RNA–Protein interactions for RNA: ENST00000451871.1

KARSP1-201, Transcript of lysyl-tRNA synthetase pseudogene 1, humanhuman

BASIC

Gene KARSP1, Length 1,752 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARSP1-201ENST00000451871 BMP2P12643 396 aa7.79□□□□□ -1.16
KARSP1-201ENST00000451871 DNAJA1P31689 397 aaKnown RBP7.79□□□□□ -1.16
KARSP1-201ENST00000451871 PHKA2P46019 1235 aa7.79□□□□□ -1.16
KARSP1-201ENST00000451871 FGD1P98174 961 aa7.79□□□□□ -1.16
KARSP1-201ENST00000451871 ARHGEF6Q15052 776 aa7.79□□□□□ -1.16
KARSP1-201ENST00000451871 ZNF394Q53GI3 561 aa7.79□□□□□ -1.16
KARSP1-201ENST00000451871 MRPL14Q6P1L8 145 aaKnown RBP7.79□□□□□ -1.16
KARSP1-201ENST00000451871 GJD3Q8N144 294 aa7.79□□□□□ -1.16
KARSP1-201ENST00000451871 RNF217Q8TC41 542 aa7.79□□□□□ -1.16
KARSP1-201ENST00000451871 SH3TC2Q8TF17 1288 aa7.79□□□□□ -1.16
KARSP1-201ENST00000451871 WNK4Q96J92 1243 aa7.79□□□□□ -1.16
KARSP1-201ENST00000451871 FZD1Q9UP38 647 aa7.79□□□□□ -1.16
KARSP1-201ENST00000451871 PCDHGB7Q9Y5F8 929 aa7.79□□□□□ -1.16
KARSP1-201ENST00000451871 NR2E3Q9Y5X4 410 aa7.79□□□□□ -1.16
KARSP1-201ENST00000451871 COL3A1P02461 1466 aaPredicted RBP7.79□□□□□ -1.16
KARSP1-201ENST00000451871 HTATSF1O43719 755 aaKnown RBP7.78□□□□□ -1.16
KARSP1-201ENST00000451871 UPP2O95045 317 aa7.78□□□□□ -1.16
KARSP1-201ENST00000451871 AVPP01185 164 aa7.78□□□□□ -1.16
KARSP1-201ENST00000451871 EIF4A1P60842 406 aaKnown RBP7.78□□□□□ -1.16
KARSP1-201ENST00000451871 ORC1Q13415 861 aa7.78□□□□□ -1.16
KARSP1-201ENST00000451871 GNASQ5JWF2 1037 aa7.78□□□□□ -1.16
KARSP1-201ENST00000451871 PRICKLE2Q7Z3G6 844 aa7.78□□□□□ -1.16
KARSP1-201ENST00000451871 LRP10Q7Z4F1 713 aa7.78□□□□□ -1.16
KARSP1-201ENST00000451871 EDEM1Q92611 657 aa7.78□□□□□ -1.16
KARSP1-201ENST00000451871 SHISA4Q96DD7 197 aa7.78□□□□□ -1.16
KARSP1-201ENST00000451871 PTPN18Q99952 460 aa7.78□□□□□ -1.16
KARSP1-201ENST00000451871 THUMPD2Q9BTF0 503 aaKnown RBP7.78□□□□□ -1.16
KARSP1-201ENST00000451871 HTATIP2Q9BUP3 242 aa7.78□□□□□ -1.16
KARSP1-201ENST00000451871 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.78□□□□□ -1.16
KARSP1-201ENST00000451871 ALPK3Q96L96 1907 aa7.78□□□□□ -1.16
KARSP1-201ENST00000451871 SPATA31C2B4DYI2 1134 aa7.77□□□□□ -1.17
KARSP1-201ENST00000451871 ATP2B1P20020 1258 aa7.77□□□□□ -1.17
KARSP1-201ENST00000451871 BRD2P25440 801 aaKnown RBP7.77□□□□□ -1.17
KARSP1-201ENST00000451871 POU4F2Q12837 409 aa7.77□□□□□ -1.17
KARSP1-201ENST00000451871 SF3B3Q15393 1217 aaKnown RBP7.77□□□□□ -1.17
KARSP1-201ENST00000451871 MAP3K11Q16584 847 aa7.77□□□□□ -1.17
KARSP1-201ENST00000451871 C11orf91Q3C1V1 193 aa7.77□□□□□ -1.17
KARSP1-201ENST00000451871 HSP90AB3PQ58FF7 597 aa7.77□□□□□ -1.17
KARSP1-201ENST00000451871 UBE2Q1Q7Z7E8 422 aa7.77□□□□□ -1.17
KARSP1-201ENST00000451871 SLC43A3Q8NBI5 491 aa7.77□□□□□ -1.17
KARSP1-201ENST00000451871 CLMNQ96JQ2 1002 aa7.77□□□□□ -1.17
KARSP1-201ENST00000451871 COL4A1P02462 1669 aa7.77□□□□□ -1.17
KARSP1-201ENST00000451871 UFL1O94874 794 aa7.76□□□□□ -1.17
KARSP1-201ENST00000451871 GNA15P30679 374 aa7.76□□□□□ -1.17
KARSP1-201ENST00000451871 RPS8P62241 208 aaKnown RBP7.76□□□□□ -1.17
KARSP1-201ENST00000451871 ALG1LQ6GMV1 187 aa7.76□□□□□ -1.17
KARSP1-201ENST00000451871 ZNF662Q6ZS27 426 aa7.76□□□□□ -1.17
KARSP1-201ENST00000451871 PNISRQ8TF01 805 aaKnown RBP7.76□□□□□ -1.17
KARSP1-201ENST00000451871 STAP2Q9UGK3 403 aa7.76□□□□□ -1.17
KARSP1-201ENST00000451871 PDGFAP04085 211 aa7.76□□□□□ -1.17
KARSP1-201ENST00000451871 RACK1P63244 317 aaKnown RBP7.76□□□□□ -1.17
KARSP1-201ENST00000451871 CC2D1BQ5T0F9 858 aaKnown RBP7.76□□□□□ -1.17
KARSP1-201ENST00000451871 C1orf53Q5VUE5 145 aa7.76□□□□□ -1.17
KARSP1-201ENST00000451871 TRIM46Q7Z4K8 759 aa7.76□□□□□ -1.17
KARSP1-201ENST00000451871 PODNQ7Z5L7 613 aa7.76□□□□□ -1.17
KARSP1-201ENST00000451871 APOBEC3FQ8IUX4 373 aaKnown RBP7.76□□□□□ -1.17
KARSP1-201ENST00000451871 IFT43Q96FT9 208 aa7.76□□□□□ -1.17
KARSP1-201ENST00000451871 ANKIB1Q9P2G1 1089 aa7.76□□□□□ -1.17
KARSP1-201ENST00000451871 GGA1Q9UJY5 639 aa7.76□□□□□ -1.17
KARSP1-201ENST00000451871 DLG5Q8TDM6 1919 aa7.75□□□□□ -1.17
KARSP1-201ENST00000451871 ZSWIM8A7E2V4 1837 aa7.75□□□□□ -1.17
KARSP1-201ENST00000451871 A6NHS1 94 aa7.75□□□□□ -1.17
KARSP1-201ENST00000451871 RGS20O76081 388 aa7.75□□□□□ -1.17
KARSP1-201ENST00000451871 ANXA1P04083 346 aa7.75□□□□□ -1.17
KARSP1-201ENST00000451871 HSPA5P11021 654 aaKnown RBP7.75□□□□□ -1.17
KARSP1-201ENST00000451871 MZF1P28698 734 aaPredicted RBP7.75□□□□□ -1.17
KARSP1-201ENST00000451871 ZAP70P43403 619 aa7.75□□□□□ -1.17
KARSP1-201ENST00000451871 CCDC144BQ3MJ40 725 aa7.75□□□□□ -1.17
KARSP1-201ENST00000451871 ANKRD62A6NC57 917 aa7.74□□□□□ -1.17
KARSP1-201ENST00000451871 SASH1O94885 1247 aa7.74□□□□□ -1.17
KARSP1-201ENST00000451871 ATP4AP20648 1035 aa7.74□□□□□ -1.17
KARSP1-201ENST00000451871 GJA8P48165 433 aa7.74□□□□□ -1.17
KARSP1-201ENST00000451871 PROSER3Q2NL68 480 aa7.74□□□□□ -1.17
KARSP1-201ENST00000451871 COPS6Q7L5N1 327 aa7.74□□□□□ -1.17
KARSP1-201ENST00000451871 FAM89AQ96GI7 184 aa7.74□□□□□ -1.17
KARSP1-201ENST00000451871 MXD3Q9BW11 206 aa7.74□□□□□ -1.17
KARSP1-201ENST00000451871 DEFB129Q9H1M3 183 aa7.74□□□□□ -1.17
KARSP1-201ENST00000451871 ZFYVE28Q9HCC9 887 aa7.74□□□□□ -1.17
KARSP1-201ENST00000451871 MUC6Q6W4X9 2439 aa7.74□□□□□ -1.17
KARSP1-201ENST00000451871 TTLL8A6PVC2 850 aa7.74□□□□□ -1.17
KARSP1-201ENST00000451871 GJB1P08034 283 aa7.74□□□□□ -1.17
KARSP1-201ENST00000451871 RHOQP17081 205 aa7.74□□□□□ -1.17
KARSP1-201ENST00000451871 EIF2S2P20042 333 aaKnown RBP7.74□□□□□ -1.17
KARSP1-201ENST00000451871 MMP14P50281 582 aa7.74□□□□□ -1.17
KARSP1-201ENST00000451871 AIMP1Q12904 312 aaKnown RBP7.74□□□□□ -1.17
KARSP1-201ENST00000451871 TAF1CQ15572 869 aaPredicted RBP7.74□□□□□ -1.17
KARSP1-201ENST00000451871 DACT2Q5SW24 774 aa7.74□□□□□ -1.17
KARSP1-201ENST00000451871 LYSMD3Q7Z3D4 306 aa7.74□□□□□ -1.17
KARSP1-201ENST00000451871 ZNF280CQ8ND82 737 aa7.74□□□□□ -1.17
KARSP1-201ENST00000451871 CRELD1Q96HD1 420 aa7.74□□□□□ -1.17
KARSP1-201ENST00000451871 ARHGAP39Q9C0H5 1083 aa7.74□□□□□ -1.17
KARSP1-201ENST00000451871 AK5Q9Y6K8 562 aa7.74□□□□□ -1.17
KARSP1-201ENST00000451871 FIGNL2A6NMB9 653 aa7.73□□□□□ -1.17
KARSP1-201ENST00000451871 EIF1AYO14602 144 aaKnown RBP7.73□□□□□ -1.17
KARSP1-201ENST00000451871 OPLAHO14841 1288 aa7.73□□□□□ -1.17
KARSP1-201ENST00000451871 TREML1Q86YW5 311 aa7.73□□□□□ -1.17
KARSP1-201ENST00000451871 RHPN1Q8TCX5 695 aa7.73□□□□□ -1.17
KARSP1-201ENST00000451871 HSH2DQ96JZ2 352 aa7.73□□□□□ -1.17
KARSP1-201ENST00000451871 CUEDC1Q9NWM3 386 aaPredicted RBP7.73□□□□□ -1.17
KARSP1-201ENST00000451871 ZDHHC3Q9NYG2 299 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms