RNA–Protein interactions for RNA: ENST00000466861.1

SUMO3-205, Transcript of small ubiquitin-like modifier 3, humanhuman

TSL 2

Gene SUMO3, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-205ENST00000466861 FEM1BQ9UK73 627 aa27.43■■□□□ 1.98
SUMO3-205ENST00000466861 DOCK3Q8IZD9 2030 aa27.42■■□□□ 1.98
SUMO3-205ENST00000466861 E7EWF7 191 aa27.42■■□□□ 1.98
SUMO3-205ENST00000466861 RAD21O60216 631 aa27.42■■□□□ 1.98
SUMO3-205ENST00000466861 REC8O95072 547 aa27.42■■□□□ 1.98
SUMO3-205ENST00000466861 FMNL1O95466 1100 aaPredicted RBP27.42■■□□□ 1.98
SUMO3-205ENST00000466861 BMP3P12645 472 aa27.42■■□□□ 1.98
SUMO3-205ENST00000466861 RALYLQ86SE5 291 aaKnown RBP27.42■■□□□ 1.98
SUMO3-205ENST00000466861 ZSCAN10Q96SZ4 725 aaPredicted RBP27.42■■□□□ 1.98
SUMO3-205ENST00000466861 TMEM47Q9BQJ4 181 aa27.42■■□□□ 1.98
SUMO3-205ENST00000466861 PPP1R9AQ9ULJ8 1098 aa27.42■■□□□ 1.98
SUMO3-205ENST00000466861 FDX1P10109 184 aa27.41■■□□□ 1.98
SUMO3-205ENST00000466861 MAPK4P31152 587 aa27.41■■□□□ 1.98
SUMO3-205ENST00000466861 CAP1Q01518 475 aa27.41■■□□□ 1.98
SUMO3-205ENST00000466861 CREB3L3Q68CJ9 461 aa27.41■■□□□ 1.98
SUMO3-205ENST00000466861 POTEEQ6S8J3 1075 aa27.41■■□□□ 1.98
SUMO3-205ENST00000466861 PRPF38AQ8NAV1 312 aaKnown RBP27.41■■□□□ 1.98
SUMO3-205ENST00000466861 DCAF4Q8WV16 495 aa27.41■■□□□ 1.98
SUMO3-205ENST00000466861 UBAC1Q9BSL1 405 aa27.41■■□□□ 1.98
SUMO3-205ENST00000466861 MTA3Q9BTC8 594 aa27.41■■□□□ 1.98
SUMO3-205ENST00000466861 ARHGAP39Q9C0H5 1083 aa27.41■■□□□ 1.98
SUMO3-205ENST00000466861 SRRDQ9UH36 339 aa27.41■■□□□ 1.98
SUMO3-205ENST00000466861 PTPN22Q9Y2R2 807 aa27.41■■□□□ 1.98
SUMO3-205ENST00000466861 SLC27A2O14975 620 aa27.4■■□□□ 1.98
SUMO3-205ENST00000466861 CTGFP29279 349 aa27.4■■□□□ 1.98
SUMO3-205ENST00000466861 SLC1A4P43007 532 aa27.4■■□□□ 1.98
SUMO3-205ENST00000466861 FAM160B2Q86V87 743 aa27.4■■□□□ 1.98
SUMO3-205ENST00000466861 NKX2-3Q8TAU0 364 aa27.4■■□□□ 1.98
SUMO3-205ENST00000466861 COA7Q96BR5 231 aa27.4■■□□□ 1.98
SUMO3-205ENST00000466861 SLF1Q9BQI6 1058 aa27.4■■□□□ 1.98
SUMO3-205ENST00000466861 PAGR1Q9BTK6 254 aa27.4■■□□□ 1.98
SUMO3-205ENST00000466861 CNMDO75829 334 aa27.39■■□□□ 1.98
SUMO3-205ENST00000466861 TSGA10IPQ3SY00 556 aa27.39■■□□□ 1.98
SUMO3-205ENST00000466861 CHURC1Q8WUH1 139 aa27.39■■□□□ 1.98
SUMO3-205ENST00000466861 ZSWIM8A7E2V4 1837 aa27.39■■□□□ 1.97
SUMO3-205ENST00000466861 TNPO2O14787 897 aaKnown RBP27.38■■□□□ 1.97
SUMO3-205ENST00000466861 Q3C1V9 767 aa27.38■■□□□ 1.97
SUMO3-205ENST00000466861 SHCBP1Q8NEM2 672 aa27.38■■□□□ 1.97
SUMO3-205ENST00000466861 ATG4CQ96DT6 458 aa27.38■■□□□ 1.97
SUMO3-205ENST00000466861 NUP88Q99567 741 aaPredicted RBP27.38■■□□□ 1.97
SUMO3-205ENST00000466861 BTBD7Q9P203 1132 aa27.38■■□□□ 1.97
SUMO3-205ENST00000466861 VWA5AO00534 786 aa27.37■■□□□ 1.97
SUMO3-205ENST00000466861 EIF5BO60841 1220 aaKnown RBP27.37■■□□□ 1.97
SUMO3-205ENST00000466861 STAT2P52630 851 aa27.37■■□□□ 1.97
SUMO3-205ENST00000466861 SART3Q15020 963 aaKnown RBP27.37■■□□□ 1.97
SUMO3-205ENST00000466861 STOX1Q6ZVD7 989 aa27.37■■□□□ 1.97
SUMO3-205ENST00000466861 ENAHQ8N8S7 591 aaPredicted RBP27.37■■□□□ 1.97
SUMO3-205ENST00000466861 FBXO28Q9NVF7 368 aa27.37■■□□□ 1.97
SUMO3-205ENST00000466861 TNKSO95271 1327 aa27.37■■□□□ 1.97
SUMO3-205ENST00000466861 SNHG28P0DPA3 235 aa27.36■■□□□ 1.97
SUMO3-205ENST00000466861 MCCP23508 829 aa27.36■■□□□ 1.97
SUMO3-205ENST00000466861 COPB2P35606 906 aa27.36■■□□□ 1.97
SUMO3-205ENST00000466861 SEC23AQ15436 765 aa27.36■■□□□ 1.97
SUMO3-205ENST00000466861 CCAR1Q8IX12 1150 aaKnown RBP27.36■■□□□ 1.97
SUMO3-205ENST00000466861 MB21D2Q8IYB1 491 aaPredicted RBP27.36■■□□□ 1.97
SUMO3-205ENST00000466861 ZKSCAN3Q9BRR0 538 aa27.36■■□□□ 1.97
SUMO3-205ENST00000466861 SPATC1LQ9H0A9 340 aa27.36■■□□□ 1.97
SUMO3-205ENST00000466861 KAT14Q9H8E8 782 aa27.36■■□□□ 1.97
SUMO3-205ENST00000466861 TAF6LQ9Y6J9 622 aa27.36■■□□□ 1.97
SUMO3-205ENST00000466861 COL11A1P12107 1806 aaPredicted RBP27.35■■□□□ 1.97
SUMO3-205ENST00000466861 ERICH2A1L162 156 aa27.35■■□□□ 1.97
SUMO3-205ENST00000466861 ZKSCAN1P17029 563 aaPredicted RBP27.35■■□□□ 1.97
SUMO3-205ENST00000466861 IRF5Q13568 498 aa27.35■■□□□ 1.97
SUMO3-205ENST00000466861 KRT32Q14532 448 aa27.35■■□□□ 1.97
SUMO3-205ENST00000466861 CYB5R4Q7L1T6 521 aa27.35■■□□□ 1.97
SUMO3-205ENST00000466861 ATP2A1O14983 1001 aa27.34■■□□□ 1.97
SUMO3-205ENST00000466861 SLC25A27O95847 323 aa27.34■■□□□ 1.97
SUMO3-205ENST00000466861 PDHBP11177 359 aa27.34■■□□□ 1.97
SUMO3-205ENST00000466861 IFIT1BQ5T764 474 aaKnown RBP27.34■■□□□ 1.97
SUMO3-205ENST00000466861 BTNL9Q6UXG8 535 aa27.34■■□□□ 1.97
SUMO3-205ENST00000466861 PNMA1Q8ND90 353 aa27.34■■□□□ 1.97
SUMO3-205ENST00000466861 SOCS4Q8WXH5 440 aa27.34■■□□□ 1.97
SUMO3-205ENST00000466861 KCNB2Q92953 911 aa27.34■■□□□ 1.97
SUMO3-205ENST00000466861 ABHD8Q96I13 439 aa27.34■■□□□ 1.97
SUMO3-205ENST00000466861 TMEM232C9JQI7 657 aa27.33■■□□□ 1.97
SUMO3-205ENST00000466861 OAZ1P54368 228 aa27.33■■□□□ 1.97
SUMO3-205ENST00000466861 GPATCH4Q5T3I0 446 aaKnown RBP27.33■■□□□ 1.97
SUMO3-205ENST00000466861 REPS2Q8NFH8 660 aa27.33■■□□□ 1.97
SUMO3-205ENST00000466861 PORCNQ9H237 461 aa27.33■■□□□ 1.97
SUMO3-205ENST00000466861 MROH8Q9H579 483 aa27.33■■□□□ 1.97
SUMO3-205ENST00000466861 HPS5Q9UPZ3 1129 aa27.33■■□□□ 1.97
SUMO3-205ENST00000466861 ZBED4O75132 1171 aa27.32■■□□□ 1.96
SUMO3-205ENST00000466861 MCM5P33992 734 aa27.32■■□□□ 1.96
SUMO3-205ENST00000466861 TMEM132BQ14DG7 1078 aa27.32■■□□□ 1.96
SUMO3-205ENST00000466861 PLEKHH3Q7Z736 793 aa27.32■■□□□ 1.96
SUMO3-205ENST00000466861 MOV10L1Q9BXT6 1211 aaKnown RBP27.32■■□□□ 1.96
SUMO3-205ENST00000466861 SLC38A10Q9HBR0 1119 aa27.32■■□□□ 1.96
SUMO3-205ENST00000466861 GJD2Q9UKL4 321 aa27.32■■□□□ 1.96
SUMO3-205ENST00000466861 ZNF214Q9UL59 606 aaPredicted RBP27.32■■□□□ 1.96
SUMO3-205ENST00000466861 IFIT3O14879 490 aaKnown RBP27.31■■□□□ 1.96
SUMO3-205ENST00000466861 STRNO43815 780 aa27.31■■□□□ 1.96
SUMO3-205ENST00000466861 HSPA4P34932 840 aa27.31■■□□□ 1.96
SUMO3-205ENST00000466861 PRKCZQ05513 592 aa27.31■■□□□ 1.96
SUMO3-205ENST00000466861 ZNF543Q08ER8 600 aa27.31■■□□□ 1.96
SUMO3-205ENST00000466861 CCDC96Q2M329 555 aa27.31■■□□□ 1.96
SUMO3-205ENST00000466861 GPR142Q7Z601 462 aa27.31■■□□□ 1.96
SUMO3-205ENST00000466861 RIOX2Q8IUF8 465 aa27.31■■□□□ 1.96
SUMO3-205ENST00000466861 TMTC2Q8N394 836 aa27.31■■□□□ 1.96
SUMO3-205ENST00000466861 RAET1EQ8TD07 263 aa27.31■■□□□ 1.96
SUMO3-205ENST00000466861 KIFC2Q96AC6 838 aa27.31■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms