RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 UFL1O94874 794 aa10.86□□□□□ -0.67
UFD1-205ENST00000459854 TCERG1LQ5VWI1 586 aa10.86□□□□□ -0.67
UFD1-205ENST00000459854 ALG1Q9BT22 464 aa10.86□□□□□ -0.67
UFD1-205ENST00000459854 CUL5Q93034 780 aa10.85□□□□□ -0.67
UFD1-205ENST00000459854 NOX5Q96PH1 765 aa10.85□□□□□ -0.67
UFD1-205ENST00000459854 LMBRD1Q9NUN5 540 aa10.85□□□□□ -0.67
UFD1-205ENST00000459854 RIPOR2Q9Y4F9 1068 aa10.85□□□□□ -0.67
UFD1-205ENST00000459854 PXDNLA1KZ92 1463 aa10.85□□□□□ -0.67
UFD1-205ENST00000459854 CFAP221Q4G0U5 840 aa10.85□□□□□ -0.67
UFD1-205ENST00000459854 RHPN1Q8TCX5 695 aa10.85□□□□□ -0.67
UFD1-205ENST00000459854 TRIM75PA6NK02 468 aa10.85□□□□□ -0.67
UFD1-205ENST00000459854 PPFIA2O75334 1257 aa10.85□□□□□ -0.67
UFD1-205ENST00000459854 ATP2B4P23634 1241 aa10.85□□□□□ -0.67
UFD1-205ENST00000459854 MAGEA9P43362 315 aa10.85□□□□□ -0.67
UFD1-205ENST00000459854 CCDC93Q567U6 631 aa10.85□□□□□ -0.67
UFD1-205ENST00000459854 CFAP157Q5JU67 520 aa10.85□□□□□ -0.67
UFD1-205ENST00000459854 MMS22LQ6ZRQ5 1243 aa10.85□□□□□ -0.67
UFD1-205ENST00000459854 HOMEZQ8IX15 550 aa10.85□□□□□ -0.67
UFD1-205ENST00000459854 SLF2Q8IX21 1173 aa10.85□□□□□ -0.67
UFD1-205ENST00000459854 BRF1Q92994 677 aa10.85□□□□□ -0.67
UFD1-205ENST00000459854 SECISBP2LQ93073 1101 aaKnown RBP10.85□□□□□ -0.67
UFD1-205ENST00000459854 DCTPP1Q9H773 170 aa10.85□□□□□ -0.67
UFD1-205ENST00000459854 HOMER3Q9NSC5 361 aa10.85□□□□□ -0.67
UFD1-205ENST00000459854 CALM1P0DP23 149 aa10.85□□□□□ -0.67
UFD1-205ENST00000459854 CALM2P0DP24 149 aa10.85□□□□□ -0.67
UFD1-205ENST00000459854 CALM3P0DP25 149 aa10.85□□□□□ -0.67
UFD1-205ENST00000459854 GNGT1P63211 74 aa10.85□□□□□ -0.67
UFD1-205ENST00000459854 FANCCQ00597 558 aa10.85□□□□□ -0.67
UFD1-205ENST00000459854 PROM2Q8N271 834 aa10.85□□□□□ -0.67
UFD1-205ENST00000459854 IGSF22Q8N9C0 903 aa10.85□□□□□ -0.67
UFD1-205ENST00000459854 GREM2Q9H772 168 aa10.85□□□□□ -0.67
UFD1-205ENST00000459854 CBX8Q9HC52 389 aa10.85□□□□□ -0.67
UFD1-205ENST00000459854 PCDHB15Q9Y5E8 787 aa10.85□□□□□ -0.67
UFD1-205ENST00000459854 TLDC2A0PJX2 215 aa10.84□□□□□ -0.67
UFD1-205ENST00000459854 E7EVH7 732 aa10.84□□□□□ -0.67
UFD1-205ENST00000459854 FLOT1O75955 427 aa10.84□□□□□ -0.67
UFD1-205ENST00000459854 CALML3P27482 149 aa10.84□□□□□ -0.67
UFD1-205ENST00000459854 NLRP12P59046 1061 aa10.84□□□□□ -0.67
UFD1-205ENST00000459854 RNASELQ05823 741 aaKnown RBP10.84□□□□□ -0.67
UFD1-205ENST00000459854 PUM3Q15397 648 aaKnown RBP10.84□□□□□ -0.67
UFD1-205ENST00000459854 RTKN2Q8IZC4 609 aa10.84□□□□□ -0.67
UFD1-205ENST00000459854 VPS52Q8N1B4 723 aa10.84□□□□□ -0.67
UFD1-205ENST00000459854 KRI1Q8N9T8 703 aaKnown RBP10.84□□□□□ -0.67
UFD1-205ENST00000459854 IQUBQ8NA54 791 aa10.84□□□□□ -0.67
UFD1-205ENST00000459854 PFDN1O60925 122 aa10.84□□□□□ -0.67
UFD1-205ENST00000459854 TBCAO75347 108 aaKnown RBP10.84□□□□□ -0.67
UFD1-205ENST00000459854 NTSR2O95665 410 aa10.84□□□□□ -0.67
UFD1-205ENST00000459854 HPDP32754 393 aaPredicted RBP10.84□□□□□ -0.67
UFD1-205ENST00000459854 PPP1R7Q15435 360 aa10.84□□□□□ -0.67
UFD1-205ENST00000459854 SYCE1Q8N0S2 351 aa10.84□□□□□ -0.67
UFD1-205ENST00000459854 MAIP1Q8WWC4 291 aa10.84□□□□□ -0.67
UFD1-205ENST00000459854 ARHGEF2Q92974 986 aaKnown RBP10.84□□□□□ -0.67
UFD1-205ENST00000459854 ODF2LQ9ULJ1 636 aa10.84□□□□□ -0.67
UFD1-205ENST00000459854 PA2G4Q9UQ80 394 aaKnown RBP10.84□□□□□ -0.67
UFD1-205ENST00000459854 RBM8AQ9Y5S9 174 aaKnown RBP10.84□□□□□ -0.67
UFD1-205ENST00000459854 ZBTB43O43298 467 aa10.84□□□□□ -0.67
UFD1-205ENST00000459854 TGFB2P61812 414 aa10.84□□□□□ -0.67
UFD1-205ENST00000459854 SPTY2D1Q68D10 685 aaPredicted RBP10.84□□□□□ -0.67
UFD1-205ENST00000459854 SKAP1Q86WV1 359 aa10.84□□□□□ -0.67
UFD1-205ENST00000459854 RASEFQ8IZ41 740 aa10.84□□□□□ -0.67
UFD1-205ENST00000459854 ZGPATQ8N5A5 531 aaKnown RBP10.84□□□□□ -0.67
UFD1-205ENST00000459854 BICD1Q96G01 975 aa10.84□□□□□ -0.67
UFD1-205ENST00000459854 PLA2G12BQ9BX93 195 aa10.84□□□□□ -0.67
UFD1-205ENST00000459854 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.84□□□□□ -0.67
UFD1-205ENST00000459854 KDM2BQ8NHM5 1336 aa10.84□□□□□ -0.67
UFD1-205ENST00000459854 SOCS7O14512 581 aa10.84□□□□□ -0.67
UFD1-205ENST00000459854 ETF1P62495 437 aaKnown RBP10.84□□□□□ -0.67
UFD1-205ENST00000459854 DYNC1I2Q13409 638 aaKnown RBP10.84□□□□□ -0.67
UFD1-205ENST00000459854 TTLL11Q8NHH1 800 aa10.84□□□□□ -0.67
UFD1-205ENST00000459854 RAB17Q9H0T7 212 aa10.84□□□□□ -0.67
UFD1-205ENST00000459854 KLHL14Q9P2G3 628 aa10.84□□□□□ -0.67
UFD1-205ENST00000459854 SMIM24O75264 130 aa10.83□□□□□ -0.68
UFD1-205ENST00000459854 ARHGAP27Q6ZUM4 889 aa10.83□□□□□ -0.68
UFD1-205ENST00000459854 RUFY3Q7L099 469 aa10.83□□□□□ -0.68
UFD1-205ENST00000459854 LARGE2Q8N3Y3 721 aa10.83□□□□□ -0.68
UFD1-205ENST00000459854 UBA5Q9GZZ9 404 aa10.83□□□□□ -0.68
UFD1-205ENST00000459854 MYO1AQ9UBC5 1043 aa10.83□□□□□ -0.68
UFD1-205ENST00000459854 SCN11AQ9UI33 1791 aa10.83□□□□□ -0.68
UFD1-205ENST00000459854 AFAP1L2Q8N4X5 818 aa10.83□□□□□ -0.68
UFD1-205ENST00000459854 STAG1Q8WVM7 1258 aa10.83□□□□□ -0.68
UFD1-205ENST00000459854 CRAMP1Q96RY5 1269 aa10.83□□□□□ -0.68
UFD1-205ENST00000459854 XDHP47989 1333 aa10.83□□□□□ -0.68
UFD1-205ENST00000459854 GSTA5Q7RTV2 222 aa10.83□□□□□ -0.68
UFD1-205ENST00000459854 BCAS4Q8TDM0 211 aa10.83□□□□□ -0.68
UFD1-205ENST00000459854 SLC26A6Q9BXS9 759 aa10.83□□□□□ -0.68
UFD1-205ENST00000459854 MMRN2Q9H8L6 949 aa10.83□□□□□ -0.68
UFD1-205ENST00000459854 CD2APQ9Y5K6 639 aa10.83□□□□□ -0.68
UFD1-205ENST00000459854 KLF18A0A0U1RQI7 1052 aa10.83□□□□□ -0.68
UFD1-205ENST00000459854 SF3B3Q15393 1217 aaKnown RBP10.83□□□□□ -0.68
UFD1-205ENST00000459854 STYK1Q6J9G0 422 aa10.83□□□□□ -0.68
UFD1-205ENST00000459854 HELBQ8NG08 1087 aaPredicted RBP10.83□□□□□ -0.68
UFD1-205ENST00000459854 NAP1L4Q99733 375 aaKnown RBP10.83□□□□□ -0.68
UFD1-205ENST00000459854 CCDC8Q9H0W5 538 aaPredicted RBP10.83□□□□□ -0.68
UFD1-205ENST00000459854 LEMD3Q9Y2U8 911 aa10.83□□□□□ -0.68
UFD1-205ENST00000459854 KCPQ6ZWJ8 1503 aa10.83□□□□□ -0.68
UFD1-205ENST00000459854 CIAO1O76071 339 aa10.82□□□□□ -0.68
UFD1-205ENST00000459854 TROVE2P10155 538 aaKnown RBP eCLIP10.82□□□□□ -0.68
UFD1-205ENST00000459854 ZNF131P52739 623 aa10.82□□□□□ -0.68
UFD1-205ENST00000459854 AK2P54819 239 aa10.82□□□□□ -0.68
UFD1-205ENST00000459854 NIM1KQ8IY84 436 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms