RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 SIAH1Q8IUQ4 282 aa6.86□□□□□ -1.31
HMGB3P24-201ENST00000433260 SPICE1Q8N0Z3 855 aa6.86□□□□□ -1.31
HMGB3P24-201ENST00000433260 ANKRD13CQ8N6S4 541 aa6.86□□□□□ -1.31
HMGB3P24-201ENST00000433260 PROCA1Q8NCQ7 364 aaPredicted RBP6.86□□□□□ -1.31
HMGB3P24-201ENST00000433260 SMCR8Q8TEV9 937 aaPredicted RBP6.86□□□□□ -1.31
HMGB3P24-201ENST00000433260 ERO1AQ96HE7 468 aa6.86□□□□□ -1.31
HMGB3P24-201ENST00000433260 CCDC17Q96LX7 622 aa6.86□□□□□ -1.31
HMGB3P24-201ENST00000433260 PARK7Q99497 189 aaKnown RBP6.86□□□□□ -1.31
HMGB3P24-201ENST00000433260 CFHR5Q9BXR6 569 aa6.86□□□□□ -1.31
HMGB3P24-201ENST00000433260 GINM1Q9NU53 330 aa6.86□□□□□ -1.31
HMGB3P24-201ENST00000433260 CLIP2Q9UDT6 1046 aa6.86□□□□□ -1.31
HMGB3P24-201ENST00000433260 TACC3Q9Y6A5 838 aa6.86□□□□□ -1.31
HMGB3P24-201ENST00000433260 ZNF213O14771 459 aa6.85□□□□□ -1.31
HMGB3P24-201ENST00000433260 RANBP6O60518 1105 aaKnown RBP6.85□□□□□ -1.31
HMGB3P24-201ENST00000433260 FMNL1O95466 1100 aaPredicted RBP6.85□□□□□ -1.31
HMGB3P24-201ENST00000433260 MYCP01106 439 aaPredicted RBP6.85□□□□□ -1.31
HMGB3P24-201ENST00000433260 TSPY3P0CV98 308 aa6.85□□□□□ -1.31
HMGB3P24-201ENST00000433260 TSPY8P0CW00 308 aa6.85□□□□□ -1.31
HMGB3P24-201ENST00000433260 CHMLP26374 656 aa6.85□□□□□ -1.31
HMGB3P24-201ENST00000433260 CTGFP29279 349 aa6.85□□□□□ -1.31
HMGB3P24-201ENST00000433260 PSMC4P43686 418 aa6.85□□□□□ -1.31
HMGB3P24-201ENST00000433260 USP14P54578 494 aa6.85□□□□□ -1.31
HMGB3P24-201ENST00000433260 MFAP1P55081 439 aaKnown RBP6.85□□□□□ -1.31
HMGB3P24-201ENST00000433260 IRX3P78415 501 aaPredicted RBP6.85□□□□□ -1.31
HMGB3P24-201ENST00000433260 ICA1Q05084 483 aa6.85□□□□□ -1.31
HMGB3P24-201ENST00000433260 PABPC4Q13310 644 aaKnown RBP eCLIP6.85□□□□□ -1.31
HMGB3P24-201ENST00000433260 Q3C1V9 767 aa6.85□□□□□ -1.31
HMGB3P24-201ENST00000433260 KIAA1755Q5JYT7 1200 aa6.85□□□□□ -1.31
HMGB3P24-201ENST00000433260 VARS2Q5ST30 1063 aaKnown RBP6.85□□□□□ -1.31
HMGB3P24-201ENST00000433260 OTOP1Q7RTM1 612 aa6.85□□□□□ -1.31
HMGB3P24-201ENST00000433260 ABHD8Q96I13 439 aa6.85□□□□□ -1.31
HMGB3P24-201ENST00000433260 PAGR1Q9BTK6 254 aa6.85□□□□□ -1.31
HMGB3P24-201ENST00000433260 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.85□□□□□ -1.31
HMGB3P24-201ENST00000433260 ASCC2Q9H1I8 757 aaPredicted RBP6.85□□□□□ -1.31
HMGB3P24-201ENST00000433260 IL25Q9H293 177 aa6.85□□□□□ -1.31
HMGB3P24-201ENST00000433260 RPAP3Q9H6T3 665 aaPredicted RBP6.85□□□□□ -1.31
HMGB3P24-201ENST00000433260 KANSL2Q9H9L4 492 aa6.85□□□□□ -1.31
HMGB3P24-201ENST00000433260 EFCC1Q9HA90 598 aa6.85□□□□□ -1.31
HMGB3P24-201ENST00000433260 ZNF287Q9HBT7 754 aa6.85□□□□□ -1.31
HMGB3P24-201ENST00000433260 ARHGEF10LQ9HCE6 1279 aa6.85□□□□□ -1.31
HMGB3P24-201ENST00000433260 ZCCHC17Q9NP64 241 aaKnown RBP6.85□□□□□ -1.31
HMGB3P24-201ENST00000433260 NPDC1Q9NQX5 325 aaPredicted RBP6.85□□□□□ -1.31
HMGB3P24-201ENST00000433260 PPP4R2Q9NY27 417 aa6.85□□□□□ -1.31
HMGB3P24-201ENST00000433260 RBM27Q9P2N5 1060 aaKnown RBP6.85□□□□□ -1.31
HMGB3P24-201ENST00000433260 MGAMO43451 1857 aa6.85□□□□□ -1.31
HMGB3P24-201ENST00000433260 MYH4Q9Y623 1939 aa6.84□□□□□ -1.31
HMGB3P24-201ENST00000433260 TSPY2A6NKD2 308 aa6.84□□□□□ -1.31
HMGB3P24-201ENST00000433260 PPP1R3GB7ZBB8 358 aa6.84□□□□□ -1.31
HMGB3P24-201ENST00000433260 USP17L15C9J2P7 530 aa6.84□□□□□ -1.31
HMGB3P24-201ENST00000433260 USP17L13C9JLJ4 530 aa6.84□□□□□ -1.31
HMGB3P24-201ENST00000433260 USP17L11C9JVI0 530 aa6.84□□□□□ -1.31
HMGB3P24-201ENST00000433260 USP17L18D6R9N7 530 aa6.84□□□□□ -1.31
HMGB3P24-201ENST00000433260 USP17L22D6RA61 530 aa6.84□□□□□ -1.31
HMGB3P24-201ENST00000433260 USP17L17D6RBQ6 530 aa6.84□□□□□ -1.31
HMGB3P24-201ENST00000433260 USP17L19D6RCP7 530 aa6.84□□□□□ -1.31
HMGB3P24-201ENST00000433260 USP17L20D6RJB6 530 aa6.84□□□□□ -1.31
HMGB3P24-201ENST00000433260 NMT2O60551 498 aa6.84□□□□□ -1.31
HMGB3P24-201ENST00000433260 HOXA7P31268 230 aaPredicted RBP6.84□□□□□ -1.31
HMGB3P24-201ENST00000433260 LACTBP83111 547 aaPredicted RBP6.84□□□□□ -1.31
HMGB3P24-201ENST00000433260 PTH1RQ03431 593 aa6.84□□□□□ -1.31
HMGB3P24-201ENST00000433260 USP17L24Q0WX57 530 aa6.84□□□□□ -1.31
HMGB3P24-201ENST00000433260 ALX1Q15699 326 aa6.84□□□□□ -1.31
HMGB3P24-201ENST00000433260 NOM1Q5C9Z4 860 aaKnown RBP6.84□□□□□ -1.31
HMGB3P24-201ENST00000433260 CATSPERGQ6ZRH7 1159 aa6.84□□□□□ -1.31
HMGB3P24-201ENST00000433260 MFSD6Q6ZSS7 791 aa6.84□□□□□ -1.31
HMGB3P24-201ENST00000433260 TICAM2Q86XR7 235 aa6.84□□□□□ -1.31
HMGB3P24-201ENST00000433260 ZKSCAN3Q9BRR0 538 aa6.84□□□□□ -1.31
HMGB3P24-201ENST00000433260 TANGO6Q9C0B7 1094 aa6.84□□□□□ -1.31
HMGB3P24-201ENST00000433260 KIAA1683Q9H0B3 1180 aa6.84□□□□□ -1.31
HMGB3P24-201ENST00000433260 PNMA3Q9UL41 463 aa6.84□□□□□ -1.31
HMGB3P24-201ENST00000433260 MTMR7Q9Y216 660 aa6.84□□□□□ -1.31
HMGB3P24-201ENST00000433260 PTPN22Q9Y2R2 807 aa6.84□□□□□ -1.31
HMGB3P24-201ENST00000433260 SLC45A1Q9Y2W3 748 aa6.84□□□□□ -1.31
HMGB3P24-201ENST00000433260 LOC285556D6RIA3 1793 aa6.84□□□□□ -1.31
HMGB3P24-201ENST00000433260 F5H6K3 240 aa6.83□□□□□ -1.32
HMGB3P24-201ENST00000433260 BCRP11274 1271 aa6.83□□□□□ -1.32
HMGB3P24-201ENST00000433260 VCAM1P19320 739 aa6.83□□□□□ -1.32
HMGB3P24-201ENST00000433260 SLC4A3P48751 1232 aa6.83□□□□□ -1.32
HMGB3P24-201ENST00000433260 FCGRTP55899 365 aa6.83□□□□□ -1.32
HMGB3P24-201ENST00000433260 PRSS12P56730 875 aa6.83□□□□□ -1.32
HMGB3P24-201ENST00000433260 HERVK_113P62684 666 aa6.83□□□□□ -1.32
HMGB3P24-201ENST00000433260 KLRC3Q07444 240 aa6.83□□□□□ -1.32
HMGB3P24-201ENST00000433260 COG2Q14746 738 aa6.83□□□□□ -1.32
HMGB3P24-201ENST00000433260 ARHGEF6Q15052 776 aa6.83□□□□□ -1.32
HMGB3P24-201ENST00000433260 WDR78Q5VTH9 848 aa6.83□□□□□ -1.32
HMGB3P24-201ENST00000433260 CCAR1Q8IX12 1150 aaKnown RBP6.83□□□□□ -1.32
HMGB3P24-201ENST00000433260 NEDD1Q8NHV4 660 aa6.83□□□□□ -1.32
HMGB3P24-201ENST00000433260 NKX2-3Q8TAU0 364 aa6.83□□□□□ -1.32
HMGB3P24-201ENST00000433260 RUFY2Q8WXA3 655 aa6.83□□□□□ -1.32
HMGB3P24-201ENST00000433260 CEP95Q96GE4 821 aa6.83□□□□□ -1.32
HMGB3P24-201ENST00000433260 TRIM47Q96LD4 638 aa6.83□□□□□ -1.32
HMGB3P24-201ENST00000433260 KCNK17Q96T54 332 aa6.83□□□□□ -1.32
HMGB3P24-201ENST00000433260 NUP88Q99567 741 aaPredicted RBP6.83□□□□□ -1.32
HMGB3P24-201ENST00000433260 VCPKMTQ9H867 229 aa6.83□□□□□ -1.32
HMGB3P24-201ENST00000433260 GOPCQ9HD26 462 aa6.83□□□□□ -1.32
HMGB3P24-201ENST00000433260 TXNRD2Q9NNW7 524 aa6.83□□□□□ -1.32
HMGB3P24-201ENST00000433260 IL17RBQ9NRM6 502 aa6.83□□□□□ -1.32
HMGB3P24-201ENST00000433260 RBPJLQ9UBG7 517 aa6.83□□□□□ -1.32
HMGB3P24-201ENST00000433260 ISY1Q9ULR0 285 aaKnown RBP6.83□□□□□ -1.32
HMGB3P24-201ENST00000433260 GABRQQ9UN88 632 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms