RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 PCDHA4Q9UN74 947 aa19.97■□□□□ 0.79
SMC6-206ENST00000446852 BECN2A8MW95 431 aa19.97■□□□□ 0.79
SMC6-206ENST00000446852 POLR2DO15514 142 aaKnown RBP19.97■□□□□ 0.79
SMC6-206ENST00000446852 ZNF500O60304 480 aaPredicted RBP19.97■□□□□ 0.79
SMC6-206ENST00000446852 SLURP2P0DP57 97 aa19.97■□□□□ 0.79
SMC6-206ENST00000446852 SHMT1P34896 483 aa19.97■□□□□ 0.79
SMC6-206ENST00000446852 CACNB3P54284 484 aa19.97■□□□□ 0.79
SMC6-206ENST00000446852 C10orf71Q711Q0 1435 aa19.97■□□□□ 0.79
SMC6-206ENST00000446852 HEATR3Q7Z4Q2 680 aa19.97■□□□□ 0.79
SMC6-206ENST00000446852 TTC12Q9H892 705 aaPredicted RBP19.97■□□□□ 0.79
SMC6-206ENST00000446852 STXBP3O00186 592 aa19.96■□□□□ 0.79
SMC6-206ENST00000446852 MDM2Q00987 491 aaPredicted RBP19.96■□□□□ 0.79
SMC6-206ENST00000446852 KIAA2012Q0VF49 1180 aa19.96■□□□□ 0.79
SMC6-206ENST00000446852 ISM2Q6H9L7 571 aa19.96■□□□□ 0.79
SMC6-206ENST00000446852 FOXP4Q8IVH2 680 aaPredicted RBP19.96■□□□□ 0.79
SMC6-206ENST00000446852 RASGRP4Q8TDF6 673 aa19.96■□□□□ 0.79
SMC6-206ENST00000446852 BARHL2Q9NY43 387 aa19.96■□□□□ 0.79
SMC6-206ENST00000446852 USP17L5A8MUK1 530 aa19.96■□□□□ 0.79
SMC6-206ENST00000446852 M0R2N6 131 aa19.96■□□□□ 0.79
SMC6-206ENST00000446852 BMP15O95972 392 aa19.96■□□□□ 0.79
SMC6-206ENST00000446852 SARM1Q6SZW1 724 aa19.96■□□□□ 0.79
SMC6-206ENST00000446852 BPIFA3Q9BQP9 254 aa19.96■□□□□ 0.79
SMC6-206ENST00000446852 SWAP70Q9UH65 585 aa19.96■□□□□ 0.79
SMC6-206ENST00000446852 TRAPPC10P48553 1259 aa19.95■□□□□ 0.78
SMC6-206ENST00000446852 ATP2C1P98194 919 aaPredicted RBP19.95■□□□□ 0.78
SMC6-206ENST00000446852 PTGDRQ13258 359 aa19.95■□□□□ 0.78
SMC6-206ENST00000446852 DEFB132Q7Z7B7 95 aa19.95■□□□□ 0.78
SMC6-206ENST00000446852 LRRC47Q8N1G4 583 aaKnown RBP19.95■□□□□ 0.78
SMC6-206ENST00000446852 MRIQ9BWK5 157 aa19.95■□□□□ 0.78
SMC6-206ENST00000446852 MYO3BQ8WXR4 1341 aa19.95■□□□□ 0.78
SMC6-206ENST00000446852 C21orf2O43822 256 aa19.95■□□□□ 0.78
SMC6-206ENST00000446852 EIF6P56537 245 aaKnown RBP19.95■□□□□ 0.78
SMC6-206ENST00000446852 PDILTQ8N807 584 aa19.95■□□□□ 0.78
SMC6-206ENST00000446852 SERTAD1Q9UHV2 236 aa19.95■□□□□ 0.78
SMC6-206ENST00000446852 PDHBP11177 359 aa19.94■□□□□ 0.78
SMC6-206ENST00000446852 ELOA2Q8IYF1 753 aaPredicted RBP19.94■□□□□ 0.78
SMC6-206ENST00000446852 FERMT2Q96AC1 680 aa19.94■□□□□ 0.78
SMC6-206ENST00000446852 EPSTI1Q96J88 318 aa19.94■□□□□ 0.78
SMC6-206ENST00000446852 A0A087X0B3 334 aa19.94■□□□□ 0.78
SMC6-206ENST00000446852 ACTN4O43707 911 aaKnown RBP19.94■□□□□ 0.78
SMC6-206ENST00000446852 HDLBPQ00341 1268 aaKnown RBP19.94■□□□□ 0.78
SMC6-206ENST00000446852 DAGLBQ8NCG7 672 aa19.94■□□□□ 0.78
SMC6-206ENST00000446852 CCDC148Q8NFR7 591 aa19.94■□□□□ 0.78
SMC6-206ENST00000446852 DNAJC18Q9H819 358 aa19.94■□□□□ 0.78
SMC6-206ENST00000446852 PCDHA5Q9Y5H7 936 aa19.94■□□□□ 0.78
SMC6-206ENST00000446852 YDJCA8MPS7 323 aa19.93■□□□□ 0.78
SMC6-206ENST00000446852 HLA-DOAP06340 250 aa19.93■□□□□ 0.78
SMC6-206ENST00000446852 MCM7P33993 719 aa19.93■□□□□ 0.78
SMC6-206ENST00000446852 RBM5P52756 815 aaKnown RBP eCLIP19.93■□□□□ 0.78
SMC6-206ENST00000446852 TCP10Q12799 353 aa19.93■□□□□ 0.78
SMC6-206ENST00000446852 HOMER1Q86YM7 354 aa19.93■□□□□ 0.78
SMC6-206ENST00000446852 KCNF1Q9H3M0 494 aa19.93■□□□□ 0.78
SMC6-206ENST00000446852 FAM198AQ9UFP1 575 aa19.93■□□□□ 0.78
SMC6-206ENST00000446852 PCDHA6Q9UN73 950 aa19.93■□□□□ 0.78
SMC6-206ENST00000446852 PCDHA8Q9Y5H6 950 aa19.93■□□□□ 0.78
SMC6-206ENST00000446852 PRR29P0C7W0 189 aa19.93■□□□□ 0.78
SMC6-206ENST00000446852 CC2D2BQ6DHV5 1058 aa19.93■□□□□ 0.78
SMC6-206ENST00000446852 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.93■□□□□ 0.78
SMC6-206ENST00000446852 SYMPKQ92797 1274 aaKnown RBP19.93■□□□□ 0.78
SMC6-206ENST00000446852 EHD4Q9H223 541 aa19.93■□□□□ 0.78
SMC6-206ENST00000446852 FRMPD2Q68DX3 1309 aaPredicted RBP19.92■□□□□ 0.78
SMC6-206ENST00000446852 POSTNQ15063 836 aa19.92■□□□□ 0.78
SMC6-206ENST00000446852 GRAMD1CQ8IYS0 662 aa19.92■□□□□ 0.78
SMC6-206ENST00000446852 UBA5Q9GZZ9 404 aa19.92■□□□□ 0.78
SMC6-206ENST00000446852 CLIP2Q9UDT6 1046 aa19.92■□□□□ 0.78
SMC6-206ENST00000446852 SERPINA10Q9UK55 444 aa19.92■□□□□ 0.78
SMC6-206ENST00000446852 VWA3AA6NCI4 1184 aa19.92■□□□□ 0.78
SMC6-206ENST00000446852 DDTLA6NHG4 134 aaPredicted RBP19.92■□□□□ 0.78
SMC6-206ENST00000446852 PPIP5K2O43314 1243 aa19.92■□□□□ 0.78
SMC6-206ENST00000446852 SMARCA1P28370 1054 aa19.92■□□□□ 0.78
SMC6-206ENST00000446852 PIGSQ96S52 555 aa19.92■□□□□ 0.78
SMC6-206ENST00000446852 IDI2Q9BXS1 227 aa19.92■□□□□ 0.78
SMC6-206ENST00000446852 TTLL1O95922 423 aa19.91■□□□□ 0.78
SMC6-206ENST00000446852 SNHG28P0DPA3 235 aa19.91■□□□□ 0.78
SMC6-206ENST00000446852 BMP6P22004 513 aa19.91■□□□□ 0.78
SMC6-206ENST00000446852 NCAPHQ15003 741 aa19.91■□□□□ 0.78
SMC6-206ENST00000446852 IL17AQ16552 155 aa19.91■□□□□ 0.78
SMC6-206ENST00000446852 GALNT17Q6IS24 598 aa19.91■□□□□ 0.78
SMC6-206ENST00000446852 SH3BP5LQ7L8J4 393 aa19.91■□□□□ 0.78
SMC6-206ENST00000446852 RRP36Q96EU6 259 aaKnown RBP19.91■□□□□ 0.78
SMC6-206ENST00000446852 VAT1LQ9HCJ6 419 aa19.91■□□□□ 0.78
SMC6-206ENST00000446852 NRBP1Q9UHY1 535 aa19.91■□□□□ 0.78
SMC6-206ENST00000446852 KIF13BQ9NQT8 1826 aa19.91■□□□□ 0.78
SMC6-206ENST00000446852 FAM196BA6NMK8 535 aa19.91■□□□□ 0.78
SMC6-206ENST00000446852 GOLGA6L6A8MZA4 724 aa19.91■□□□□ 0.78
SMC6-206ENST00000446852 C4orf32Q8N8J7 132 aa19.91■□□□□ 0.78
SMC6-206ENST00000446852 ZMYND12Q9H0C1 365 aa19.91■□□□□ 0.78
SMC6-206ENST00000446852 RIOX1Q9H6W3 641 aa19.91■□□□□ 0.78
SMC6-206ENST00000446852 COL4A5P29400 1685 aa19.9■□□□□ 0.78
SMC6-206ENST00000446852 CCDC194A0A1B0GVG4 234 aa19.9■□□□□ 0.78
SMC6-206ENST00000446852 PTGS1P23219 599 aa19.9■□□□□ 0.78
SMC6-206ENST00000446852 CDC25BP30305 580 aa19.9■□□□□ 0.78
SMC6-206ENST00000446852 BAG6P46379 1132 aa19.9■□□□□ 0.78
SMC6-206ENST00000446852 NAPAP54920 295 aa19.9■□□□□ 0.78
SMC6-206ENST00000446852 DRC7Q8IY82 874 aa19.9■□□□□ 0.78
SMC6-206ENST00000446852 SUPT20HQ8NEM7 779 aa19.9■□□□□ 0.78
SMC6-206ENST00000446852 MRFAP1L1Q96HT8 127 aa19.9■□□□□ 0.78
SMC6-206ENST00000446852 HOOK1Q9UJC3 728 aaKnown RBP19.9■□□□□ 0.78
SMC6-206ENST00000446852 FAM177A1Q8N128 213 aaPredicted RBP19.9■□□□□ 0.78
SMC6-206ENST00000446852 DHX58Q96C10 678 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms