RNA–Protein interactions for RNA: ENST00000464053.1

GYPC-205, Transcript of glycophorin C (Gerbich blood group), humanhuman

TSL 1 (best)

Gene GYPC, Length 1,805 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-205ENST00000464053 WDR90Q96KV7 1748 aa17.86■□□□□ 0.45
GYPC-205ENST00000464053 ASNSP08243 561 aa17.86■□□□□ 0.45
GYPC-205ENST00000464053 PFKFB3Q16875 520 aaPredicted RBP17.86■□□□□ 0.45
GYPC-205ENST00000464053 DCAF15Q66K64 600 aa17.86■□□□□ 0.45
GYPC-205ENST00000464053 RGS22Q8NE09 1264 aa17.86■□□□□ 0.45
GYPC-205ENST00000464053 GMCL1P1Q8NEA9 526 aa17.86■□□□□ 0.45
GYPC-205ENST00000464053 ZNF341Q9BYN7 854 aa17.86■□□□□ 0.45
GYPC-205ENST00000464053 ZSCAN16Q9H4T2 348 aaPredicted RBP17.86■□□□□ 0.45
GYPC-205ENST00000464053 GDPD2Q9HCC8 539 aa17.86■□□□□ 0.45
GYPC-205ENST00000464053 VAT1LQ9HCJ6 419 aa17.86■□□□□ 0.45
GYPC-205ENST00000464053 CTNND1O60716 968 aaKnown RBP17.85■□□□□ 0.45
GYPC-205ENST00000464053 SCG2P13521 617 aa17.85■□□□□ 0.45
GYPC-205ENST00000464053 KIF23Q02241 960 aaPredicted RBP17.85■□□□□ 0.45
GYPC-205ENST00000464053 TRIM29Q14134 588 aa17.85■□□□□ 0.45
GYPC-205ENST00000464053 CCDC96Q2M329 555 aa17.85■□□□□ 0.45
GYPC-205ENST00000464053 KIAA1755Q5JYT7 1200 aa17.85■□□□□ 0.45
GYPC-205ENST00000464053 NUP88Q99567 741 aaPredicted RBP17.85■□□□□ 0.45
GYPC-205ENST00000464053 ARHGEF10LQ9HCE6 1279 aa17.85■□□□□ 0.45
GYPC-205ENST00000464053 ZNF112Q9UJU3 913 aa17.85■□□□□ 0.45
GYPC-205ENST00000464053 TMX2Q9Y320 296 aa17.85■□□□□ 0.45
GYPC-205ENST00000464053 NDUFB10O96000 172 aa17.84■□□□□ 0.45
GYPC-205ENST00000464053 SLC16A2P36021 539 aa17.84■□□□□ 0.45
GYPC-205ENST00000464053 SLC1A4P43007 532 aa17.84■□□□□ 0.45
GYPC-205ENST00000464053 EAPPQ56P03 285 aaPredicted RBP17.84■□□□□ 0.45
GYPC-205ENST00000464053 SULF1Q8IWU6 871 aa17.84■□□□□ 0.45
GYPC-205ENST00000464053 DCAF4Q8WV16 495 aa17.84■□□□□ 0.45
GYPC-205ENST00000464053 ZKSCAN4Q969J2 545 aaPredicted RBP17.84■□□□□ 0.45
GYPC-205ENST00000464053 HOOK2Q96ED9 719 aa17.84■□□□□ 0.45
GYPC-205ENST00000464053 RIOX1Q9H6W3 641 aa17.84■□□□□ 0.45
GYPC-205ENST00000464053 DOCK1Q14185 1865 aa17.84■□□□□ 0.45
GYPC-205ENST00000464053 IQCA1LA6NCM1 817 aa17.84■□□□□ 0.45
GYPC-205ENST00000464053 DDX11L8A8MPP1 907 aa17.84■□□□□ 0.45
GYPC-205ENST00000464053 MMP1P03956 469 aa17.84■□□□□ 0.45
GYPC-205ENST00000464053 SMARCA1P28370 1054 aa17.84■□□□□ 0.45
GYPC-205ENST00000464053 GPATCH4Q5T3I0 446 aaKnown RBP17.84■□□□□ 0.45
GYPC-205ENST00000464053 KRT26Q7Z3Y9 468 aa17.84■□□□□ 0.45
GYPC-205ENST00000464053 SPICE1Q8N0Z3 855 aa17.84■□□□□ 0.45
GYPC-205ENST00000464053 GPKOWQ92917 476 aaPredicted RBP eCLIP17.84■□□□□ 0.45
GYPC-205ENST00000464053 PIGSQ96S52 555 aa17.84■□□□□ 0.45
GYPC-205ENST00000464053 NCLP19338 710 aaKnown RBP17.83■□□□□ 0.44
GYPC-205ENST00000464053 PRKG1Q13976 671 aa17.83■□□□□ 0.44
GYPC-205ENST00000464053 SUPT20HL1Q3ZLR7 823 aa17.83■□□□□ 0.44
GYPC-205ENST00000464053 ZC3H15Q8WU90 426 aaKnown RBP17.83■□□□□ 0.44
GYPC-205ENST00000464053 KLRG1Q96E93 195 aa17.83■□□□□ 0.44
GYPC-205ENST00000464053 WRNIP1Q96S55 665 aa17.83■□□□□ 0.44
GYPC-205ENST00000464053 LMBRD1Q9NUN5 540 aa17.83■□□□□ 0.44
GYPC-205ENST00000464053 RBM27Q9P2N5 1060 aaKnown RBP17.83■□□□□ 0.44
GYPC-205ENST00000464053 TFIP11Q9UBB9 837 aaKnown RBP17.83■□□□□ 0.44
GYPC-205ENST00000464053 SYNPO2Q9UMS6 1093 aa17.83■□□□□ 0.44
GYPC-205ENST00000464053 PRPF40AO75400 957 aaKnown RBP17.82■□□□□ 0.44
GYPC-205ENST00000464053 ZYXQ15942 572 aaKnown RBP17.82■□□□□ 0.44
GYPC-205ENST00000464053 USP48Q86UV5 1035 aa17.82■□□□□ 0.44
GYPC-205ENST00000464053 HOMER1Q86YM7 354 aa17.82■□□□□ 0.44
GYPC-205ENST00000464053 ADGRF4Q8IZF3 695 aa17.82■□□□□ 0.44
GYPC-205ENST00000464053 GMCL1Q96IK5 515 aa17.82■□□□□ 0.44
GYPC-205ENST00000464053 PHF20Q9BVI0 1012 aa17.82■□□□□ 0.44
GYPC-205ENST00000464053 ISY1Q9ULR0 285 aaKnown RBP17.82■□□□□ 0.44
GYPC-205ENST00000464053 BTBD18B2RXH4 712 aa17.82■□□□□ 0.44
GYPC-205ENST00000464053 GOLGA6L22H0YM25 854 aa17.82■□□□□ 0.44
GYPC-205ENST00000464053 FIBPO43427 364 aa17.82■□□□□ 0.44
GYPC-205ENST00000464053 USP2O75604 605 aaPredicted RBP17.82■□□□□ 0.44
GYPC-205ENST00000464053 POTEIP0CG38 1075 aa17.82■□□□□ 0.44
GYPC-205ENST00000464053 POTEJP0CG39 1038 aa17.82■□□□□ 0.44
GYPC-205ENST00000464053 WWC2Q6AWC2 1192 aa17.82■□□□□ 0.44
GYPC-205ENST00000464053 TYW1BQ6NUM6 668 aa17.82■□□□□ 0.44
GYPC-205ENST00000464053 DIS3L2Q8IYB7 885 aaKnown RBP17.82■□□□□ 0.44
GYPC-205ENST00000464053 OXER1Q8TDS5 423 aa17.82■□□□□ 0.44
GYPC-205ENST00000464053 RRP36Q96EU6 259 aaKnown RBP17.82■□□□□ 0.44
GYPC-205ENST00000464053 JMJD4Q9H9V9 463 aa17.82■□□□□ 0.44
GYPC-205ENST00000464053 XBP1P17861 261 aa17.81■□□□□ 0.44
GYPC-205ENST00000464053 U2AF2P26368 475 aaKnown RBP eCLIP17.81■□□□□ 0.44
GYPC-205ENST00000464053 NPY5RQ15761 445 aa17.81■□□□□ 0.44
GYPC-205ENST00000464053 SCYL3Q8IZE3 742 aa17.81■□□□□ 0.44
GYPC-205ENST00000464053 GINM1Q9NU53 330 aa17.81■□□□□ 0.44
GYPC-205ENST00000464053 USP17L10C9JJH3 530 aa17.8■□□□□ 0.44
GYPC-205ENST00000464053 ADAMTS3O15072 1205 aa17.8■□□□□ 0.44
GYPC-205ENST00000464053 BMP3P12645 472 aa17.8■□□□□ 0.44
GYPC-205ENST00000464053 KRT85P78386 507 aa17.8■□□□□ 0.44
GYPC-205ENST00000464053 NR5A1Q13285 461 aa17.8■□□□□ 0.44
GYPC-205ENST00000464053 HEATR3Q7Z4Q2 680 aa17.8■□□□□ 0.44
GYPC-205ENST00000464053 FTOQ9C0B1 505 aaKnown RBP eCLIP17.8■□□□□ 0.44
GYPC-205ENST00000464053 VCPKMTQ9H867 229 aa17.8■□□□□ 0.44
GYPC-205ENST00000464053 GOPCQ9HD26 462 aa17.8■□□□□ 0.44
GYPC-205ENST00000464053 TMEM232C9JQI7 657 aa17.79■□□□□ 0.44
GYPC-205ENST00000464053 STXBP3O00186 592 aa17.79■□□□□ 0.44
GYPC-205ENST00000464053 SAFBQ15424 915 aaKnown RBP eCLIP17.79■□□□□ 0.44
GYPC-205ENST00000464053 BRAPQ7Z569 592 aa17.79■□□□□ 0.44
GYPC-205ENST00000464053 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.79■□□□□ 0.44
GYPC-205ENST00000464053 CDCA5Q96FF9 252 aa17.79■□□□□ 0.44
GYPC-205ENST00000464053 BARHL2Q9NY43 387 aa17.79■□□□□ 0.44
GYPC-205ENST00000464053 PHIPQ8WWQ0 1821 aa17.79■□□□□ 0.44
GYPC-205ENST00000464053 PTPRAP18433 802 aa17.79■□□□□ 0.44
GYPC-205ENST00000464053 DGKZQ13574 1117 aa17.79■□□□□ 0.44
GYPC-205ENST00000464053 GNL2Q13823 731 aaKnown RBP17.79■□□□□ 0.44
GYPC-205ENST00000464053 FAM83BQ5T0W9 1011 aa17.79■□□□□ 0.44
GYPC-205ENST00000464053 MYSM1Q5VVJ2 828 aa17.79■□□□□ 0.44
GYPC-205ENST00000464053 PNMA8AQ86V59 439 aaPredicted RBP17.79■□□□□ 0.44
GYPC-205ENST00000464053 MTMR8Q96EF0 704 aa17.79■□□□□ 0.44
GYPC-205ENST00000464053 USP28Q96RU2 1077 aa17.79■□□□□ 0.44
GYPC-205ENST00000464053 FEZ1Q99689 392 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 133.8 ms