RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 ELOA2Q8IYF1 753 aaPredicted RBP22.11■■□□□ 1.13
CNEP1R1-203ENST00000458059 ADAM21Q9UKJ8 722 aa22.11■■□□□ 1.13
CNEP1R1-203ENST00000458059 ERVV-1B6SEH8 477 aa22.1■■□□□ 1.13
CNEP1R1-203ENST00000458059 PRCPP42785 496 aa22.1■■□□□ 1.13
CNEP1R1-203ENST00000458059 PMS1P54277 932 aaKnown RBP22.1■■□□□ 1.13
CNEP1R1-203ENST00000458059 RASGRP2Q7LDG7 609 aa22.1■■□□□ 1.13
CNEP1R1-203ENST00000458059 CCDC102AQ96A19 550 aa22.1■■□□□ 1.13
CNEP1R1-203ENST00000458059 FERMT2Q96AC1 680 aa22.1■■□□□ 1.13
CNEP1R1-203ENST00000458059 CTAGE1Q96RT6 745 aa22.1■■□□□ 1.13
CNEP1R1-203ENST00000458059 TMTC3Q6ZXV5 915 aa22.1■■□□□ 1.13
CNEP1R1-203ENST00000458059 CPVLQ9H3G5 476 aa22.1■■□□□ 1.13
CNEP1R1-203ENST00000458059 INTS5Q6P9B9 1019 aaKnown RBP22.09■■□□□ 1.13
CNEP1R1-203ENST00000458059 ZNF335Q9H4Z2 1342 aaPredicted RBP22.09■■□□□ 1.13
CNEP1R1-203ENST00000458059 BCL9O00512 1426 aa22.09■■□□□ 1.13
CNEP1R1-203ENST00000458059 TAF1P21675 1872 aa22.09■■□□□ 1.13
CNEP1R1-203ENST00000458059 COL4A1P02462 1669 aa22.09■■□□□ 1.13
CNEP1R1-203ENST00000458059 GTF2E1P29083 439 aaPredicted RBP22.09■■□□□ 1.13
CNEP1R1-203ENST00000458059 EIF5P55010 431 aaKnown RBP22.09■■□□□ 1.13
CNEP1R1-203ENST00000458059 SLC51AQ86UW1 340 aa22.09■■□□□ 1.13
CNEP1R1-203ENST00000458059 DCCP43146 1447 aa22.09■■□□□ 1.13
CNEP1R1-203ENST00000458059 CCDC151A5D8V7 595 aa22.08■■□□□ 1.13
CNEP1R1-203ENST00000458059 TSPY2A6NKD2 308 aa22.08■■□□□ 1.13
CNEP1R1-203ENST00000458059 STAT6P42226 847 aa22.08■■□□□ 1.13
CNEP1R1-203ENST00000458059 NAPGQ99747 312 aaPredicted RBP22.08■■□□□ 1.13
CNEP1R1-203ENST00000458059 FAM205AQ6ZU69 1335 aa22.08■■□□□ 1.13
CNEP1R1-203ENST00000458059 CNTNAP5Q8WYK1 1306 aa22.08■■□□□ 1.13
CNEP1R1-203ENST00000458059 ATP2C1P98194 919 aaPredicted RBP22.08■■□□□ 1.13
CNEP1R1-203ENST00000458059 TCP11X2Q5H9J9 407 aa22.08■■□□□ 1.13
CNEP1R1-203ENST00000458059 CCDC87Q9NVE4 849 aa22.08■■□□□ 1.13
CNEP1R1-203ENST00000458059 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.08■■□□□ 1.13
CNEP1R1-203ENST00000458059 CTAGE15A4D2H0 777 aa22.08■■□□□ 1.12
CNEP1R1-203ENST00000458059 CTAGE8P0CG41 777 aa22.08■■□□□ 1.12
CNEP1R1-203ENST00000458059 ERFEQ4G0M1 354 aa22.08■■□□□ 1.12
CNEP1R1-203ENST00000458059 CTAGE6Q86UF2 777 aa22.08■■□□□ 1.12
CNEP1R1-203ENST00000458059 CTAGE4Q8IX94 777 aa22.08■■□□□ 1.12
CNEP1R1-203ENST00000458059 RPN1P04843 607 aaKnown RBP22.07■■□□□ 1.12
CNEP1R1-203ENST00000458059 PRDX5P30044 214 aa22.07■■□□□ 1.12
CNEP1R1-203ENST00000458059 KLK7P49862 253 aa22.07■■□□□ 1.12
CNEP1R1-203ENST00000458059 E2F4Q16254 413 aa22.07■■□□□ 1.12
CNEP1R1-203ENST00000458059 BEND6Q5SZJ8 279 aaPredicted RBP22.07■■□□□ 1.12
CNEP1R1-203ENST00000458059 PDXDC2PQ6P474 469 aa22.07■■□□□ 1.12
CNEP1R1-203ENST00000458059 CEP112Q8N8E3 955 aa22.07■■□□□ 1.12
CNEP1R1-203ENST00000458059 FAN1Q9Y2M0 1017 aa22.07■■□□□ 1.12
CNEP1R1-203ENST00000458059 COL1A1P02452 1464 aaPredicted RBP22.07■■□□□ 1.12
CNEP1R1-203ENST00000458059 PLEKHG2Q9H7P9 1386 aa22.07■■□□□ 1.12
CNEP1R1-203ENST00000458059 TTC26A0AVF1 554 aa22.07■■□□□ 1.12
CNEP1R1-203ENST00000458059 SCG2P13521 617 aa22.07■■□□□ 1.12
CNEP1R1-203ENST00000458059 ARHGAP25P42331 645 aa22.07■■□□□ 1.12
CNEP1R1-203ENST00000458059 STAG2Q8N3U4 1231 aa22.07■■□□□ 1.12
CNEP1R1-203ENST00000458059 TNFRSF25Q93038 417 aa22.07■■□□□ 1.12
CNEP1R1-203ENST00000458059 UBXN6Q9BZV1 441 aa22.07■■□□□ 1.12
CNEP1R1-203ENST00000458059 ITPK1Q13572 414 aa22.06■■□□□ 1.12
CNEP1R1-203ENST00000458059 ZSCAN26Q16670 478 aa22.06■■□□□ 1.12
CNEP1R1-203ENST00000458059 CELF1Q92879 486 aaKnown RBP22.06■■□□□ 1.12
CNEP1R1-203ENST00000458059 PCMTD1Q96MG8 357 aaPredicted RBP22.06■■□□□ 1.12
CNEP1R1-203ENST00000458059 NAA15Q9BXJ9 866 aaKnown RBP22.06■■□□□ 1.12
CNEP1R1-203ENST00000458059 NTSR2O95665 410 aa22.06■■□□□ 1.12
CNEP1R1-203ENST00000458059 CAPN2P17655 700 aa22.06■■□□□ 1.12
CNEP1R1-203ENST00000458059 MRPS25P82663 173 aaKnown RBP22.06■■□□□ 1.12
CNEP1R1-203ENST00000458059 RAD51AP2Q09MP3 1159 aa22.06■■□□□ 1.12
CNEP1R1-203ENST00000458059 ANKRD18AQ8IVF6 992 aa22.06■■□□□ 1.12
CNEP1R1-203ENST00000458059 GSPT2Q8IYD1 628 aaKnown RBP22.06■■□□□ 1.12
CNEP1R1-203ENST00000458059 ANKRD20A12PQ8NF67 263 aa22.06■■□□□ 1.12
CNEP1R1-203ENST00000458059 PLEKHA4Q9H4M7 779 aa22.06■■□□□ 1.12
CNEP1R1-203ENST00000458059 GNL3LQ9NVN8 582 aaKnown RBP22.06■■□□□ 1.12
CNEP1R1-203ENST00000458059 PODXL2Q9NZ53 605 aa22.06■■□□□ 1.12
CNEP1R1-203ENST00000458059 NID2Q14112 1375 aa22.06■■□□□ 1.12
CNEP1R1-203ENST00000458059 CAMTA2O94983 1202 aa22.05■■□□□ 1.12
CNEP1R1-203ENST00000458059 GPS2Q13227 327 aa22.05■■□□□ 1.12
CNEP1R1-203ENST00000458059 CAVIN4Q5BKX8 364 aa22.05■■□□□ 1.12
CNEP1R1-203ENST00000458059 TMTC1Q8IUR5 882 aa22.05■■□□□ 1.12
CNEP1R1-203ENST00000458059 DYNLL2Q96FJ2 89 aa22.05■■□□□ 1.12
CNEP1R1-203ENST00000458059 USP17L8P0C7I0 530 aa22.05■■□□□ 1.12
CNEP1R1-203ENST00000458059 CYP26C1Q6V0L0 522 aa22.05■■□□□ 1.12
CNEP1R1-203ENST00000458059 REXO2Q9Y3B8 237 aaKnown RBP22.05■■□□□ 1.12
CNEP1R1-203ENST00000458059 ITGB4P16144 1822 aa22.05■■□□□ 1.12
CNEP1R1-203ENST00000458059 PARP1P09874 1014 aaKnown RBP22.05■■□□□ 1.12
CNEP1R1-203ENST00000458059 TRIM47Q96LD4 638 aa22.05■■□□□ 1.12
CNEP1R1-203ENST00000458059 TTF2Q9UNY4 1162 aaKnown RBP22.05■■□□□ 1.12
CNEP1R1-203ENST00000458059 GOLGA8HP0CJ92 632 aa22.04■■□□□ 1.12
CNEP1R1-203ENST00000458059 TNNT3P45378 269 aaPredicted RBP22.04■■□□□ 1.12
CNEP1R1-203ENST00000458059 MECOMQ03112 1051 aa22.04■■□□□ 1.12
CNEP1R1-203ENST00000458059 BRD3Q15059 726 aa22.04■■□□□ 1.12
CNEP1R1-203ENST00000458059 INF2Q27J81 1249 aa22.04■■□□□ 1.12
CNEP1R1-203ENST00000458059 TYW1BQ6NUM6 668 aa22.04■■□□□ 1.12
CNEP1R1-203ENST00000458059 HPS3Q969F9 1004 aa22.04■■□□□ 1.12
CNEP1R1-203ENST00000458059 FAM84BQ96KN1 310 aaPredicted RBP22.04■■□□□ 1.12
CNEP1R1-203ENST00000458059 TMEM60Q9H2L4 133 aa22.04■■□□□ 1.12
CNEP1R1-203ENST00000458059 GOLGB1Q14789 3259 aaKnown RBP22.04■■□□□ 1.12
CNEP1R1-203ENST00000458059 GTPBP6O43824 516 aaPredicted RBP22.04■■□□□ 1.12
CNEP1R1-203ENST00000458059 TXLNBQ8N3L3 684 aa22.04■■□□□ 1.12
CNEP1R1-203ENST00000458059 RBM28Q9NW13 759 aaKnown RBP22.04■■□□□ 1.12
CNEP1R1-203ENST00000458059 MCM9Q9NXL9 1143 aa22.04■■□□□ 1.12
CNEP1R1-203ENST00000458059 LCMT1Q9UIC8 334 aa22.04■■□□□ 1.12
CNEP1R1-203ENST00000458059 MYO6Q9UM54 1294 aa22.04■■□□□ 1.12
CNEP1R1-203ENST00000458059 EPN1Q9Y6I3 576 aaPredicted RBP22.04■■□□□ 1.12
CNEP1R1-203ENST00000458059 B4DLN1 442 aa22.03■■□□□ 1.12
CNEP1R1-203ENST00000458059 NKRFO15226 690 aaKnown RBP eCLIP22.03■■□□□ 1.12
CNEP1R1-203ENST00000458059 RWDD2AQ9UIY3 292 aa22.03■■□□□ 1.12
CNEP1R1-203ENST00000458059 MYH13Q9UKX3 1938 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms