RNA–Protein interactions for RNA: ENST00000434734.1

HMGB3P10-201, Transcript of high mobility group box 3 pseudogene 10, humanhuman

BASIC

Gene HMGB3P10, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P10-201ENST00000434734 TIMMDC1Q9NPL8 285 aa6.49□□□□□ -1.37
HMGB3P10-201ENST00000434734 DDX21Q9NR30 783 aaKnown RBP eCLIP6.49□□□□□ -1.37
HMGB3P10-201ENST00000434734 SAP30BPQ9UHR5 308 aaKnown RBP6.49□□□□□ -1.37
HMGB3P10-201ENST00000434734 TNPO3Q9Y5L0 923 aaKnown RBP6.49□□□□□ -1.37
HMGB3P10-201ENST00000434734 A0A1B0GTH6 734 aa6.48□□□□□ -1.37
HMGB3P10-201ENST00000434734 A0A1W2PQU0 124 aa6.48□□□□□ -1.37
HMGB3P10-201ENST00000434734 IQCA1LA6NCM1 817 aa6.48□□□□□ -1.37
HMGB3P10-201ENST00000434734 METTL12A8MUP2 240 aa6.48□□□□□ -1.37
HMGB3P10-201ENST00000434734 M0R2C6 588 aa6.48□□□□□ -1.37
HMGB3P10-201ENST00000434734 FZD9O00144 591 aa6.48□□□□□ -1.37
HMGB3P10-201ENST00000434734 FIBPO43427 364 aa6.48□□□□□ -1.37
HMGB3P10-201ENST00000434734 ASGR2P07307 311 aa6.48□□□□□ -1.37
HMGB3P10-201ENST00000434734 MYBL2P10244 700 aa6.48□□□□□ -1.37
HMGB3P10-201ENST00000434734 BPIP17213 487 aa6.48□□□□□ -1.37
HMGB3P10-201ENST00000434734 POU3F2P20265 443 aaPredicted RBP6.48□□□□□ -1.37
HMGB3P10-201ENST00000434734 PLA2G4AP47712 749 aa6.48□□□□□ -1.37
HMGB3P10-201ENST00000434734 GJA9P57773 515 aa6.48□□□□□ -1.37
HMGB3P10-201ENST00000434734 SRSF11Q05519 484 aaKnown RBP6.48□□□□□ -1.37
HMGB3P10-201ENST00000434734 LBRQ14739 615 aaKnown RBP6.48□□□□□ -1.37
HMGB3P10-201ENST00000434734 KRT72Q14CN4 511 aa6.48□□□□□ -1.37
HMGB3P10-201ENST00000434734 NCAPHQ15003 741 aa6.48□□□□□ -1.37
HMGB3P10-201ENST00000434734 SPRED3Q2MJR0 410 aa6.48□□□□□ -1.37
HMGB3P10-201ENST00000434734 RNFT1Q5M7Z0 435 aa6.48□□□□□ -1.37
HMGB3P10-201ENST00000434734 GPR158Q5T848 1215 aa6.48□□□□□ -1.37
HMGB3P10-201ENST00000434734 PPP4R3AQ6IN85 833 aa6.48□□□□□ -1.37
HMGB3P10-201ENST00000434734 TMEM214Q6NUQ4 689 aaKnown RBP6.48□□□□□ -1.37
HMGB3P10-201ENST00000434734 KIAA1211LQ6NV74 962 aa6.48□□□□□ -1.37
HMGB3P10-201ENST00000434734 RIPOR1Q6ZS17 1223 aa6.48□□□□□ -1.37
HMGB3P10-201ENST00000434734 BRAPQ7Z569 592 aa6.48□□□□□ -1.37
HMGB3P10-201ENST00000434734 FGD2Q7Z6J4 655 aa6.48□□□□□ -1.37
HMGB3P10-201ENST00000434734 AHI1Q8N157 1196 aa6.48□□□□□ -1.37
HMGB3P10-201ENST00000434734 SLC7A14Q8TBB6 771 aa6.48□□□□□ -1.37
HMGB3P10-201ENST00000434734 KLHL6Q8WZ60 621 aa6.48□□□□□ -1.37
HMGB3P10-201ENST00000434734 TTC1Q99614 292 aa6.48□□□□□ -1.37
HMGB3P10-201ENST00000434734 NAA15Q9BXJ9 866 aaKnown RBP6.48□□□□□ -1.37
HMGB3P10-201ENST00000434734 ALDH8A1Q9H2A2 487 aaPredicted RBP6.48□□□□□ -1.37
HMGB3P10-201ENST00000434734 EFCC1Q9HA90 598 aa6.48□□□□□ -1.37
HMGB3P10-201ENST00000434734 NLRC4Q9NPP4 1024 aa6.48□□□□□ -1.37
HMGB3P10-201ENST00000434734 PNMA8BQ9ULN7 279 aaPredicted RBP6.48□□□□□ -1.37
HMGB3P10-201ENST00000434734 FRMD4BQ9Y2L6 1034 aa6.48□□□□□ -1.37
HMGB3P10-201ENST00000434734 A6NCN8 305 aa6.47□□□□□ -1.37
HMGB3P10-201ENST00000434734 FAM86C2PA6NEL3 165 aa6.47□□□□□ -1.37
HMGB3P10-201ENST00000434734 XYLBO75191 536 aa6.47□□□□□ -1.37
HMGB3P10-201ENST00000434734 TRPA1O75762 1119 aa6.47□□□□□ -1.37
HMGB3P10-201ENST00000434734 ZRANB2O95218 330 aaKnown RBP eCLIP6.47□□□□□ -1.37
HMGB3P10-201ENST00000434734 PTMAP06454 111 aaKnown RBP6.47□□□□□ -1.37
HMGB3P10-201ENST00000434734 ACRP10323 421 aa6.47□□□□□ -1.37
HMGB3P10-201ENST00000434734 EDN3P14138 238 aa6.47□□□□□ -1.37
HMGB3P10-201ENST00000434734 TRIM14Q14142 442 aa6.47□□□□□ -1.37
HMGB3P10-201ENST00000434734 ELF2Q15723 593 aa6.47□□□□□ -1.37
HMGB3P10-201ENST00000434734 DBN1Q16643 649 aa6.47□□□□□ -1.37
HMGB3P10-201ENST00000434734 ATP13A4Q4VNC1 1196 aa6.47□□□□□ -1.37
HMGB3P10-201ENST00000434734 HEATR6Q6AI08 1181 aaKnown RBP6.47□□□□□ -1.37
HMGB3P10-201ENST00000434734 MZT2AQ6P582 158 aa6.47□□□□□ -1.37
HMGB3P10-201ENST00000434734 CFAP161Q6P656 301 aa6.47□□□□□ -1.37
HMGB3P10-201ENST00000434734 UNC5AQ6ZN44 842 aa6.47□□□□□ -1.37
HMGB3P10-201ENST00000434734 BTLAQ7Z6A9 289 aa6.47□□□□□ -1.37
HMGB3P10-201ENST00000434734 CCNJLQ8IV13 435 aa6.47□□□□□ -1.37
HMGB3P10-201ENST00000434734 CPA6Q8N4T0 437 aa6.47□□□□□ -1.37
HMGB3P10-201ENST00000434734 RHBDD1Q8TEB9 315 aa6.47□□□□□ -1.37
HMGB3P10-201ENST00000434734 USP7Q93009 1102 aa6.47□□□□□ -1.37
HMGB3P10-201ENST00000434734 SECISBP2LQ93073 1101 aaKnown RBP6.47□□□□□ -1.37
HMGB3P10-201ENST00000434734 FUBP3Q96I24 572 aaKnown RBP eCLIP6.47□□□□□ -1.37
HMGB3P10-201ENST00000434734 TRERF1Q96PN7 1200 aa6.47□□□□□ -1.37
HMGB3P10-201ENST00000434734 SERINC2Q96SA4 455 aa6.47□□□□□ -1.37
HMGB3P10-201ENST00000434734 GAS2L1Q99501 681 aaPredicted RBP6.47□□□□□ -1.37
HMGB3P10-201ENST00000434734 TCF7L1Q9HCS4 588 aa6.47□□□□□ -1.37
HMGB3P10-201ENST00000434734 RCAN3Q9UKA8 241 aa6.47□□□□□ -1.37
HMGB3P10-201ENST00000434734 A0A087WZG4 1122 aa6.46□□□□□ -1.38
HMGB3P10-201ENST00000434734 TRAV20A0A0B4J274 112 aa6.46□□□□□ -1.38
HMGB3P10-201ENST00000434734 A6NNZ2 444 aa6.46□□□□□ -1.38
HMGB3P10-201ENST00000434734 SNUPNO95149 360 aaKnown RBP6.46□□□□□ -1.38
HMGB3P10-201ENST00000434734 NPTXRO95502 500 aa6.46□□□□□ -1.38
HMGB3P10-201ENST00000434734 SETSIPP0DME0 302 aa6.46□□□□□ -1.38
HMGB3P10-201ENST00000434734 U2AF1L5P0DN76 240 aaPredicted RBP6.46□□□□□ -1.38
HMGB3P10-201ENST00000434734 ALDH5A1P51649 535 aaPredicted RBP6.46□□□□□ -1.38
HMGB3P10-201ENST00000434734 U2AF1Q01081 240 aaKnown RBP eCLIP6.46□□□□□ -1.38
HMGB3P10-201ENST00000434734 DDX10Q13206 875 aaKnown RBP6.46□□□□□ -1.38
HMGB3P10-201ENST00000434734 PCBP2Q15366 365 aaKnown RBP eCLIP6.46□□□□□ -1.38
HMGB3P10-201ENST00000434734 LDHAL6AQ6ZMR3 332 aa6.46□□□□□ -1.38
HMGB3P10-201ENST00000434734 RASSF3Q86WH2 238 aa6.46□□□□□ -1.38
HMGB3P10-201ENST00000434734 FAM186BQ8IYM0 893 aa6.46□□□□□ -1.38
HMGB3P10-201ENST00000434734 GAL3ST3Q96A11 431 aa6.46□□□□□ -1.38
HMGB3P10-201ENST00000434734 TM9SF2Q99805 663 aa6.46□□□□□ -1.38
HMGB3P10-201ENST00000434734 ZKSCAN3Q9BRR0 538 aa6.46□□□□□ -1.38
HMGB3P10-201ENST00000434734 EPN3Q9H201 632 aa6.46□□□□□ -1.38
HMGB3P10-201ENST00000434734 IFT22Q9H7X7 185 aa6.46□□□□□ -1.38
HMGB3P10-201ENST00000434734 VTA1Q9NP79 307 aa6.46□□□□□ -1.38
HMGB3P10-201ENST00000434734 MAN1C1Q9NR34 630 aa6.46□□□□□ -1.38
HMGB3P10-201ENST00000434734 GPN3Q9UHW5 284 aaPredicted RBP6.46□□□□□ -1.38
HMGB3P10-201ENST00000434734 ANKRD6Q9Y2G4 727 aa6.46□□□□□ -1.38
HMGB3P10-201ENST00000434734 GJA3Q9Y6H8 435 aa6.46□□□□□ -1.38
HMGB3P10-201ENST00000434734 MEIS3P2A8K0S8 358 aa6.45□□□□□ -1.38
HMGB3P10-201ENST00000434734 ATE1O95260 518 aa6.45□□□□□ -1.38
HMGB3P10-201ENST00000434734 PYGMP11217 842 aa6.45□□□□□ -1.38
HMGB3P10-201ENST00000434734 SLC5A1P13866 664 aa6.45□□□□□ -1.38
HMGB3P10-201ENST00000434734 LMNB1P20700 586 aa6.45□□□□□ -1.38
HMGB3P10-201ENST00000434734 POLD1P28340 1107 aa6.45□□□□□ -1.38
HMGB3P10-201ENST00000434734 ZNF157P51786 506 aaPredicted RBP6.45□□□□□ -1.38
HMGB3P10-201ENST00000434734 USP14P54578 494 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms