RNA–Protein interactions for RNA: ENST00000449864.5

HDLBP-223, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-223	ENST00000449864	MAP2K5	Q13163	448 aa		18.75	■□□□□ 0.59
HDLBP-223	ENST00000449864	ALX1	Q15699	326 aa		18.75	■□□□□ 0.59
HDLBP-223	ENST00000449864	MORN1	Q5T089	497 aa		18.75	■□□□□ 0.59
HDLBP-223	ENST00000449864	TRMT44	Q8IYL2	757 aa	Known RBP	18.75	■□□□□ 0.59
HDLBP-223	ENST00000449864	SHISA4	Q96DD7	197 aa		18.75	■□□□□ 0.59
HDLBP-223	ENST00000449864	MOV10L1	Q9BXT6	1211 aa	Known RBP	18.75	■□□□□ 0.59
HDLBP-223	ENST00000449864	SPATC1L	Q9H0A9	340 aa		18.75	■□□□□ 0.59
HDLBP-223	ENST00000449864	TOMM22	Q9NS69	142 aa		18.75	■□□□□ 0.59
HDLBP-223	ENST00000449864	FBXO28	Q9NVF7	368 aa		18.75	■□□□□ 0.59
HDLBP-223	ENST00000449864	MTMR4	Q9NYA4	1195 aa		18.75	■□□□□ 0.59
HDLBP-223	ENST00000449864	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	18.75	■□□□□ 0.59
HDLBP-223	ENST00000449864	ZMYM6	O95789	1325 aa		18.74	■□□□□ 0.59
HDLBP-223	ENST00000449864	SLC15A5	A6NIM6	579 aa		18.74	■□□□□ 0.59
HDLBP-223	ENST00000449864		F5H6K3	240 aa		18.74	■□□□□ 0.59
HDLBP-223	ENST00000449864	NDUFB10	O96000	172 aa		18.74	■□□□□ 0.59
HDLBP-223	ENST00000449864	KLRC3	Q07444	240 aa		18.74	■□□□□ 0.59
HDLBP-223	ENST00000449864	CWC27	Q6UX04	472 aa	Known RBP	18.74	■□□□□ 0.59
HDLBP-223	ENST00000449864	LRRC47	Q8N1G4	583 aa	Known RBP	18.74	■□□□□ 0.59
HDLBP-223	ENST00000449864	U2AF1L4	Q8WU68	220 aa	Known RBP	18.74	■□□□□ 0.59
HDLBP-223	ENST00000449864	NUP88	Q99567	741 aa	Predicted RBP	18.74	■□□□□ 0.59
HDLBP-223	ENST00000449864	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	18.74	■□□□□ 0.59	2e-10	■■□□□ 13.3
HDLBP-223	ENST00000449864	ANAPC4	Q9UJX5	808 aa		18.74	■□□□□ 0.59
HDLBP-223	ENST00000449864	ISY1	Q9ULR0	285 aa	Known RBP	18.74	■□□□□ 0.59
HDLBP-223	ENST00000449864	SYNPO2	Q9UMS6	1093 aa		18.74	■□□□□ 0.59
HDLBP-223	ENST00000449864	RANBP6	O60518	1105 aa	Known RBP	18.73	■□□□□ 0.59
HDLBP-223	ENST00000449864	FGA	P02671	866 aa		18.73	■□□□□ 0.59
HDLBP-223	ENST00000449864	PTPRE	P23469	700 aa		18.73	■□□□□ 0.59
HDLBP-223	ENST00000449864	PDE4A	P27815	886 aa		18.73	■□□□□ 0.59
HDLBP-223	ENST00000449864	PPP4R3B	Q5MIZ7	849 aa		18.73	■□□□□ 0.59
HDLBP-223	ENST00000449864	SHCBP1	Q8NEM2	672 aa		18.73	■□□□□ 0.59
HDLBP-223	ENST00000449864	USP6NL	Q92738	828 aa		18.73	■□□□□ 0.59
HDLBP-223	ENST00000449864	DEFB118	Q96PH6	123 aa		18.73	■□□□□ 0.59
HDLBP-223	ENST00000449864	HMX1	Q9NP08	348 aa	Predicted RBP	18.73	■□□□□ 0.59
HDLBP-223	ENST00000449864	PPP1R9A	Q9ULJ8	1098 aa		18.73	■□□□□ 0.59
HDLBP-223	ENST00000449864	PRKAR2A	P13861	404 aa	Known RBP	18.72	■□□□□ 0.59
HDLBP-223	ENST00000449864	ERCC3	P19447	782 aa		18.72	■□□□□ 0.59
HDLBP-223	ENST00000449864	TRIM32	Q13049	653 aa		18.72	■□□□□ 0.59
HDLBP-223	ENST00000449864	GRB14	Q14449	540 aa		18.72	■□□□□ 0.59
HDLBP-223	ENST00000449864	RRP12	Q5JTH9	1297 aa	Known RBP	18.72	■□□□□ 0.59
HDLBP-223	ENST00000449864	TTC22	Q5TAA0	569 aa		18.72	■□□□□ 0.59
HDLBP-223	ENST00000449864	NCAPG2	Q86XI2	1143 aa		18.72	■□□□□ 0.59
HDLBP-223	ENST00000449864	SLF1	Q9BQI6	1058 aa		18.72	■□□□□ 0.59
HDLBP-223	ENST00000449864	MROH8	Q9H579	483 aa		18.72	■□□□□ 0.59
HDLBP-223	ENST00000449864	PAK6	Q9NQU5	681 aa	Predicted RBP	18.72	■□□□□ 0.59
HDLBP-223	ENST00000449864	STX8	Q9UNK0	236 aa		18.72	■□□□□ 0.59
HDLBP-223	ENST00000449864	RPTOR	Q8N122	1335 aa		18.72	■□□□□ 0.59
HDLBP-223	ENST00000449864	ORC4	O43929	436 aa		18.71	■□□□□ 0.59
HDLBP-223	ENST00000449864	SGPL1	O95470	568 aa		18.71	■□□□□ 0.59
HDLBP-223	ENST00000449864	TFRC	P02786	760 aa	Known RBP	18.71	■□□□□ 0.59
HDLBP-223	ENST00000449864	HAND2	P61296	217 aa		18.71	■□□□□ 0.59
HDLBP-223	ENST00000449864	CCL14	Q16627	93 aa		18.71	■□□□□ 0.59
HDLBP-223	ENST00000449864	GMCL1P1	Q8NEA9	526 aa		18.71	■□□□□ 0.59
HDLBP-223	ENST00000449864	MKL1	Q969V6	931 aa		18.71	■□□□□ 0.59
HDLBP-223	ENST00000449864	INCENP	Q9NQS7	918 aa		18.71	■□□□□ 0.59
HDLBP-223	ENST00000449864	ALPK3	Q96L96	1907 aa		18.7	■□□□□ 0.58
HDLBP-223	ENST00000449864	VWA5A	O00534	786 aa		18.7	■□□□□ 0.58
HDLBP-223	ENST00000449864	FARP2	O94887	1054 aa	Predicted RBP	18.7	■□□□□ 0.58
HDLBP-223	ENST00000449864	TMEM132B	Q14DG7	1078 aa		18.7	■□□□□ 0.58
HDLBP-223	ENST00000449864	PRPF38B	Q5VTL8	546 aa	Known RBP	18.7	■□□□□ 0.58
HDLBP-223	ENST00000449864	SLFN13	Q68D06	897 aa		18.7	■□□□□ 0.58
HDLBP-223	ENST00000449864	DPP9	Q86TI2	863 aa		18.7	■□□□□ 0.58
HDLBP-223	ENST00000449864	ADAMTS5	Q9UNA0	930 aa		18.7	■□□□□ 0.58
HDLBP-223	ENST00000449864	CTDP1	Q9Y5B0	961 aa	Predicted RBP	18.7	■□□□□ 0.58
HDLBP-223	ENST00000449864	STRN	O43815	780 aa		18.69	■□□□□ 0.58
HDLBP-223	ENST00000449864	SLC25A27	O95847	323 aa		18.69	■□□□□ 0.58
HDLBP-223	ENST00000449864	GSPT1	P15170	499 aa	Known RBP	18.69	■□□□□ 0.58
HDLBP-223	ENST00000449864	ADORA2A	P29274	412 aa		18.69	■□□□□ 0.58
HDLBP-223	ENST00000449864	MFSD14C	Q5VZR4	134 aa		18.69	■□□□□ 0.58
HDLBP-223	ENST00000449864	PRPF38A	Q8NAV1	312 aa	Known RBP	18.69	■□□□□ 0.58
HDLBP-223	ENST00000449864	FEM1B	Q9UK73	627 aa		18.69	■□□□□ 0.58
HDLBP-223	ENST00000449864	MYH6	P13533	1939 aa		18.68	■□□□□ 0.58
HDLBP-223	ENST00000449864	NMT2	O60551	498 aa		18.68	■□□□□ 0.58
HDLBP-223	ENST00000449864	FCER1A	P12319	257 aa		18.68	■□□□□ 0.58
HDLBP-223	ENST00000449864	BMP3	P12645	472 aa		18.68	■□□□□ 0.58
HDLBP-223	ENST00000449864	CAPN2	P17655	700 aa		18.68	■□□□□ 0.58
HDLBP-223	ENST00000449864	COPB2	P35606	906 aa		18.68	■□□□□ 0.58
HDLBP-223	ENST00000449864	IK	Q13123	557 aa	Predicted RBP	18.68	■□□□□ 0.58
HDLBP-223	ENST00000449864	MAP3K21	Q5TCX8	1036 aa		18.68	■□□□□ 0.58
HDLBP-223	ENST00000449864	MFSD6	Q6ZSS7	791 aa		18.68	■□□□□ 0.58
HDLBP-223	ENST00000449864	KIFC2	Q96AC6	838 aa		18.68	■□□□□ 0.58
HDLBP-223	ENST00000449864	CHMP4C	Q96CF2	233 aa		18.68	■□□□□ 0.58
HDLBP-223	ENST00000449864	SLC5A4	Q9NY91	659 aa		18.68	■□□□□ 0.58
HDLBP-223	ENST00000449864	ZNF214	Q9UL59	606 aa	Predicted RBP	18.68	■□□□□ 0.58
HDLBP-223	ENST00000449864	TACC3	Q9Y6A5	838 aa		18.68	■□□□□ 0.58
HDLBP-223	ENST00000449864	ZNF213	O14771	459 aa		18.67	■□□□□ 0.58
HDLBP-223	ENST00000449864	ZBED4	O75132	1171 aa		18.67	■□□□□ 0.58
HDLBP-223	ENST00000449864	HOXC6	P09630	235 aa		18.67	■□□□□ 0.58
HDLBP-223	ENST00000449864	PC	P11498	1178 aa	Known RBP	18.67	■□□□□ 0.58
HDLBP-223	ENST00000449864	STAT3	P40763	770 aa		18.67	■□□□□ 0.58
HDLBP-223	ENST00000449864	CACNB2	Q08289	660 aa	Predicted RBP	18.67	■□□□□ 0.58
HDLBP-223	ENST00000449864	AKNAD1	Q5T1N1	836 aa		18.67	■□□□□ 0.58
HDLBP-223	ENST00000449864	RIOX2	Q8IUF8	465 aa		18.67	■□□□□ 0.58
HDLBP-223	ENST00000449864	ABRA	Q8N0Z2	381 aa		18.67	■□□□□ 0.58
HDLBP-223	ENST00000449864	NPLOC4	Q8TAT6	608 aa		18.67	■□□□□ 0.58
HDLBP-223	ENST00000449864	MMP19	Q99542	508 aa		18.67	■□□□□ 0.58
HDLBP-223	ENST00000449864	TEX13B	Q9BXU2	312 aa		18.67	■□□□□ 0.58
HDLBP-223	ENST00000449864	RNF41	Q9H4P4	317 aa	Predicted RBP	18.67	■□□□□ 0.58
HDLBP-223	ENST00000449864	IL17RB	Q9NRM6	502 aa		18.67	■□□□□ 0.58
HDLBP-223	ENST00000449864	FLRT1	Q9NZU1	646 aa		18.67	■□□□□ 0.58
HDLBP-223	ENST00000449864	MCM3AP	O60318	1980 aa		18.67	■□□□□ 0.58

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