RNA–Protein interactions for RNA: ENST00000462715.1

TRAPPC3-205, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 2,428 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-205ENST00000462715 PDRG1Q9NUG6 133 aa13.03□□□□□ -0.32
TRAPPC3-205ENST00000462715 MROH7-TTC4A0A0A0MT08 1334 aa13.03□□□□□ -0.32
TRAPPC3-205ENST00000462715 NR1I2O75469 434 aa13.02□□□□□ -0.32
TRAPPC3-205ENST00000462715 TOMM70O94826 608 aa13.02□□□□□ -0.32
TRAPPC3-205ENST00000462715 PPP2R3AQ06190 1150 aa13.02□□□□□ -0.32
TRAPPC3-205ENST00000462715 ANKRD1Q15327 319 aa13.02□□□□□ -0.32
TRAPPC3-205ENST00000462715 HSP90B2PQ58FF3 399 aa13.02□□□□□ -0.32
TRAPPC3-205ENST00000462715 ARMCX5Q6P1M9 558 aa13.02□□□□□ -0.32
TRAPPC3-205ENST00000462715 KBTBD3Q8NAB2 608 aa13.02□□□□□ -0.32
TRAPPC3-205ENST00000462715 DAGLAQ9Y4D2 1042 aa13.02□□□□□ -0.32
TRAPPC3-205ENST00000462715 GAKO14976 1311 aa13.02□□□□□ -0.32
TRAPPC3-205ENST00000462715 ADAMTSL1Q8N6G6 1762 aa13.02□□□□□ -0.33
TRAPPC3-205ENST00000462715 MAP4K4O95819 1239 aaPredicted RBP13.02□□□□□ -0.33
TRAPPC3-205ENST00000462715 E2F4Q16254 413 aa13.02□□□□□ -0.33
TRAPPC3-205ENST00000462715 NBPF9Q3BBW0 867 aa13.02□□□□□ -0.33
TRAPPC3-205ENST00000462715 BEND6Q5SZJ8 279 aaPredicted RBP13.02□□□□□ -0.33
TRAPPC3-205ENST00000462715 SLC9C2Q5TAH2 1124 aa13.02□□□□□ -0.33
TRAPPC3-205ENST00000462715 MICALL1Q8N3F8 863 aa13.02□□□□□ -0.33
TRAPPC3-205ENST00000462715 MAGEB6Q8N7X4 407 aa13.02□□□□□ -0.33
TRAPPC3-205ENST00000462715 BICD2Q8TD16 824 aa13.02□□□□□ -0.33
TRAPPC3-205ENST00000462715 DCPSQ96C86 337 aaKnown RBP13.02□□□□□ -0.33
TRAPPC3-205ENST00000462715 EVI5LQ96CN4 794 aa13.02□□□□□ -0.33
TRAPPC3-205ENST00000462715 PRMT6Q96LA8 375 aaPredicted RBP13.02□□□□□ -0.33
TRAPPC3-205ENST00000462715 MYH2Q9UKX2 1941 aa13.01□□□□□ -0.33
TRAPPC3-205ENST00000462715 HNRNPH1P31943 449 aaKnown RBP13.01□□□□□ -0.33
TRAPPC3-205ENST00000462715 IRX1P78414 480 aaPredicted RBP13.01□□□□□ -0.33
TRAPPC3-205ENST00000462715 CHADLQ6NUI6 762 aa13.01□□□□□ -0.33
TRAPPC3-205ENST00000462715 CCDC83Q8IWF9 413 aa13.01□□□□□ -0.33
TRAPPC3-205ENST00000462715 CNTROBQ8N137 903 aa13.01□□□□□ -0.33
TRAPPC3-205ENST00000462715 CTCFLQ8NI51 663 aaPredicted RBP13.01□□□□□ -0.33
TRAPPC3-205ENST00000462715 RBM46Q8TBY0 533 aaKnown RBP13.01□□□□□ -0.33
TRAPPC3-205ENST00000462715 GGA3Q9NZ52 723 aa13.01□□□□□ -0.33
TRAPPC3-205ENST00000462715 TMOD2Q9NZR1 351 aa13.01□□□□□ -0.33
TRAPPC3-205ENST00000462715 PGAP2Q9UHJ9 254 aa13.01□□□□□ -0.33
TRAPPC3-205ENST00000462715 CYP46A1Q9Y6A2 500 aa13.01□□□□□ -0.33
TRAPPC3-205ENST00000462715 PITPNM2Q9BZ72 1349 aa13.01□□□□□ -0.33
TRAPPC3-205ENST00000462715 BAG3O95817 575 aa13.01□□□□□ -0.33
TRAPPC3-205ENST00000462715 POTEIP0CG38 1075 aa13.01□□□□□ -0.33
TRAPPC3-205ENST00000462715 POTEJP0CG39 1038 aa13.01□□□□□ -0.33
TRAPPC3-205ENST00000462715 PDE6AP16499 860 aa13.01□□□□□ -0.33
TRAPPC3-205ENST00000462715 CYP7A1P22680 504 aa13.01□□□□□ -0.33
TRAPPC3-205ENST00000462715 MNAT1P51948 309 aa13.01□□□□□ -0.33
TRAPPC3-205ENST00000462715 ANGEL2Q5VTE6 544 aaKnown RBP13.01□□□□□ -0.33
TRAPPC3-205ENST00000462715 APOBEC3HQ6NTF7 200 aaKnown RBP13.01□□□□□ -0.33
TRAPPC3-205ENST00000462715 C11orf57Q6ZUT1 292 aaPredicted RBP13.01□□□□□ -0.33
TRAPPC3-205ENST00000462715 APOBEC3FQ8IUX4 373 aaKnown RBP13.01□□□□□ -0.33
TRAPPC3-205ENST00000462715 SMC1BQ8NDV3 1235 aa13.01□□□□□ -0.33
TRAPPC3-205ENST00000462715 ZNF384Q8TF68 577 aa13.01□□□□□ -0.33
TRAPPC3-205ENST00000462715 FSD1Q9BTV5 496 aa13.01□□□□□ -0.33
TRAPPC3-205ENST00000462715 L1RE1Q9UN81 338 aa13.01□□□□□ -0.33
TRAPPC3-205ENST00000462715 MYO5AQ9Y4I1 1855 aaKnown RBP13□□□□□ -0.33
TRAPPC3-205ENST00000462715 ECM29Q5VYK3 1845 aa13□□□□□ -0.33
TRAPPC3-205ENST00000462715 ZFYP08048 801 aaPredicted RBP13□□□□□ -0.33
TRAPPC3-205ENST00000462715 NEDD9Q14511 834 aa13□□□□□ -0.33
TRAPPC3-205ENST00000462715 TICAM2Q86XR7 235 aa13□□□□□ -0.33
TRAPPC3-205ENST00000462715 SPATS2Q86XZ4 545 aaKnown RBP13□□□□□ -0.33
TRAPPC3-205ENST00000462715 FMNL3Q8IVF7 1028 aa13□□□□□ -0.33
TRAPPC3-205ENST00000462715 CEP112Q8N8E3 955 aa13□□□□□ -0.33
TRAPPC3-205ENST00000462715 RILPL2Q969X0 211 aa13□□□□□ -0.33
TRAPPC3-205ENST00000462715 PCDHAC2Q9Y5I4 1007 aa13□□□□□ -0.33
TRAPPC3-205ENST00000462715 GPR75-ASB3A0A0A6YYF3 556 aa13□□□□□ -0.33
TRAPPC3-205ENST00000462715 A6NNZ2 444 aa13□□□□□ -0.33
TRAPPC3-205ENST00000462715 CBFA2T2O43439 604 aa13□□□□□ -0.33
TRAPPC3-205ENST00000462715 PLCG2P16885 1265 aa13□□□□□ -0.33
TRAPPC3-205ENST00000462715 BTDP43251 543 aa13□□□□□ -0.33
TRAPPC3-205ENST00000462715 AARSP49588 968 aaKnown RBP eCLIP13□□□□□ -0.33
TRAPPC3-205ENST00000462715 TUBB8Q3ZCM7 444 aa13□□□□□ -0.33
TRAPPC3-205ENST00000462715 SPDYE2Q495Y8 402 aa13□□□□□ -0.33
TRAPPC3-205ENST00000462715 EP400NLQ6ZTU2 488 aa13□□□□□ -0.33
TRAPPC3-205ENST00000462715 SULF1Q8IWU6 871 aa13□□□□□ -0.33
TRAPPC3-205ENST00000462715 GIMAP7Q8NHV1 300 aa13□□□□□ -0.33
TRAPPC3-205ENST00000462715 RUFY2Q8WXA3 655 aa13□□□□□ -0.33
TRAPPC3-205ENST00000462715 PGBD1Q96JS3 809 aa13□□□□□ -0.33
TRAPPC3-205ENST00000462715 TDRD3Q9H7E2 651 aaKnown RBP13□□□□□ -0.33
TRAPPC3-205ENST00000462715 PDE11AQ9HCR9 933 aa13□□□□□ -0.33
TRAPPC3-205ENST00000462715 ZNF532Q9HCE3 1301 aa12.99□□□□□ -0.33
TRAPPC3-205ENST00000462715 ARHGAP6O43182 974 aa12.99□□□□□ -0.33
TRAPPC3-205ENST00000462715 ADD2P35612 726 aa12.99□□□□□ -0.33
TRAPPC3-205ENST00000462715 TNFAIP1Q13829 316 aa12.99□□□□□ -0.33
TRAPPC3-205ENST00000462715 UBE3CQ15386 1083 aa12.99□□□□□ -0.33
TRAPPC3-205ENST00000462715 HOMEZQ8IX15 550 aa12.99□□□□□ -0.33
TRAPPC3-205ENST00000462715 VEZTQ9HBM0 779 aa12.99□□□□□ -0.33
TRAPPC3-205ENST00000462715 ZNF70Q9UC06 446 aaPredicted RBP12.99□□□□□ -0.33
TRAPPC3-205ENST00000462715 MYH7P12883 1935 aa12.99□□□□□ -0.33
TRAPPC3-205ENST00000462715 CLRN2A0PK11 232 aa12.99□□□□□ -0.33
TRAPPC3-205ENST00000462715 KLHL33A6NCF5 533 aa12.99□□□□□ -0.33
TRAPPC3-205ENST00000462715 SHOX2O60902 331 aaPredicted RBP12.99□□□□□ -0.33
TRAPPC3-205ENST00000462715 FSTL1Q12841 308 aa12.99□□□□□ -0.33
TRAPPC3-205ENST00000462715 GBP6Q6ZN66 633 aa12.99□□□□□ -0.33
TRAPPC3-205ENST00000462715 CDC37L1Q7L3B6 337 aa12.99□□□□□ -0.33
TRAPPC3-205ENST00000462715 USP40Q9NVE5 1235 aa12.99□□□□□ -0.33
TRAPPC3-205ENST00000462715 RFX7Q2KHR2 1363 aa12.98□□□□□ -0.33
TRAPPC3-205ENST00000462715 MYH15Q9Y2K3 1946 aa12.98□□□□□ -0.33
TRAPPC3-205ENST00000462715 ASTN2O75129 1339 aaPredicted RBP12.98□□□□□ -0.33
TRAPPC3-205ENST00000462715 RNF113AO15541 343 aaKnown RBP12.98□□□□□ -0.33
TRAPPC3-205ENST00000462715 SSR1P43307 286 aaKnown RBP12.98□□□□□ -0.33
TRAPPC3-205ENST00000462715 TNNI2P48788 182 aa12.98□□□□□ -0.33
TRAPPC3-205ENST00000462715 FKBP1CQ5VVH2 108 aa12.98□□□□□ -0.33
TRAPPC3-205ENST00000462715 MAP1SQ66K74 1059 aaPredicted RBP12.98□□□□□ -0.33
TRAPPC3-205ENST00000462715 KRT26Q7Z3Y9 468 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms