RNA–Protein interactions for RNA: ENST00000465399.5

ATG4B-214, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-214ENST00000465399 SLC25A27O95847 323 aa17.07■□□□□ 0.32
ATG4B-214ENST00000465399 FCER1AP12319 257 aa17.07■□□□□ 0.32
ATG4B-214ENST00000465399 GJC2Q5T442 439 aaPredicted RBP17.07■□□□□ 0.32
ATG4B-214ENST00000465399 Q7L0L9 218 aa17.07■□□□□ 0.32
ATG4B-214ENST00000465399 KANSL2Q9H9L4 492 aa17.07■□□□□ 0.32
ATG4B-214ENST00000465399 EEF2P13639 858 aaKnown RBP17.06■□□□□ 0.32
ATG4B-214ENST00000465399 RTP1P59025 263 aa17.06■□□□□ 0.32
ATG4B-214ENST00000465399 MAML3Q96JK9 1138 aa17.06■□□□□ 0.32
ATG4B-214ENST00000465399 ARPP21Q9UBL0 812 aaPredicted RBP17.06■□□□□ 0.32
ATG4B-214ENST00000465399 RCAN3Q9UKA8 241 aa17.06■□□□□ 0.32
ATG4B-214ENST00000465399 SMIM22K7EJ46 135 aa17.05■□□□□ 0.32
ATG4B-214ENST00000465399 RAD21O60216 631 aa17.05■□□□□ 0.32
ATG4B-214ENST00000465399 MYCNP04198 464 aaPredicted RBP17.05■□□□□ 0.32
ATG4B-214ENST00000465399 CHGBP05060 677 aa17.05■□□□□ 0.32
ATG4B-214ENST00000465399 TMEM132BQ14DG7 1078 aa17.05■□□□□ 0.32
ATG4B-214ENST00000465399 ANO1Q5XXA6 986 aa17.05■□□□□ 0.32
ATG4B-214ENST00000465399 CTR9Q6PD62 1173 aa17.05■□□□□ 0.32
ATG4B-214ENST00000465399 MMP19Q99542 508 aa17.05■□□□□ 0.32
ATG4B-214ENST00000465399 PUS7LQ9H0K6 701 aaKnown RBP17.05■□□□□ 0.32
ATG4B-214ENST00000465399 ATP11BQ9Y2G3 1177 aa17.05■□□□□ 0.32
ATG4B-214ENST00000465399 SLC39A5Q6ZMH5 540 aa17.04■□□□□ 0.32
ATG4B-214ENST00000465399 FBXO28Q9NVF7 368 aa17.04■□□□□ 0.32
ATG4B-214ENST00000465399 MTMR10Q9NXD2 777 aa17.04■□□□□ 0.32
ATG4B-214ENST00000465399 ADAMTS5Q9UNA0 930 aa17.04■□□□□ 0.32
ATG4B-214ENST00000465399 STXBP5LQ9Y2K9 1186 aa17.04■□□□□ 0.32
ATG4B-214ENST00000465399 DLL1O00548 723 aa17.03■□□□□ 0.32
ATG4B-214ENST00000465399 SMARCA5O60264 1052 aaPredicted RBP17.03■□□□□ 0.32
ATG4B-214ENST00000465399 COPB2P35606 906 aa17.03■□□□□ 0.32
ATG4B-214ENST00000465399 KCTD2Q14681 263 aa17.03■□□□□ 0.32
ATG4B-214ENST00000465399 PRAMEF19Q5SWL8 479 aa17.03■□□□□ 0.32
ATG4B-214ENST00000465399 RIOX2Q8IUF8 465 aa17.03■□□□□ 0.32
ATG4B-214ENST00000465399 GPATCH3Q96I76 525 aa17.03■□□□□ 0.32
ATG4B-214ENST00000465399 PRDM5Q9NQX1 630 aaPredicted RBP17.03■□□□□ 0.32
ATG4B-214ENST00000465399 ECHDC1Q9NTX5 307 aa17.03■□□□□ 0.32
ATG4B-214ENST00000465399 NRBP1Q9UHY1 535 aa17.03■□□□□ 0.32
ATG4B-214ENST00000465399 PPP1R9AQ9ULJ8 1098 aa17.03■□□□□ 0.32
ATG4B-214ENST00000465399 VWA5AO00534 786 aa17.02■□□□□ 0.32
ATG4B-214ENST00000465399 RARBP10826 455 aa17.02■□□□□ 0.32
ATG4B-214ENST00000465399 STAT3P40763 770 aa17.02■□□□□ 0.32
ATG4B-214ENST00000465399 SNX17Q15036 470 aa17.02■□□□□ 0.32
ATG4B-214ENST00000465399 LRRC41Q15345 812 aa17.02■□□□□ 0.32
ATG4B-214ENST00000465399 FAM83BQ5T0W9 1011 aa17.02■□□□□ 0.32
ATG4B-214ENST00000465399 MKNK2Q9HBH9 465 aa17.02■□□□□ 0.32
ATG4B-214ENST00000465399 PGK2P07205 417 aa17.01■□□□□ 0.31
ATG4B-214ENST00000465399 ADCYAP1R1P41586 468 aa17.01■□□□□ 0.31
ATG4B-214ENST00000465399 TRIM60Q495X7 471 aa17.01■□□□□ 0.31
ATG4B-214ENST00000465399 SBK1Q52WX2 424 aa17.01■□□□□ 0.31
ATG4B-214ENST00000465399 FAM47AQ5JRC9 791 aa17.01■□□□□ 0.31
ATG4B-214ENST00000465399 STRBPQ96SI9 672 aaKnown RBP17.01■□□□□ 0.31
ATG4B-214ENST00000465399 TINF2Q9BSI4 451 aa17.01■□□□□ 0.31
ATG4B-214ENST00000465399 XPNPEP3Q9NQH7 507 aa17.01■□□□□ 0.31
ATG4B-214ENST00000465399 ZNF214Q9UL59 606 aaPredicted RBP17.01■□□□□ 0.31
ATG4B-214ENST00000465399 DIS3Q9Y2L1 958 aaKnown RBP17.01■□□□□ 0.31
ATG4B-214ENST00000465399 ROBO3Q96MS0 1386 aa17.01■□□□□ 0.31
ATG4B-214ENST00000465399 C1orf53Q5VUE5 145 aa17■□□□□ 0.31
ATG4B-214ENST00000465399 GIMAP6Q6P9H5 292 aa17■□□□□ 0.31
ATG4B-214ENST00000465399 RNF180Q86T96 592 aa17■□□□□ 0.31
ATG4B-214ENST00000465399 KBTBD3Q8NAB2 608 aa17■□□□□ 0.31
ATG4B-214ENST00000465399 FERMT2Q96AC1 680 aa17■□□□□ 0.31
ATG4B-214ENST00000465399 SLF1Q9BQI6 1058 aa17■□□□□ 0.31
ATG4B-214ENST00000465399 MCM3APO60318 1980 aa16.99■□□□□ 0.31
ATG4B-214ENST00000465399 MINDY4BA8MYZ0 360 aa16.99■□□□□ 0.31
ATG4B-214ENST00000465399 C20orf194Q5TEA3 1177 aa16.99■□□□□ 0.31
ATG4B-214ENST00000465399 FAM109BQ6ICB4 259 aaPredicted RBP16.99■□□□□ 0.31
ATG4B-214ENST00000465399 STK11IPQ8N1F8 1099 aa16.99■□□□□ 0.31
ATG4B-214ENST00000465399 REPS2Q8NFH8 660 aa16.99■□□□□ 0.31
ATG4B-214ENST00000465399 APPBP2Q92624 585 aa16.99■□□□□ 0.31
ATG4B-214ENST00000465399 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.99■□□□□ 0.31
ATG4B-214ENST00000465399 TEX13BQ9BXU2 312 aa16.99■□□□□ 0.31
ATG4B-214ENST00000465399 PHF24Q9UPV7 400 aa16.99■□□□□ 0.31
ATG4B-214ENST00000465399 GSG1L2A8MUP6 293 aa16.98■□□□□ 0.31
ATG4B-214ENST00000465399 ZFYP08048 801 aaPredicted RBP16.98■□□□□ 0.31
ATG4B-214ENST00000465399 AKR1A1P14550 325 aa16.98■□□□□ 0.31
ATG4B-214ENST00000465399 GNAT2P19087 354 aa16.98■□□□□ 0.31
ATG4B-214ENST00000465399 RASA1P20936 1047 aa16.98■□□□□ 0.31
ATG4B-214ENST00000465399 TDO2P48775 406 aa16.98■□□□□ 0.31
ATG4B-214ENST00000465399 ZNF792Q3KQV3 632 aa16.98■□□□□ 0.31
ATG4B-214ENST00000465399 SNRNP48Q6IEG0 339 aaKnown RBP16.98■□□□□ 0.31
ATG4B-214ENST00000465399 NUP88Q99567 741 aaPredicted RBP16.98■□□□□ 0.31
ATG4B-214ENST00000465399 ZNF287Q9HBT7 754 aa16.98■□□□□ 0.31
ATG4B-214ENST00000465399 PDLIM7Q9NR12 457 aa16.98■□□□□ 0.31
ATG4B-214ENST00000465399 NYAP2Q9P242 653 aa16.98■□□□□ 0.31
ATG4B-214ENST00000465399 CNPY2Q9Y2B0 182 aa16.98■□□□□ 0.31
ATG4B-214ENST00000465399 F5H6K3 240 aa16.97■□□□□ 0.31
ATG4B-214ENST00000465399 POTEB2H3BUK9 544 aa16.97■□□□□ 0.31
ATG4B-214ENST00000465399 RNF113AO15541 343 aaKnown RBP16.97■□□□□ 0.31
ATG4B-214ENST00000465399 KLRC3Q07444 240 aa16.97■□□□□ 0.31
ATG4B-214ENST00000465399 LRRFIP1Q32MZ4 808 aaKnown RBP16.97■□□□□ 0.31
ATG4B-214ENST00000465399 ZNF697Q5TEC3 545 aa16.97■□□□□ 0.31
ATG4B-214ENST00000465399 MSL3Q8N5Y2 521 aaKnown RBP16.97■□□□□ 0.31
ATG4B-214ENST00000465399 PRPF38AQ8NAV1 312 aaKnown RBP16.97■□□□□ 0.31
ATG4B-214ENST00000465399 BADQ92934 168 aa16.97■□□□□ 0.31
ATG4B-214ENST00000465399 OSBP2Q969R2 916 aa16.97■□□□□ 0.31
ATG4B-214ENST00000465399 CTDP1Q9Y5B0 961 aaPredicted RBP16.97■□□□□ 0.31
ATG4B-214ENST00000465399 LAMA2P24043 3122 aaKnown RBP16.96■□□□□ 0.31
ATG4B-214ENST00000465399 GPAA1O43292 621 aa16.96■□□□□ 0.31
ATG4B-214ENST00000465399 NDUFB10O96000 172 aa16.96■□□□□ 0.31
ATG4B-214ENST00000465399 PGK1P00558 417 aa16.96■□□□□ 0.31
ATG4B-214ENST00000465399 APPP05067 770 aa16.96■□□□□ 0.31
ATG4B-214ENST00000465399 ZNF444Q8N0Y2 327 aaPredicted RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms