RNA–Protein interactions for RNA: ENST00000468777.5

PCCB-208, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene PCCB, Length 1,877 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-208ENST00000468777 USP17L19D6RCP7 530 aa22.32■■□□□ 1.16
PCCB-208ENST00000468777 USP17L20D6RJB6 530 aa22.32■■□□□ 1.16
PCCB-208ENST00000468777 SLC1A4P43007 532 aa22.32■■□□□ 1.16
PCCB-208ENST00000468777 SLC4A3P48751 1232 aa22.32■■□□□ 1.16
PCCB-208ENST00000468777 IRX3P78415 501 aaPredicted RBP22.32■■□□□ 1.16
PCCB-208ENST00000468777 USP17L24Q0WX57 530 aa22.32■■□□□ 1.16
PCCB-208ENST00000468777 CATSPERGQ6ZRH7 1159 aa22.32■■□□□ 1.16
PCCB-208ENST00000468777 KCTD1Q719H9 257 aa22.32■■□□□ 1.16
PCCB-208ENST00000468777 RUFY3Q7L099 469 aa22.32■■□□□ 1.16
PCCB-208ENST00000468777 KIF2CQ99661 725 aa22.32■■□□□ 1.16
PCCB-208ENST00000468777 PARP14Q460N5 1801 aa22.32■■□□□ 1.16
PCCB-208ENST00000468777 ALDH1A1P00352 501 aa22.32■■□□□ 1.16
PCCB-208ENST00000468777 PDHBP11177 359 aa22.32■■□□□ 1.16
PCCB-208ENST00000468777 PABPC4Q13310 644 aaKnown RBP eCLIP22.32■■□□□ 1.16
PCCB-208ENST00000468777 SLC45A1Q9Y2W3 748 aa22.32■■□□□ 1.16
PCCB-208ENST00000468777 CYP46A1Q9Y6A2 500 aa22.32■■□□□ 1.16
PCCB-208ENST00000468777 FRMPD2Q68DX3 1309 aaPredicted RBP22.31■■□□□ 1.16
PCCB-208ENST00000468777 RLFQ13129 1914 aa22.31■■□□□ 1.16
PCCB-208ENST00000468777 BMP3P12645 472 aa22.31■■□□□ 1.16
PCCB-208ENST00000468777 NFXL1Q6ZNB6 911 aa22.31■■□□□ 1.16
PCCB-208ENST00000468777 Q6ZUG5 572 aa22.31■■□□□ 1.16
PCCB-208ENST00000468777 SMCR8Q8TEV9 937 aaPredicted RBP22.31■■□□□ 1.16
PCCB-208ENST00000468777 GMCL1Q96IK5 515 aa22.31■■□□□ 1.16
PCCB-208ENST00000468777 PARK7Q99497 189 aaKnown RBP22.31■■□□□ 1.16
PCCB-208ENST00000468777 P2RX7Q99572 595 aaKnown RBP22.31■■□□□ 1.16
PCCB-208ENST00000468777 MYL10Q9BUA6 226 aa22.31■■□□□ 1.16
PCCB-208ENST00000468777 TM6SF1Q9BZW5 370 aa22.31■■□□□ 1.16
PCCB-208ENST00000468777 ZCCHC17Q9NP64 241 aaKnown RBP22.31■■□□□ 1.16
PCCB-208ENST00000468777 WDR19Q8NEZ3 1342 aa22.31■■□□□ 1.16
PCCB-208ENST00000468777 CA12O43570 354 aa22.3■■□□□ 1.16
PCCB-208ENST00000468777 PEX10O60683 326 aa22.3■■□□□ 1.16
PCCB-208ENST00000468777 FLOT1O75955 427 aa22.3■■□□□ 1.16
PCCB-208ENST00000468777 OSBPP22059 807 aa22.3■■□□□ 1.16
PCCB-208ENST00000468777 FGD1P98174 961 aa22.3■■□□□ 1.16
PCCB-208ENST00000468777 CCDC96Q2M329 555 aa22.3■■□□□ 1.16
PCCB-208ENST00000468777 RAB11FIP4Q86YS3 637 aa22.3■■□□□ 1.16
PCCB-208ENST00000468777 MTA3Q9BTC8 594 aa22.3■■□□□ 1.16
PCCB-208ENST00000468777 PNMA3Q9UL41 463 aa22.3■■□□□ 1.16
PCCB-208ENST00000468777 GOLGA8HP0CJ92 632 aa22.3■■□□□ 1.16
PCCB-208ENST00000468777 LIFRP42702 1097 aa22.29■■□□□ 1.16
PCCB-208ENST00000468777 HERVK_113P62684 666 aa22.29■■□□□ 1.16
PCCB-208ENST00000468777 ZFYVE28Q9HCC9 887 aa22.29■■□□□ 1.16
PCCB-208ENST00000468777 CCDC69A6NI79 296 aa22.28■■□□□ 1.16
PCCB-208ENST00000468777 TMEM232C9JQI7 657 aa22.28■■□□□ 1.16
PCCB-208ENST00000468777 HSPA1AP0DMV8 641 aaKnown RBP22.28■■□□□ 1.16
PCCB-208ENST00000468777 HSPA1BP0DMV9 641 aaKnown RBP22.28■■□□□ 1.16
PCCB-208ENST00000468777 SNHG28P0DPA3 235 aa22.28■■□□□ 1.16
PCCB-208ENST00000468777 RXRAP19793 462 aa22.28■■□□□ 1.16
PCCB-208ENST00000468777 TTBK2Q6IQ55 1244 aa22.28■■□□□ 1.16
PCCB-208ENST00000468777 POTEEQ6S8J3 1075 aa22.28■■□□□ 1.16
PCCB-208ENST00000468777 DCAF4Q8WV16 495 aa22.28■■□□□ 1.16
PCCB-208ENST00000468777 BRF1Q92994 677 aa22.28■■□□□ 1.16
PCCB-208ENST00000468777 IL17RAQ96F46 866 aa22.28■■□□□ 1.16
PCCB-208ENST00000468777 GPCPD1Q9NPB8 672 aa22.28■■□□□ 1.16
PCCB-208ENST00000468777 CPA4Q9UI42 421 aa22.28■■□□□ 1.16
PCCB-208ENST00000468777 CENPFP49454 3210 aa22.28■■□□□ 1.16
PCCB-208ENST00000468777 SPDYE16A6NNV3 312 aaPredicted RBP22.28■■□□□ 1.16
PCCB-208ENST00000468777 TROAPQ12815 778 aa22.28■■□□□ 1.16
PCCB-208ENST00000468777 IKQ13123 557 aaPredicted RBP22.28■■□□□ 1.16
PCCB-208ENST00000468777 COG2Q14746 738 aa22.28■■□□□ 1.16
PCCB-208ENST00000468777 ZNF654Q8IZM8 581 aa22.28■■□□□ 1.16
PCCB-208ENST00000468777 NUP133Q8WUM0 1156 aa22.28■■□□□ 1.16
PCCB-208ENST00000468777 LARP6Q9BRS8 491 aaKnown RBP22.28■■□□□ 1.16
PCCB-208ENST00000468777 SAGE1Q9NXZ1 904 aa22.28■■□□□ 1.16
PCCB-208ENST00000468777 TLR2O60603 784 aa22.27■■□□□ 1.16
PCCB-208ENST00000468777 CATIPQ7Z7H3 387 aa22.27■■□□□ 1.16
PCCB-208ENST00000468777 SGMS1Q86VZ5 419 aa22.27■■□□□ 1.16
PCCB-208ENST00000468777 ATG4CQ96DT6 458 aa22.27■■□□□ 1.16
PCCB-208ENST00000468777 CPVLQ9H3G5 476 aa22.27■■□□□ 1.16
PCCB-208ENST00000468777 BRPF3Q9ULD4 1205 aa22.27■■□□□ 1.16
PCCB-208ENST00000468777 ADGRA2Q96PE1 1338 aa22.27■■□□□ 1.16
PCCB-208ENST00000468777 SLC16A2P36021 539 aa22.26■■□□□ 1.15
PCCB-208ENST00000468777 ZNF543Q08ER8 600 aa22.26■■□□□ 1.15
PCCB-208ENST00000468777 APOBRQ0VD83 1088 aa22.26■■□□□ 1.15
PCCB-208ENST00000468777 CCDC144CPQ8IYA2 1237 aa22.26■■□□□ 1.15
PCCB-208ENST00000468777 TMTC2Q8N394 836 aa22.26■■□□□ 1.15
PCCB-208ENST00000468777 ANKRD13CQ8N6S4 541 aa22.26■■□□□ 1.15
PCCB-208ENST00000468777 KIFC2Q96AC6 838 aa22.26■■□□□ 1.15
PCCB-208ENST00000468777 PDRG1Q9NUG6 133 aa22.26■■□□□ 1.15
PCCB-208ENST00000468777 SLC12A7Q9Y666 1083 aa22.26■■□□□ 1.15
PCCB-208ENST00000468777 COL11A1P12107 1806 aaPredicted RBP22.26■■□□□ 1.15
PCCB-208ENST00000468777 FOXN1O15353 648 aa22.26■■□□□ 1.15
PCCB-208ENST00000468777 STAT2P52630 851 aa22.26■■□□□ 1.15
PCCB-208ENST00000468777 TOB2Q14106 344 aaPredicted RBP22.26■■□□□ 1.15
PCCB-208ENST00000468777 MICU3Q86XE3 530 aa22.26■■□□□ 1.15
PCCB-208ENST00000468777 STAG2Q8N3U4 1231 aa22.26■■□□□ 1.15
PCCB-208ENST00000468777 SLF1Q9BQI6 1058 aa22.26■■□□□ 1.15
PCCB-208ENST00000468777 PAGR1Q9BTK6 254 aa22.26■■□□□ 1.15
PCCB-208ENST00000468777 TXNRD2Q9NNW7 524 aa22.26■■□□□ 1.15
PCCB-208ENST00000468777 PPP1R9AQ9ULJ8 1098 aa22.26■■□□□ 1.15
PCCB-208ENST00000468777 NAP1L2Q9ULW6 460 aaPredicted RBP22.26■■□□□ 1.15
PCCB-208ENST00000468777 KLF18A0A0U1RQI7 1052 aa22.25■■□□□ 1.15
PCCB-208ENST00000468777 ECM2O94769 699 aaPredicted RBP22.25■■□□□ 1.15
PCCB-208ENST00000468777 DSG3P32926 999 aa22.25■■□□□ 1.15
PCCB-208ENST00000468777 NEK4P51957 841 aa22.25■■□□□ 1.15
PCCB-208ENST00000468777 CFHR5Q9BXR6 569 aa22.25■■□□□ 1.15
PCCB-208ENST00000468777 FEM1BQ9UK73 627 aa22.25■■□□□ 1.15
PCCB-208ENST00000468777 PARP1P09874 1014 aaKnown RBP22.24■■□□□ 1.15
PCCB-208ENST00000468777 RABEP1Q15276 862 aa22.24■■□□□ 1.15
PCCB-208ENST00000468777 APOA5Q6Q788 366 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms