aa17.76■□□□□ 0.43
FDPS-210ENST00000474345 GPCPD1Q9NPB8 672 aa17.76■□□□□ 0.43
FDPS-210ENST00000474345 MGAMO43451 1857 aa17.75■□□□□ 0.43
FDPS-210ENST00000474345 FRMPD2Q68DX3 1309 aaPredicted RBP17.75■□□□□ 0.43
FDPS-210ENST00000474345 ZSWIM8A7E2V4 1837 aa17.75■□□□□ 0.43
FDPS-210ENST00000474345 COL11A1P12107 1806 aaPredicted RBP17.75■□□□□ 0.43
FDPS-210ENST00000474345 VWA5AO00534 786 aa17.75■□□□□ 0.43
FDPS-210ENST00000474345 SH2B2O14492 632 aaPredicted RBP17.75■□□□□ 0.43
FDPS-210ENST00000474345 HMGB1P09429 215 aaKnown RBP17.75■□□□□ 0.43
FDPS-210ENST00000474345 GOLGA8HP0CJ92 632 aa17.75■□□□□ 0.43
FDPS-210ENST00000474345 CPA1P15085 419 aa17.75■□□□□ 0.43
FDPS-210ENST00000474345 ZNF543Q08ER8 600 aa17.75■□□□□ 0.43
FDPS-210ENST00000474345 TMEM132BQ14DG7 1078 aa17.75■□□□□ 0.43
FDPS-210ENST00000474345 CCDC96Q2M329 555 aa17.75■□□□□ 0.43
FDPS-210ENST00000474345 BTNL9Q6UXG8 535 aa17.75■□□□□ 0.43
FDPS-210ENST00000474345 FAM160B2Q86V87 743 aa17.75■□□□□ 0.43
FDPS-210ENST00000474345 TMTC2Q8N394 836 aa17.75■□□□□ 0.43
FDPS-210ENST00000474345 MB21D1Q8N884 522 aa17.75■□□□□ 0.43
FDPS-210ENST00000474345 REPS2Q8NFH8 660 aa17.75■□□□□ 0.43
FDPS-210ENST00000474345 KIFC2Q96AC6 838 aa17.75■□□□□ 0.43
FDPS-210ENST00000474345 TCEANC2Q96MN5 208 aa17.75■□□□□ 0.43
FDPS-210ENST00000474345 EFCC1Q9HA90 598 aa17.75■□□□□ 0.43
FDPS-210ENST00000474345 ISY1Q9ULR0 285 aaKnown RBP17.75■□□□□ 0.43
FDPS-210ENST00000474345 WDR19Q8NEZ3 1342 aa17.74■□□□□ 0.43
FDPS-210ENST00000474345 FMNL1O95466 1100 aaPredicted RBP17.74■□□□□ 0.43
FDPS-210ENST00000474345 PSMA5P28066 241 aa17.74■□□□□ 0.43
FDPS-210ENST00000474345 SLC16A2P36021 539 aa17.74■□□□□ 0.43
FDPS-210ENST00000474345 LIFRP42702 1097 aa17.74■□□□□ 0.43
FDPS-210ENST00000474345 STAT2P52630 851 aa17.74■□□□□ 0.43
FDPS-210ENST00000474345 CTU1Q7Z7A3 348 aaKnown RBP17.74■□□□□ 0.43
FDPS-210ENST00000474345 TRIM47Q96LD4 638 aa17.74■□□□□ 0.43
FDPS-210ENST00000474345 PORCNQ9H237 461 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms