RNA–Protein interactions for RNA: ENST00000449489.5

RBM39-218, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-218ENST00000449489 CLTBP09497 229 aa9.08□□□□□ -0.96
RBM39-218ENST00000449489 CNGA1P29973 690 aa9.08□□□□□ -0.96
RBM39-218ENST00000449489 RFX5P48382 616 aaPredicted RBP9.08□□□□□ -0.96
RBM39-218ENST00000449489 EPHB4P54760 987 aa9.08□□□□□ -0.96
RBM39-218ENST00000449489 TLE2Q04725 743 aa9.08□□□□□ -0.96
RBM39-218ENST00000449489 FPGSQ05932 587 aa9.08□□□□□ -0.96
RBM39-218ENST00000449489 PICALMQ13492 652 aa9.08□□□□□ -0.96
RBM39-218ENST00000449489 AAK1Q2M2I8 961 aa9.08□□□□□ -0.96
RBM39-218ENST00000449489 ATG9AQ7Z3C6 839 aa9.08□□□□□ -0.96
RBM39-218ENST00000449489 TOX2Q96NM4 488 aa9.08□□□□□ -0.96
RBM39-218ENST00000449489 LRFN3Q9BTN0 628 aa9.08□□□□□ -0.96
RBM39-218ENST00000449489 DHX36Q9H2U1 1008 aaKnown RBP9.08□□□□□ -0.96
RBM39-218ENST00000449489 PI4KBQ9UBF8 816 aa9.08□□□□□ -0.96
RBM39-218ENST00000449489 FAM196BA6NMK8 535 aa9.07□□□□□ -0.96
RBM39-218ENST00000449489 STRNO43815 780 aa9.07□□□□□ -0.96
RBM39-218ENST00000449489 CNMDO75829 334 aa9.07□□□□□ -0.96
RBM39-218ENST00000449489 CIAO1O76071 339 aa9.07□□□□□ -0.96
RBM39-218ENST00000449489 ITGB8P26012 769 aa9.07□□□□□ -0.96
RBM39-218ENST00000449489 CYP2C19P33261 490 aa9.07□□□□□ -0.96
RBM39-218ENST00000449489 LRRC41Q15345 812 aa9.07□□□□□ -0.96
RBM39-218ENST00000449489 SKIV2LQ15477 1246 aaKnown RBP9.07□□□□□ -0.96
RBM39-218ENST00000449489 ATP2B3Q16720 1220 aa9.07□□□□□ -0.96
RBM39-218ENST00000449489 RASIP1Q5U651 963 aa9.07□□□□□ -0.96
RBM39-218ENST00000449489 SLC4A10Q6U841 1118 aa9.07□□□□□ -0.96
RBM39-218ENST00000449489 KLHDC4Q8TBB5 520 aa9.07□□□□□ -0.96
RBM39-218ENST00000449489 C12orf42Q96LP6 360 aa9.07□□□□□ -0.96
RBM39-218ENST00000449489 ZBED2Q9BTP6 218 aa9.07□□□□□ -0.96
RBM39-218ENST00000449489 CWC22Q9HCG8 908 aaKnown RBP9.07□□□□□ -0.96
RBM39-218ENST00000449489 PHF24Q9UPV7 400 aa9.07□□□□□ -0.96
RBM39-218ENST00000449489 IVNS1ABPQ9Y6Y0 642 aa9.07□□□□□ -0.96
RBM39-218ENST00000449489 ZNF236Q9UL36 1845 aa9.07□□□□□ -0.96
RBM39-218ENST00000449489 PLXNA1Q9UIW2 1896 aa9.06□□□□□ -0.96
RBM39-218ENST00000449489 USP17L15C9J2P7 530 aa9.06□□□□□ -0.96
RBM39-218ENST00000449489 USP17L13C9JLJ4 530 aa9.06□□□□□ -0.96
RBM39-218ENST00000449489 USP17L11C9JVI0 530 aa9.06□□□□□ -0.96
RBM39-218ENST00000449489 USP17L18D6R9N7 530 aa9.06□□□□□ -0.96
RBM39-218ENST00000449489 USP17L22D6RA61 530 aa9.06□□□□□ -0.96
RBM39-218ENST00000449489 USP17L17D6RBQ6 530 aa9.06□□□□□ -0.96
RBM39-218ENST00000449489 USP17L19D6RCP7 530 aa9.06□□□□□ -0.96
RBM39-218ENST00000449489 USP17L20D6RJB6 530 aa9.06□□□□□ -0.96
RBM39-218ENST00000449489 GPR37L1O60883 481 aa9.06□□□□□ -0.96
RBM39-218ENST00000449489 LDHCP07864 332 aa9.06□□□□□ -0.96
RBM39-218ENST00000449489 RAG1P15918 1043 aa9.06□□□□□ -0.96
RBM39-218ENST00000449489 ADCYAP1R1P41586 468 aa9.06□□□□□ -0.96
RBM39-218ENST00000449489 PHKA1P46020 1223 aa9.06□□□□□ -0.96
RBM39-218ENST00000449489 USP17L24Q0WX57 530 aa9.06□□□□□ -0.96
RBM39-218ENST00000449489 CCDC174Q6PII3 467 aa9.06□□□□□ -0.96
RBM39-218ENST00000449489 USP17L2Q6R6M4 530 aa9.06□□□□□ -0.96
RBM39-218ENST00000449489 ANKRD33Q7Z3H0 272 aa9.06□□□□□ -0.96
RBM39-218ENST00000449489 FOXP4Q8IVH2 680 aaPredicted RBP9.06□□□□□ -0.96
RBM39-218ENST00000449489 WDR63Q8IWG1 891 aa9.06□□□□□ -0.96
RBM39-218ENST00000449489 NPLOC4Q8TAT6 608 aa9.06□□□□□ -0.96
RBM39-218ENST00000449489 PAGR1Q9BTK6 254 aa9.06□□□□□ -0.96
RBM39-218ENST00000449489 TMEM134Q9H6X4 195 aa9.06□□□□□ -0.96
RBM39-218ENST00000449489 CEP126Q9P2H0 1117 aa9.06□□□□□ -0.96
RBM39-218ENST00000449489 NRBP1Q9UHY1 535 aa9.06□□□□□ -0.96
RBM39-218ENST00000449489 RABGEF1Q9UJ41 708 aa9.06□□□□□ -0.96
RBM39-218ENST00000449489 GSTO1P78417 241 aa9.05□□□□□ -0.96
RBM39-218ENST00000449489 MECOMQ03112 1051 aa9.05□□□□□ -0.96
RBM39-218ENST00000449489 EXOSC9Q06265 439 aaKnown RBP9.05□□□□□ -0.96
RBM39-218ENST00000449489 RASGRF1Q13972 1273 aa9.05□□□□□ -0.96
RBM39-218ENST00000449489 ADGRE1Q14246 886 aa9.05□□□□□ -0.96
RBM39-218ENST00000449489 TMEM31Q5JXX7 168 aa9.05□□□□□ -0.96
RBM39-218ENST00000449489 CCDC102BQ68D86 513 aa9.05□□□□□ -0.96
RBM39-218ENST00000449489 CATSPERGQ6ZRH7 1159 aa9.05□□□□□ -0.96
RBM39-218ENST00000449489 ZNF384Q8TF68 577 aa9.05□□□□□ -0.96
RBM39-218ENST00000449489 PPM1EQ8WY54 764 aa9.05□□□□□ -0.96
RBM39-218ENST00000449489 PBX4Q9BYU1 374 aa9.05□□□□□ -0.96
RBM39-218ENST00000449489 PRDM12Q9H4Q4 367 aa9.05□□□□□ -0.96
RBM39-218ENST00000449489 PRKRIP1Q9H875 184 aaPredicted RBP9.05□□□□□ -0.96
RBM39-218ENST00000449489 ABCF2Q9UG63 623 aa9.05□□□□□ -0.96
RBM39-218ENST00000449489 WDR87Q6ZQQ6 2873 aa9.05□□□□□ -0.96
RBM39-218ENST00000449489 SIPA1L1O43166 1804 aa9.04□□□□□ -0.96
RBM39-218ENST00000449489 ERC2O15083 957 aa9.04□□□□□ -0.96
RBM39-218ENST00000449489 TIMP1P01033 207 aa9.04□□□□□ -0.96
RBM39-218ENST00000449489 IL15P40933 162 aaPredicted RBP9.04□□□□□ -0.96
RBM39-218ENST00000449489 JAG1P78504 1218 aa9.04□□□□□ -0.96
RBM39-218ENST00000449489 RAB30Q15771 203 aa9.04□□□□□ -0.96
RBM39-218ENST00000449489 PROX2Q3B8N5 592 aa9.04□□□□□ -0.96
RBM39-218ENST00000449489 MFSD5Q6N075 450 aa9.04□□□□□ -0.96
RBM39-218ENST00000449489 ABRAQ8N0Z2 381 aa9.04□□□□□ -0.96
RBM39-218ENST00000449489 SLC44A5Q8NCS7 719 aa9.04□□□□□ -0.96
RBM39-218ENST00000449489 HERVK_113Q902F9 699 aa9.04□□□□□ -0.96
RBM39-218ENST00000449489 NSUN4Q96CB9 384 aaKnown RBP9.04□□□□□ -0.96
RBM39-218ENST00000449489 SNX27Q96L92 541 aa9.04□□□□□ -0.96
RBM39-218ENST00000449489 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.04□□□□□ -0.966e-63■■■□□ 17.9
RBM39-218ENST00000449489 USP44Q9H0E7 712 aa9.04□□□□□ -0.96
RBM39-218ENST00000449489 TMEM39AQ9NV64 488 aa9.04□□□□□ -0.96
RBM39-218ENST00000449489 SLC5A4Q9NY91 659 aa9.04□□□□□ -0.96
RBM39-218ENST00000449489 KIAA1468Q9P260 1216 aa9.04□□□□□ -0.96
RBM39-218ENST00000449489 ZBTB21Q9ULJ3 1066 aa9.04□□□□□ -0.96
RBM39-218ENST00000449489 CACNA1HO95180 2353 aa9.04□□□□□ -0.96
RBM39-218ENST00000449489 ROBO3Q96MS0 1386 aa9.03□□□□□ -0.96
RBM39-218ENST00000449489 IGSF3O75054 1194 aa9.03□□□□□ -0.96
RBM39-218ENST00000449489 POU3F3P20264 500 aaPredicted RBP9.03□□□□□ -0.96
RBM39-218ENST00000449489 USP14P54578 494 aa9.03□□□□□ -0.96
RBM39-218ENST00000449489 LSM11P83369 360 aaKnown RBP eCLIP9.03□□□□□ -0.961e-13■□□□□ 8.6
RBM39-218ENST00000449489 FAAP100Q0VG06 881 aa9.03□□□□□ -0.96
RBM39-218ENST00000449489 PPIGQ13427 754 aaKnown RBP eCLIP9.03□□□□□ -0.964e-21■□□□□ 10.1
RBM39-218ENST00000449489 TMEM240Q5SV17 173 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms