RNA–Protein interactions for RNA: ENST00000466448.4

SRSF4-202, Transcript of serine and arginine rich splicing factor 4, humanhuman

APPRIS ALT2 TSL 3

Gene SRSF4, Length 1,264 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-202ENST00000466448 ADAMTS5Q9UNA0 930 aa22.66■■□□□ 1.22
SRSF4-202ENST00000466448 SLC4A4Q9Y6R1 1079 aa22.66■■□□□ 1.22
SRSF4-202ENST00000466448 POTEB2H3BUK9 544 aa22.65■■□□□ 1.22
SRSF4-202ENST00000466448 SLC25A27O95847 323 aa22.65■■□□□ 1.22
SRSF4-202ENST00000466448 DDRGK1Q96HY6 314 aa22.65■■□□□ 1.22
SRSF4-202ENST00000466448 KANSL2Q9H9L4 492 aa22.65■■□□□ 1.22
SRSF4-202ENST00000466448 FBXO28Q9NVF7 368 aa22.65■■□□□ 1.22
SRSF4-202ENST00000466448 PGK2P07205 417 aa22.64■■□□□ 1.21
SRSF4-202ENST00000466448 ADCYAP1R1P41586 468 aa22.64■■□□□ 1.21
SRSF4-202ENST00000466448 SNX17Q15036 470 aa22.64■■□□□ 1.21
SRSF4-202ENST00000466448 LRRC41Q15345 812 aa22.64■■□□□ 1.21
SRSF4-202ENST00000466448 TRIM60Q495X7 471 aa22.64■■□□□ 1.21
SRSF4-202ENST00000466448 FAM47AQ5JRC9 791 aa22.64■■□□□ 1.21
SRSF4-202ENST00000466448 FAM109BQ6ICB4 259 aaPredicted RBP22.64■■□□□ 1.21
SRSF4-202ENST00000466448 CTR9Q6PD62 1173 aa22.64■■□□□ 1.21
SRSF4-202ENST00000466448 PUS7LQ9H0K6 701 aaKnown RBP22.64■■□□□ 1.21
SRSF4-202ENST00000466448 PRDM5Q9NQX1 630 aaPredicted RBP22.64■■□□□ 1.21
SRSF4-202ENST00000466448 LAMA2P24043 3122 aaKnown RBP22.63■■□□□ 1.21
SRSF4-202ENST00000466448 RIOX2Q8IUF8 465 aa22.63■■□□□ 1.21
SRSF4-202ENST00000466448 FERMT2Q96AC1 680 aa22.63■■□□□ 1.21
SRSF4-202ENST00000466448 GUCD1Q96NT3 240 aa22.63■■□□□ 1.21
SRSF4-202ENST00000466448 MMP19Q99542 508 aa22.63■■□□□ 1.21
SRSF4-202ENST00000466448 VWA5AO00534 786 aa22.62■■□□□ 1.21
SRSF4-202ENST00000466448 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.62■■□□□ 1.21
SRSF4-202ENST00000466448 GOPCQ9HD26 462 aa22.62■■□□□ 1.21
SRSF4-202ENST00000466448 PPP1R9AQ9ULJ8 1098 aa22.62■■□□□ 1.21
SRSF4-202ENST00000466448 LTBP2Q14767 1821 aa22.61■■□□□ 1.21
SRSF4-202ENST00000466448 RAD21O60216 631 aa22.61■■□□□ 1.21
SRSF4-202ENST00000466448 STAT3P40763 770 aa22.61■■□□□ 1.21
SRSF4-202ENST00000466448 KCTD2Q14681 263 aa22.61■■□□□ 1.21
SRSF4-202ENST00000466448 FAM83BQ5T0W9 1011 aa22.61■■□□□ 1.21
SRSF4-202ENST00000466448 DIEXFQ68CQ4 756 aaKnown RBP22.61■■□□□ 1.21
SRSF4-202ENST00000466448 ZSCAN25Q6NSZ9 544 aa22.61■■□□□ 1.21
SRSF4-202ENST00000466448 FAM161BQ96MY7 647 aa22.61■■□□□ 1.21
SRSF4-202ENST00000466448 LRRCC1Q9C099 1032 aa22.61■■□□□ 1.21
SRSF4-202ENST00000466448 CHMP4BQ9H444 224 aaKnown RBP22.61■■□□□ 1.21
SRSF4-202ENST00000466448 XPNPEP3Q9NQH7 507 aa22.61■■□□□ 1.21
SRSF4-202ENST00000466448 PDLIM7Q9NR12 457 aa22.61■■□□□ 1.21
SRSF4-202ENST00000466448 ARPP21Q9UBL0 812 aaPredicted RBP22.61■■□□□ 1.21
SRSF4-202ENST00000466448 NRBP1Q9UHY1 535 aa22.61■■□□□ 1.21
SRSF4-202ENST00000466448 ZNF214Q9UL59 606 aaPredicted RBP22.61■■□□□ 1.21
SRSF4-202ENST00000466448 SMARCA5O60264 1052 aaPredicted RBP22.6■■□□□ 1.21
SRSF4-202ENST00000466448 SHHQ15465 462 aa22.6■■□□□ 1.21
SRSF4-202ENST00000466448 ZNF792Q3KQV3 632 aa22.6■■□□□ 1.21
SRSF4-202ENST00000466448 C9orf50Q5SZB4 431 aa22.6■■□□□ 1.21
SRSF4-202ENST00000466448 C1orf53Q5VUE5 145 aa22.6■■□□□ 1.21
SRSF4-202ENST00000466448 SH3RF1Q7Z6J0 888 aa22.6■■□□□ 1.21
SRSF4-202ENST00000466448 REPS2Q8NFH8 660 aa22.6■■□□□ 1.21
SRSF4-202ENST00000466448 BADQ92934 168 aa22.6■■□□□ 1.21
SRSF4-202ENST00000466448 TINF2Q9BSI4 451 aa22.6■■□□□ 1.21
SRSF4-202ENST00000466448 PHF24Q9UPV7 400 aa22.6■■□□□ 1.21
SRSF4-202ENST00000466448 UNC80Q8N2C7 3258 aa22.6■■□□□ 1.21
SRSF4-202ENST00000466448 BAZ2AQ9UIF9 1905 aaKnown RBP22.59■■□□□ 1.21
SRSF4-202ENST00000466448 RARBP10826 455 aa22.59■■□□□ 1.21
SRSF4-202ENST00000466448 TAL1P17542 331 aaPredicted RBP22.59■■□□□ 1.21
SRSF4-202ENST00000466448 DIS3Q9Y2L1 958 aaKnown RBP22.59■■□□□ 1.21
SRSF4-202ENST00000466448 PARP14Q460N5 1801 aa22.59■■□□□ 1.21
SRSF4-202ENST00000466448 TRIM43BA6NCK2 446 aa22.58■■□□□ 1.21
SRSF4-202ENST00000466448 TRIM43Q96BQ3 446 aaPredicted RBP22.58■■□□□ 1.21
SRSF4-202ENST00000466448 STRBPQ96SI9 672 aaKnown RBP22.58■■□□□ 1.21
SRSF4-202ENST00000466448 NUP88Q99567 741 aaPredicted RBP22.58■■□□□ 1.21
SRSF4-202ENST00000466448 MYH8P13535 1937 aa22.58■■□□□ 1.21
SRSF4-202ENST00000466448 ROBO3Q96MS0 1386 aa22.58■■□□□ 1.21
SRSF4-202ENST00000466448 PGK1P00558 417 aa22.57■■□□□ 1.2
SRSF4-202ENST00000466448 RASA1P20936 1047 aa22.57■■□□□ 1.2
SRSF4-202ENST00000466448 COPB2P35606 906 aa22.57■■□□□ 1.2
SRSF4-202ENST00000466448 TLE2Q04725 743 aa22.57■■□□□ 1.2
SRSF4-202ENST00000466448 ZNF697Q5TEC3 545 aa22.57■■□□□ 1.2
SRSF4-202ENST00000466448 CUL9Q8IWT3 2517 aa22.56■■□□□ 1.2
SRSF4-202ENST00000466448 GSG1L2A8MUP6 293 aa22.56■■□□□ 1.2
SRSF4-202ENST00000466448 ZNF865P0CJ78 1059 aaPredicted RBP22.56■■□□□ 1.2
SRSF4-202ENST00000466448 SBK1Q52WX2 424 aa22.56■■□□□ 1.2
SRSF4-202ENST00000466448 C20orf194Q5TEA3 1177 aa22.56■■□□□ 1.2
SRSF4-202ENST00000466448 RNF180Q86T96 592 aa22.56■■□□□ 1.2
SRSF4-202ENST00000466448 STK11IPQ8N1F8 1099 aa22.56■■□□□ 1.2
SRSF4-202ENST00000466448 LENG1Q96BZ8 264 aaPredicted RBP22.56■■□□□ 1.2
SRSF4-202ENST00000466448 SLF1Q9BQI6 1058 aa22.56■■□□□ 1.2
SRSF4-202ENST00000466448 ECHDC1Q9NTX5 307 aa22.56■■□□□ 1.2
SRSF4-202ENST00000466448 RCAN3Q9UKA8 241 aa22.56■■□□□ 1.2
SRSF4-202ENST00000466448 AKR1A1P14550 325 aa22.55■■□□□ 1.2
SRSF4-202ENST00000466448 ITGB8P26012 769 aa22.55■■□□□ 1.2
SRSF4-202ENST00000466448 TEX13BQ9BXU2 312 aa22.55■■□□□ 1.2
SRSF4-202ENST00000466448 CNPY2Q9Y2B0 182 aa22.55■■□□□ 1.2
SRSF4-202ENST00000466448 A0A1W2PQ45 241 aaPredicted RBP22.54■■□□□ 1.2
SRSF4-202ENST00000466448 A0A1W2PQY0 241 aa22.54■■□□□ 1.2
SRSF4-202ENST00000466448 F5H6K3 240 aa22.54■■□□□ 1.2
SRSF4-202ENST00000466448 KLRC3Q07444 240 aa22.54■■□□□ 1.2
SRSF4-202ENST00000466448 SNRNP48Q6IEG0 339 aaKnown RBP22.54■■□□□ 1.2
SRSF4-202ENST00000466448 GIMAP6Q6P9H5 292 aa22.54■■□□□ 1.2
SRSF4-202ENST00000466448 KBTBD3Q8NAB2 608 aa22.54■■□□□ 1.2
SRSF4-202ENST00000466448 OSBP2Q969R2 916 aa22.54■■□□□ 1.2
SRSF4-202ENST00000466448 MKNK2Q9HBH9 465 aa22.54■■□□□ 1.2
SRSF4-202ENST00000466448 NYAP2Q9P242 653 aa22.54■■□□□ 1.2
SRSF4-202ENST00000466448 RIPK3Q9Y572 518 aa22.54■■□□□ 1.2
SRSF4-202ENST00000466448 COL11A1P12107 1806 aaPredicted RBP22.53■■□□□ 1.2
SRSF4-202ENST00000466448 MINDY4BA8MYZ0 360 aa22.53■■□□□ 1.2
SRSF4-202ENST00000466448 ADAMTS4O75173 837 aa22.53■■□□□ 1.2
SRSF4-202ENST00000466448 NDUFB10O96000 172 aa22.53■■□□□ 1.2
SRSF4-202ENST00000466448 CLTBP09497 229 aa22.53■■□□□ 1.2
SRSF4-202ENST00000466448 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.53■■□□□ 1.22e-6■□□□□ 8.1
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms