RNA–Protein interactions for RNA: ENST00000470585.5

SF3A3-205, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-205ENST00000470585 TRMT2AQ8IZ69 625 aaKnown RBP8.29□□□□□ -1.08
SF3A3-205ENST00000470585 IL27Q8NEV9 243 aa8.29□□□□□ -1.08
SF3A3-205ENST00000470585 SLC39A7Q92504 469 aa8.29□□□□□ -1.08
SF3A3-205ENST00000470585 MEIS3Q99687 375 aa8.29□□□□□ -1.08
SF3A3-205ENST00000470585 TMEM39AQ9NV64 488 aa8.29□□□□□ -1.08
SF3A3-205ENST00000470585 CXXC1Q9P0U4 656 aaPredicted RBP8.29□□□□□ -1.08
SF3A3-205ENST00000470585 ZNFX1Q9P2E3 1918 aaKnown RBP8.29□□□□□ -1.08
SF3A3-205ENST00000470585 A0A1W2PQ45 241 aaPredicted RBP8.28□□□□□ -1.08
SF3A3-205ENST00000470585 A0A1W2PQY0 241 aa8.28□□□□□ -1.08
SF3A3-205ENST00000470585 COBLO75128 1261 aa8.28□□□□□ -1.08
SF3A3-205ENST00000470585 GNAI2P04899 355 aa8.28□□□□□ -1.08
SF3A3-205ENST00000470585 CYP2E1P05181 493 aaPredicted RBP8.28□□□□□ -1.08
SF3A3-205ENST00000470585 USP5P45974 858 aa8.28□□□□□ -1.08
SF3A3-205ENST00000470585 FAM47AQ5JRC9 791 aa8.28□□□□□ -1.08
SF3A3-205ENST00000470585 TMEM179Q6ZVK1 233 aa8.28□□□□□ -1.08
SF3A3-205ENST00000470585 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.28□□□□□ -1.08
SF3A3-205ENST00000470585 SH3RF1Q7Z6J0 888 aa8.28□□□□□ -1.08
SF3A3-205ENST00000470585 TMEM199Q8N511 208 aa8.28□□□□□ -1.08
SF3A3-205ENST00000470585 PCSK9Q8NBP7 692 aaKnown RBP8.28□□□□□ -1.08
SF3A3-205ENST00000470585 SLC44A5Q8NCS7 719 aa8.28□□□□□ -1.08
SF3A3-205ENST00000470585 ADAMTS19Q8TE59 1207 aa8.28□□□□□ -1.08
SF3A3-205ENST00000470585 UHRF1Q96T88 793 aaPredicted RBP8.28□□□□□ -1.08
SF3A3-205ENST00000470585 TINF2Q9BSI4 451 aa8.28□□□□□ -1.08
SF3A3-205ENST00000470585 SWAP70Q9UH65 585 aa8.28□□□□□ -1.08
SF3A3-205ENST00000470585 TBX21Q9UL17 535 aa8.28□□□□□ -1.08
SF3A3-205ENST00000470585 ADAMTS5Q9UNA0 930 aa8.28□□□□□ -1.08
SF3A3-205ENST00000470585 WDR46O15213 610 aaKnown RBP8.27□□□□□ -1.09
SF3A3-205ENST00000470585 IPO8O15397 1037 aaKnown RBP8.27□□□□□ -1.09
SF3A3-205ENST00000470585 ADAMTS4O75173 837 aa8.27□□□□□ -1.09
SF3A3-205ENST00000470585 POU3F3P20264 500 aaPredicted RBP8.27□□□□□ -1.09
SF3A3-205ENST00000470585 ITGB8P26012 769 aa8.27□□□□□ -1.09
SF3A3-205ENST00000470585 SHMT1P34896 483 aa8.27□□□□□ -1.09
SF3A3-205ENST00000470585 NKX3-2P78367 333 aa8.27□□□□□ -1.09
SF3A3-205ENST00000470585 FAAP100Q0VG06 881 aa8.27□□□□□ -1.09
SF3A3-205ENST00000470585 MAP3K12Q12852 859 aa8.27□□□□□ -1.09
SF3A3-205ENST00000470585 TNNI3KQ59H18 835 aa8.27□□□□□ -1.09
SF3A3-205ENST00000470585 ZNF467Q7Z7K2 595 aaPredicted RBP8.27□□□□□ -1.09
SF3A3-205ENST00000470585 ADGRA1Q86SQ6 560 aa8.27□□□□□ -1.09
SF3A3-205ENST00000470585 RIOX2Q8IUF8 465 aa8.27□□□□□ -1.09
SF3A3-205ENST00000470585 MAGEB6Q8N7X4 407 aa8.27□□□□□ -1.09
SF3A3-205ENST00000470585 USP38Q8NB14 1042 aa8.27□□□□□ -1.09
SF3A3-205ENST00000470585 KLHDC9Q8NEP7 349 aa8.27□□□□□ -1.09
SF3A3-205ENST00000470585 ACER1Q8TDN7 264 aa8.27□□□□□ -1.09
SF3A3-205ENST00000470585 CCDC17Q96LX7 622 aa8.27□□□□□ -1.09
SF3A3-205ENST00000470585 STARD7Q9NQZ5 370 aa8.27□□□□□ -1.09
SF3A3-205ENST00000470585 MSRAQ9UJ68 235 aa8.27□□□□□ -1.09
SF3A3-205ENST00000470585 NOB1Q9ULX3 412 aaKnown RBP8.27□□□□□ -1.09
SF3A3-205ENST00000470585 CNPY2Q9Y2B0 182 aa8.27□□□□□ -1.09
SF3A3-205ENST00000470585 TMX2Q9Y320 296 aa8.27□□□□□ -1.09
SF3A3-205ENST00000470585 FPGT-TNNI3KV9GXZ4 949 aa8.27□□□□□ -1.09
SF3A3-205ENST00000470585 TRANK1O15050 2925 aa8.27□□□□□ -1.09
SF3A3-205ENST00000470585 CHD7Q9P2D1 2997 aa8.26□□□□□ -1.09
SF3A3-205ENST00000470585 TLR3O15455 904 aaKnown RBP8.26□□□□□ -1.09
SF3A3-205ENST00000470585 PQBP1O60828 265 aaKnown RBP8.26□□□□□ -1.09
SF3A3-205ENST00000470585 DUSP11O75319 330 aaKnown RBP8.26□□□□□ -1.09
SF3A3-205ENST00000470585 CYP7A1P22680 504 aa8.26□□□□□ -1.09
SF3A3-205ENST00000470585 GUCY1A2P33402 732 aa8.26□□□□□ -1.09
SF3A3-205ENST00000470585 CDK7P50613 346 aa8.26□□□□□ -1.09
SF3A3-205ENST00000470585 ACLYP53396 1101 aa8.26□□□□□ -1.09
SF3A3-205ENST00000470585 EPHB4P54760 987 aa8.26□□□□□ -1.09
SF3A3-205ENST00000470585 KCTD2Q14681 263 aa8.26□□□□□ -1.09
SF3A3-205ENST00000470585 TTF1Q15361 905 aaPredicted RBP8.26□□□□□ -1.09
SF3A3-205ENST00000470585 ZYXQ15942 572 aaKnown RBP8.26□□□□□ -1.09
SF3A3-205ENST00000470585 SHROOM1Q2M3G4 852 aaPredicted RBP8.26□□□□□ -1.09
SF3A3-205ENST00000470585 ZNF792Q3KQV3 632 aa8.26□□□□□ -1.09
SF3A3-205ENST00000470585 TMEM240Q5SV17 173 aa8.26□□□□□ -1.09
SF3A3-205ENST00000470585 CCSAPQ6IQ19 270 aaPredicted RBP8.26□□□□□ -1.09
SF3A3-205ENST00000470585 MAMDC4Q6UXC1 1216 aa8.26□□□□□ -1.09
SF3A3-205ENST00000470585 CCDC129Q6ZRS4 1044 aa8.26□□□□□ -1.09
SF3A3-205ENST00000470585 HERVK_113Q902F9 699 aa8.26□□□□□ -1.09
SF3A3-205ENST00000470585 GLT1D1Q96MS3 346 aa8.26□□□□□ -1.09
SF3A3-205ENST00000470585 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.26□□□□□ -1.092e-7■■■■□ 20.3
SF3A3-205ENST00000470585 PBX4Q9BYU1 374 aa8.26□□□□□ -1.09
SF3A3-205ENST00000470585 UPF3AQ9H1J1 476 aaKnown RBP8.26□□□□□ -1.09
SF3A3-205ENST00000470585 VCPKMTQ9H867 229 aa8.26□□□□□ -1.09
SF3A3-205ENST00000470585 SPC25Q9HBM1 224 aa8.26□□□□□ -1.09
SF3A3-205ENST00000470585 ARHGEF10LQ9HCE6 1279 aa8.26□□□□□ -1.09
SF3A3-205ENST00000470585 SAP30BPQ9UHR5 308 aaKnown RBP8.26□□□□□ -1.09
SF3A3-205ENST00000470585 FAM184BQ9ULE4 1060 aa8.26□□□□□ -1.09
SF3A3-205ENST00000470585 HCN4Q9Y3Q4 1203 aa8.26□□□□□ -1.09
SF3A3-205ENST00000470585 NDUFB9Q9Y6M9 179 aa8.26□□□□□ -1.09
SF3A3-205ENST00000470585 PARP14Q460N5 1801 aa8.26□□□□□ -1.09
SF3A3-205ENST00000470585 PLXNA1Q9UIW2 1896 aa8.26□□□□□ -1.09
SF3A3-205ENST00000470585 A0A0U1RQG5 324 aaPredicted RBP8.25□□□□□ -1.09
SF3A3-205ENST00000470585 ATP2A1O14983 1001 aa8.25□□□□□ -1.09
SF3A3-205ENST00000470585 CABYRO75952 493 aa8.25□□□□□ -1.09
SF3A3-205ENST00000470585 FLOT1O75955 427 aa8.25□□□□□ -1.09
SF3A3-205ENST00000470585 PFKMP08237 780 aa8.25□□□□□ -1.09
SF3A3-205ENST00000470585 ZNF865P0CJ78 1059 aaPredicted RBP8.25□□□□□ -1.09
SF3A3-205ENST00000470585 ZAP70P43403 619 aa8.25□□□□□ -1.09
SF3A3-205ENST00000470585 MAMSTRQ6ZN01 415 aa8.25□□□□□ -1.09
SF3A3-205ENST00000470585 NCAPG2Q86XI2 1143 aa8.25□□□□□ -1.09
SF3A3-205ENST00000470585 SSH3Q8TE77 659 aa8.25□□□□□ -1.09
SF3A3-205ENST00000470585 FERMT2Q96AC1 680 aa8.25□□□□□ -1.09
SF3A3-205ENST00000470585 MMP19Q99542 508 aa8.25□□□□□ -1.09
SF3A3-205ENST00000470585 CRNKL1Q9BZJ0 848 aaKnown RBP8.25□□□□□ -1.09
SF3A3-205ENST00000470585 COG5Q9UP83 839 aa8.25□□□□□ -1.09
SF3A3-205ENST00000470585 NOP58Q9Y2X3 529 aaKnown RBP8.25□□□□□ -1.09
SF3A3-205ENST00000470585 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.25□□□□□ -1.09
SF3A3-205ENST00000470585 BRWD1Q9NSI6 2320 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms