RNA–Protein interactions for RNA: ENST00000442515.5

LINC00642-202, long intergenic non-protein coding RNA 642, humanhuman

TSL 3 BASIC

Gene LINC00642, Length 670 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-202ENST00000442515 KIAA1755Q5JYT7 1200 aa17■□□□□ 0.31
LINC00642-202ENST00000442515 CERS3Q8IU89 383 aa17■□□□□ 0.31
LINC00642-202ENST00000442515 NUP133Q8WUM0 1156 aa17■□□□□ 0.31
LINC00642-202ENST00000442515 TSEN34Q9BSV6 310 aaKnown RBP17■□□□□ 0.31
LINC00642-202ENST00000442515 FPGT-TNNI3KV9GXZ4 949 aa17■□□□□ 0.31
LINC00642-202ENST00000442515 SYNRGQ9UMZ2 1314 aa16.99■□□□□ 0.31
LINC00642-202ENST00000442515 MPHOSPH10O00566 681 aaKnown RBP16.99■□□□□ 0.31
LINC00642-202ENST00000442515 IDH1O75874 414 aaKnown RBP16.99■□□□□ 0.31
LINC00642-202ENST00000442515 FLOT1O75955 427 aa16.99■□□□□ 0.31
LINC00642-202ENST00000442515 RAB30Q15771 203 aa16.99■□□□□ 0.31
LINC00642-202ENST00000442515 CDCA7LQ96GN5 454 aa16.99■□□□□ 0.31
LINC00642-202ENST00000442515 MMP19Q99542 508 aa16.99■□□□□ 0.31
LINC00642-202ENST00000442515 CXXC1Q9P0U4 656 aaPredicted RBP16.99■□□□□ 0.31
LINC00642-202ENST00000442515 SYNGAP1Q96PV0 1343 aa16.98■□□□□ 0.31
LINC00642-202ENST00000442515 MOXD2PA6NHM9 499 aa16.98■□□□□ 0.31
LINC00642-202ENST00000442515 ACRP10323 421 aa16.98■□□□□ 0.31
LINC00642-202ENST00000442515 CSF2RAP15509 400 aa16.98■□□□□ 0.31
LINC00642-202ENST00000442515 GABPAQ06546 454 aa16.98■□□□□ 0.31
LINC00642-202ENST00000442515 TMEM132BQ14DG7 1078 aa16.98■□□□□ 0.31
LINC00642-202ENST00000442515 PSRC1Q6PGN9 363 aaPredicted RBP16.98■□□□□ 0.31
LINC00642-202ENST00000442515 SAMD1Q6SPF0 538 aaPredicted RBP16.98■□□□□ 0.31
LINC00642-202ENST00000442515 MAGEB6Q8N7X4 407 aa16.98■□□□□ 0.31
LINC00642-202ENST00000442515 ZNF512BQ96KM6 892 aaPredicted RBP16.98■□□□□ 0.31
LINC00642-202ENST00000442515 GPR108Q9NPR9 543 aa16.98■□□□□ 0.31
LINC00642-202ENST00000442515 MSRAQ9UJ68 235 aa16.98■□□□□ 0.31
LINC00642-202ENST00000442515 MROH7Q68CQ1 1323 aa16.97■□□□□ 0.31
LINC00642-202ENST00000442515 SLC25A27O95847 323 aa16.97■□□□□ 0.31
LINC00642-202ENST00000442515 BMP1P13497 986 aa16.97■□□□□ 0.31
LINC00642-202ENST00000442515 EVX2Q03828 476 aa16.97■□□□□ 0.31
LINC00642-202ENST00000442515 ZNF792Q3KQV3 632 aa16.97■□□□□ 0.31
LINC00642-202ENST00000442515 CCSAPQ6IQ19 270 aaPredicted RBP16.97■□□□□ 0.31
LINC00642-202ENST00000442515 ZNF365Q70YC5 407 aa16.97■□□□□ 0.31
LINC00642-202ENST00000442515 SPICE1Q8N0Z3 855 aa16.97■□□□□ 0.31
LINC00642-202ENST00000442515 KLHDC9Q8NEP7 349 aa16.97■□□□□ 0.31
LINC00642-202ENST00000442515 NKX2-4Q9H2Z4 354 aa16.97■□□□□ 0.31
LINC00642-202ENST00000442515 CNPY2Q9Y2B0 182 aa16.97■□□□□ 0.31
LINC00642-202ENST00000442515 DIS3Q9Y2L1 958 aaKnown RBP16.97■□□□□ 0.31
LINC00642-202ENST00000442515 HCN4Q9Y3Q4 1203 aa16.97■□□□□ 0.31
LINC00642-202ENST00000442515 MYADML2A6NDP7 307 aa16.96■□□□□ 0.31
LINC00642-202ENST00000442515 APBB1O00213 710 aa16.96■□□□□ 0.31
LINC00642-202ENST00000442515 POLR3DP05423 398 aaPredicted RBP16.96■□□□□ 0.31
LINC00642-202ENST00000442515 TFF2Q03403 129 aa16.96■□□□□ 0.31
LINC00642-202ENST00000442515 KCTD2Q14681 263 aa16.96■□□□□ 0.31
LINC00642-202ENST00000442515 KCNA10Q16322 511 aa16.96■□□□□ 0.31
LINC00642-202ENST00000442515 CLEC10AQ8IUN9 316 aa16.96■□□□□ 0.31
LINC00642-202ENST00000442515 MICALL1Q8N3F8 863 aa16.96■□□□□ 0.31
LINC00642-202ENST00000442515 TMEM199Q8N511 208 aa16.96■□□□□ 0.31
LINC00642-202ENST00000442515 PPP1R12CQ9BZL4 782 aa16.96■□□□□ 0.31
LINC00642-202ENST00000442515 TSPYL2Q9H2G4 693 aaPredicted RBP16.96■□□□□ 0.31
LINC00642-202ENST00000442515 YBX2Q9Y2T7 364 aaKnown RBP16.96■□□□□ 0.31
LINC00642-202ENST00000442515 ARIH1Q9Y4X5 557 aaPredicted RBP16.96■□□□□ 0.31
LINC00642-202ENST00000442515 GNAI2P04899 355 aa16.95■□□□□ 0.3
LINC00642-202ENST00000442515 RIOX2Q8IUF8 465 aa16.95■□□□□ 0.3
LINC00642-202ENST00000442515 GLT1D1Q96MS3 346 aa16.95■□□□□ 0.3
LINC00642-202ENST00000442515 RIOK1Q9BRS2 568 aaKnown RBP16.95■□□□□ 0.3
LINC00642-202ENST00000442515 SLC28A3Q9HAS3 691 aa16.95■□□□□ 0.3
LINC00642-202ENST00000442515 TLR7Q9NYK1 1049 aaKnown RBP16.95■□□□□ 0.3
LINC00642-202ENST00000442515 DBNLQ9UJU6 430 aaKnown RBP16.95■□□□□ 0.3
LINC00642-202ENST00000442515 ELP1O95163 1332 aa16.95■□□□□ 0.3
LINC00642-202ENST00000442515 CT47B1P0C2W7 299 aaPredicted RBP16.94■□□□□ 0.3
LINC00642-202ENST00000442515 CDK7P50613 346 aa16.94■□□□□ 0.3
LINC00642-202ENST00000442515 KCNQ1P51787 676 aa16.94■□□□□ 0.3
LINC00642-202ENST00000442515 TMEM179Q6ZVK1 233 aa16.94■□□□□ 0.3
LINC00642-202ENST00000442515 HERVK_113Q902F9 699 aa16.94■□□□□ 0.3
LINC00642-202ENST00000442515 LRFN3Q9BTN0 628 aa16.94■□□□□ 0.3
LINC00642-202ENST00000442515 WDR46O15213 610 aaKnown RBP16.93■□□□□ 0.3
LINC00642-202ENST00000442515 CST5P28325 142 aaPredicted RBP16.93■□□□□ 0.3
LINC00642-202ENST00000442515 IRX5P78411 483 aaPredicted RBP16.93■□□□□ 0.3
LINC00642-202ENST00000442515 ICA1Q05084 483 aa16.93■□□□□ 0.3
LINC00642-202ENST00000442515 OS9Q13438 667 aaPredicted RBP16.93■□□□□ 0.3
LINC00642-202ENST00000442515 SIAH1Q8IUQ4 282 aa16.93■□□□□ 0.3
LINC00642-202ENST00000442515 FAM126BQ8IXS8 530 aa16.93■□□□□ 0.3
LINC00642-202ENST00000442515 MTIF3Q9H2K0 278 aaKnown RBP16.93■□□□□ 0.3
LINC00642-202ENST00000442515 EPHX3Q9H6B9 360 aa16.93■□□□□ 0.3
LINC00642-202ENST00000442515 VCPKMTQ9H867 229 aa16.93■□□□□ 0.3
LINC00642-202ENST00000442515 IL23AQ9NPF7 189 aa16.93■□□□□ 0.3
LINC00642-202ENST00000442515 ZHX1Q9UKY1 873 aaPredicted RBP16.93■□□□□ 0.3
LINC00642-202ENST00000442515 FAM184BQ9ULE4 1060 aa16.93■□□□□ 0.3
LINC00642-202ENST00000442515 ADAMTS5Q9UNA0 930 aa16.93■□□□□ 0.3
LINC00642-202ENST00000442515 MYH1P12882 1939 aa16.93■□□□□ 0.3
LINC00642-202ENST00000442515 A0A0U1RQG5 324 aaPredicted RBP16.92■□□□□ 0.3
LINC00642-202ENST00000442515 ARVCFO00192 962 aa16.92■□□□□ 0.3
LINC00642-202ENST00000442515 DUSP11O75319 330 aaKnown RBP16.92■□□□□ 0.3
LINC00642-202ENST00000442515 AAK1Q2M2I8 961 aa16.92■□□□□ 0.3
LINC00642-202ENST00000442515 MSL3Q8N5Y2 521 aaKnown RBP16.92■□□□□ 0.3
LINC00642-202ENST00000442515 ANTXR1Q9H6X2 564 aa16.92■□□□□ 0.3
LINC00642-202ENST00000442515 SH2D4AQ9H788 454 aa16.92■□□□□ 0.3
LINC00642-202ENST00000442515 ARHGEF10LQ9HCE6 1279 aa16.92■□□□□ 0.3
LINC00642-202ENST00000442515 FBXO28Q9NVF7 368 aa16.92■□□□□ 0.3
LINC00642-202ENST00000442515 MCM9Q9NXL9 1143 aa16.92■□□□□ 0.3
LINC00642-202ENST00000442515 TMX2Q9Y320 296 aa16.92■□□□□ 0.3
LINC00642-202ENST00000442515 SMCHD1A6NHR9 2005 aa16.91■□□□□ 0.3
LINC00642-202ENST00000442515 PLXNA1Q9UIW2 1896 aa16.91■□□□□ 0.3
LINC00642-202ENST00000442515 SNAI1O95863 264 aaPredicted RBP16.91■□□□□ 0.3
LINC00642-202ENST00000442515 ASGR1P07306 291 aa16.91■□□□□ 0.3
LINC00642-202ENST00000442515 C6orf222P0C671 652 aaPredicted RBP16.91■□□□□ 0.3
LINC00642-202ENST00000442515 CYP2C18P33260 490 aa16.91■□□□□ 0.3
LINC00642-202ENST00000442515 STAT3P40763 770 aa16.91■□□□□ 0.3
LINC00642-202ENST00000442515 SKIV2LQ15477 1246 aaKnown RBP16.91■□□□□ 0.3
LINC00642-202ENST00000442515 PPP2R2DQ66LE6 453 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms