RNA–Protein interactions for RNA: ENST00000457373.5

RFX3-210, Transcript of regulatory factor X3, humanhuman

TSL 5

Gene RFX3, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-210ENST00000457373 MCOLN1Q9GZU1 580 aa11.92□□□□□ -0.5
RFX3-210ENST00000457373 GOPCQ9HD26 462 aa11.92□□□□□ -0.5
RFX3-210ENST00000457373 MTMR4Q9NYA4 1195 aa11.92□□□□□ -0.5
RFX3-210ENST00000457373 CEP350Q5VT06 3117 aa11.92□□□□□ -0.5
RFX3-210ENST00000457373 MGAMO43451 1857 aa11.91□□□□□ -0.5
RFX3-210ENST00000457373 NEDD4P46934 1319 aa11.91□□□□□ -0.5
RFX3-210ENST00000457373 NMT2O60551 498 aa11.91□□□□□ -0.5
RFX3-210ENST00000457373 PEX10O60683 326 aa11.91□□□□□ -0.5
RFX3-210ENST00000457373 TTLL1O95922 423 aa11.91□□□□□ -0.5
RFX3-210ENST00000457373 GCLCP48506 637 aaPredicted RBP11.91□□□□□ -0.5
RFX3-210ENST00000457373 HERVK_113P62684 666 aa11.91□□□□□ -0.5
RFX3-210ENST00000457373 LACTBP83111 547 aaPredicted RBP11.91□□□□□ -0.5
RFX3-210ENST00000457373 CAP1Q01518 475 aa11.91□□□□□ -0.5
RFX3-210ENST00000457373 LRRC47Q8N1G4 583 aaKnown RBP11.91□□□□□ -0.5
RFX3-210ENST00000457373 NKX2-3Q8TAU0 364 aa11.91□□□□□ -0.5
RFX3-210ENST00000457373 PAGR1Q9BTK6 254 aa11.91□□□□□ -0.5
RFX3-210ENST00000457373 TANGO6Q9C0B7 1094 aa11.91□□□□□ -0.5
RFX3-210ENST00000457373 ARHGAP39Q9C0H5 1083 aa11.91□□□□□ -0.5
RFX3-210ENST00000457373 EFCC1Q9HA90 598 aa11.91□□□□□ -0.5
RFX3-210ENST00000457373 ANO2Q9NQ90 1003 aa11.91□□□□□ -0.5
RFX3-210ENST00000457373 IL17RBQ9NRM6 502 aa11.91□□□□□ -0.5
RFX3-210ENST00000457373 STX8Q9UNK0 236 aa11.91□□□□□ -0.5
RFX3-210ENST00000457373 PLIN4Q96Q06 1357 aa11.91□□□□□ -0.5
RFX3-210ENST00000457373 B4E1Z4 1266 aa11.9□□□□□ -0.5
RFX3-210ENST00000457373 F5H6K3 240 aa11.9□□□□□ -0.5
RFX3-210ENST00000457373 WDR46O15213 610 aaKnown RBP11.9□□□□□ -0.5
RFX3-210ENST00000457373 FMNL1O95466 1100 aaPredicted RBP11.9□□□□□ -0.5
RFX3-210ENST00000457373 CYP21A2P08686 494 aa11.9□□□□□ -0.5
RFX3-210ENST00000457373 PCP11498 1178 aaKnown RBP11.9□□□□□ -0.5
RFX3-210ENST00000457373 PSMC4P43686 418 aa11.9□□□□□ -0.5
RFX3-210ENST00000457373 KLRC3Q07444 240 aa11.9□□□□□ -0.5
RFX3-210ENST00000457373 COG2Q14746 738 aa11.9□□□□□ -0.5
RFX3-210ENST00000457373 ARHGEF6Q15052 776 aa11.9□□□□□ -0.5
RFX3-210ENST00000457373 FAM83BQ5T0W9 1011 aa11.9□□□□□ -0.5
RFX3-210ENST00000457373 OTOP1Q7RTM1 612 aa11.9□□□□□ -0.5
RFX3-210ENST00000457373 LPAR1Q92633 364 aa11.9□□□□□ -0.5
RFX3-210ENST00000457373 ESR2Q92731 530 aa11.9□□□□□ -0.5
RFX3-210ENST00000457373 MAP4K1Q92918 833 aa11.9□□□□□ -0.5
RFX3-210ENST00000457373 MKL1Q969V6 931 aa11.9□□□□□ -0.5
RFX3-210ENST00000457373 ZKSCAN3Q9BRR0 538 aa11.9□□□□□ -0.5
RFX3-210ENST00000457373 LSG1Q9H089 658 aaKnown RBP11.9□□□□□ -0.5
RFX3-210ENST00000457373 MTMR7Q9Y216 660 aa11.9□□□□□ -0.5
RFX3-210ENST00000457373 RBM8AQ9Y5S9 174 aaKnown RBP11.9□□□□□ -0.5
RFX3-210ENST00000457373 KDM4AO75164 1064 aa11.89□□□□□ -0.51
RFX3-210ENST00000457373 FLOT1O75955 427 aa11.89□□□□□ -0.51
RFX3-210ENST00000457373 NDUFB10O96000 172 aa11.89□□□□□ -0.51
RFX3-210ENST00000457373 CTGFP29279 349 aa11.89□□□□□ -0.51
RFX3-210ENST00000457373 MLLT3P42568 568 aaPredicted RBP11.89□□□□□ -0.51
RFX3-210ENST00000457373 Q3C1V9 767 aa11.89□□□□□ -0.51
RFX3-210ENST00000457373 PPP4R3BQ5MIZ7 849 aa11.89□□□□□ -0.51
RFX3-210ENST00000457373 SLFN13Q68D06 897 aa11.89□□□□□ -0.51
RFX3-210ENST00000457373 NUP88Q99567 741 aaPredicted RBP11.89□□□□□ -0.51
RFX3-210ENST00000457373 KRT23Q9C075 422 aa11.89□□□□□ -0.51
RFX3-210ENST00000457373 TXNRD2Q9NNW7 524 aa11.89□□□□□ -0.51
RFX3-210ENST00000457373 HOXC10Q9NYD6 342 aa11.89□□□□□ -0.51
RFX3-210ENST00000457373 RBPJLQ9UBG7 517 aa11.89□□□□□ -0.51
RFX3-210ENST00000457373 ISY1Q9ULR0 285 aaKnown RBP11.89□□□□□ -0.51
RFX3-210ENST00000457373 SPDYE16A6NNV3 312 aaPredicted RBP11.88□□□□□ -0.51
RFX3-210ENST00000457373 FCGRTP55899 365 aa11.88□□□□□ -0.51
RFX3-210ENST00000457373 TRDNQ13061 729 aa11.88□□□□□ -0.51
RFX3-210ENST00000457373 FAM110CQ1W6H9 321 aa11.88□□□□□ -0.51
RFX3-210ENST00000457373 GPRC5AQ8NFJ5 357 aa11.88□□□□□ -0.51
RFX3-210ENST00000457373 GTF3C2Q8WUA4 911 aaPredicted RBP11.88□□□□□ -0.51
RFX3-210ENST00000457373 TRIM47Q96LD4 638 aa11.88□□□□□ -0.51
RFX3-210ENST00000457373 CNNM2Q9H8M5 875 aa11.88□□□□□ -0.51
RFX3-210ENST00000457373 TCP11L1Q9NUJ3 509 aa11.88□□□□□ -0.51
RFX3-210ENST00000457373 FBXO28Q9NVF7 368 aa11.88□□□□□ -0.51
RFX3-210ENST00000457373 ZSWIM5Q9P217 1185 aa11.88□□□□□ -0.51
RFX3-210ENST00000457373 MORF4L1Q9UBU8 362 aa11.88□□□□□ -0.51
RFX3-210ENST00000457373 PARP14Q460N5 1801 aa11.88□□□□□ -0.51
RFX3-210ENST00000457373 RLFQ13129 1914 aa11.88□□□□□ -0.51
RFX3-210ENST00000457373 E7EWF7 191 aa11.87□□□□□ -0.51
RFX3-210ENST00000457373 TNPO2O14787 897 aaKnown RBP11.87□□□□□ -0.51
RFX3-210ENST00000457373 CNMDO75829 334 aa11.87□□□□□ -0.51
RFX3-210ENST00000457373 MCCP23508 829 aa11.87□□□□□ -0.51
RFX3-210ENST00000457373 HOXD10P28358 340 aa11.87□□□□□ -0.51
RFX3-210ENST00000457373 ERVK-9P63128 1117 aa11.87□□□□□ -0.51
RFX3-210ENST00000457373 ERVK-24P63145 666 aa11.87□□□□□ -0.51
RFX3-210ENST00000457373 PKN2Q16513 984 aaKnown RBP11.87□□□□□ -0.51
RFX3-210ENST00000457373 FBXO46Q6PJ61 603 aaPredicted RBP11.87□□□□□ -0.51
RFX3-210ENST00000457373 POTEEQ6S8J3 1075 aa11.87□□□□□ -0.51
RFX3-210ENST00000457373 IQCA1Q86XH1 822 aa11.87□□□□□ -0.51
RFX3-210ENST00000457373 CCAR1Q8IX12 1150 aaKnown RBP11.87□□□□□ -0.51
RFX3-210ENST00000457373 GMCL1P1Q8NEA9 526 aa11.87□□□□□ -0.51
RFX3-210ENST00000457373 ATG4CQ96DT6 458 aa11.87□□□□□ -0.51
RFX3-210ENST00000457373 TMEM47Q9BQJ4 181 aa11.87□□□□□ -0.51
RFX3-210ENST00000457373 BTBD7Q9P203 1132 aa11.87□□□□□ -0.51
RFX3-210ENST00000457373 PTPN22Q9Y2R2 807 aa11.87□□□□□ -0.51
RFX3-210ENST00000457373 RABGAP1Q9Y3P9 1069 aa11.87□□□□□ -0.51
RFX3-210ENST00000457373 TAF6LQ9Y6J9 622 aa11.87□□□□□ -0.51
RFX3-210ENST00000457373 COL11A1P12107 1806 aaPredicted RBP11.86□□□□□ -0.51
RFX3-210ENST00000457373 DOCK3Q8IZD9 2030 aa11.86□□□□□ -0.51
RFX3-210ENST00000457373 SLC27A2O14975 620 aa11.86□□□□□ -0.51
RFX3-210ENST00000457373 TOP1P11387 765 aaKnown RBP11.86□□□□□ -0.51
RFX3-210ENST00000457373 BMP3P12645 472 aa11.86□□□□□ -0.51
RFX3-210ENST00000457373 CCDC178Q5BJE1 867 aa11.86□□□□□ -0.51
RFX3-210ENST00000457373 CREB3L3Q68CJ9 461 aa11.86□□□□□ -0.51
RFX3-210ENST00000457373 STOX1Q6ZVD7 989 aa11.86□□□□□ -0.51
RFX3-210ENST00000457373 CYB5R4Q7L1T6 521 aa11.86□□□□□ -0.51
RFX3-210ENST00000457373 RALYLQ86SE5 291 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms