RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 CEP95Q96GE4 821 aa20.89■□□□□ 0.93
NUP50-208ENST00000430547 OSBPL3Q9H4L5 887 aa20.89■□□□□ 0.93
NUP50-208ENST00000430547 ZNFX1Q9P2E3 1918 aaKnown RBP20.88■□□□□ 0.93
NUP50-208ENST00000430547 PLIN4Q96Q06 1357 aa20.88■□□□□ 0.93
NUP50-208ENST00000430547 TTLL1O95922 423 aa20.88■□□□□ 0.93
NUP50-208ENST00000430547 ERCC3P19447 782 aa20.88■□□□□ 0.93
NUP50-208ENST00000430547 MFAP1P55081 439 aaKnown RBP20.88■□□□□ 0.93
NUP50-208ENST00000430547 NMIQ13287 307 aaPredicted RBP20.88■□□□□ 0.93
NUP50-208ENST00000430547 GRB14Q14449 540 aa20.88■□□□□ 0.93
NUP50-208ENST00000430547 VPS53Q5VIR6 699 aa20.88■□□□□ 0.93
NUP50-208ENST00000430547 NCAPG2Q86XI2 1143 aa20.88■□□□□ 0.93
NUP50-208ENST00000430547 NEDD1Q8NHV4 660 aa20.88■□□□□ 0.93
NUP50-208ENST00000430547 HTATIP2Q9BUP3 242 aa20.88■□□□□ 0.93
NUP50-208ENST00000430547 MROH8Q9H579 483 aa20.88■□□□□ 0.93
NUP50-208ENST00000430547 MTMR4Q9NYA4 1195 aa20.88■□□□□ 0.93
NUP50-208ENST00000430547 IGKV6D-41A0A0C4DH26 115 aa20.87■□□□□ 0.93
NUP50-208ENST00000430547 TSPY2A6NKD2 308 aa20.87■□□□□ 0.93
NUP50-208ENST00000430547 F5H6K3 240 aa20.87■□□□□ 0.93
NUP50-208ENST00000430547 FOXP2O15409 715 aa20.87■□□□□ 0.93
NUP50-208ENST00000430547 STRNO43815 780 aa20.87■□□□□ 0.93
NUP50-208ENST00000430547 TFAP4Q01664 338 aa20.87■□□□□ 0.93
NUP50-208ENST00000430547 CTDSPL2Q05D32 466 aa20.87■□□□□ 0.93
NUP50-208ENST00000430547 KLRC3Q07444 240 aa20.87■□□□□ 0.93
NUP50-208ENST00000430547 CCL14Q16627 93 aa20.87■□□□□ 0.93
NUP50-208ENST00000430547 FAM47AQ5JRC9 791 aa20.87■□□□□ 0.93
NUP50-208ENST00000430547 PPP4R3BQ5MIZ7 849 aa20.87■□□□□ 0.93
NUP50-208ENST00000430547 DPP9Q86TI2 863 aa20.87■□□□□ 0.93
NUP50-208ENST00000430547 FBXO28Q9NVF7 368 aa20.87■□□□□ 0.93
NUP50-208ENST00000430547 PPP1R9AQ9ULJ8 1098 aa20.87■□□□□ 0.93
NUP50-208ENST00000430547 SYNPO2Q9UMS6 1093 aa20.87■□□□□ 0.93
NUP50-208ENST00000430547 CCDC171Q6TFL3 1326 aa20.86■□□□□ 0.93
NUP50-208ENST00000430547 NDUFB10O96000 172 aa20.86■□□□□ 0.93
NUP50-208ENST00000430547 MFSD14CQ5VZR4 134 aa20.86■□□□□ 0.93
NUP50-208ENST00000430547 NUP88Q99567 741 aaPredicted RBP20.86■□□□□ 0.93
NUP50-208ENST00000430547 SLF1Q9BQI6 1058 aa20.86■□□□□ 0.93
NUP50-208ENST00000430547 DIAPH3Q9NSV4 1193 aa20.86■□□□□ 0.93
NUP50-208ENST00000430547 SLC5A4Q9NY91 659 aa20.86■□□□□ 0.93
NUP50-208ENST00000430547 FRMPD3Q5JV73 1810 aa20.85■□□□□ 0.93
NUP50-208ENST00000430547 SLC25A27O95847 323 aa20.85■□□□□ 0.93
NUP50-208ENST00000430547 SDSP20132 328 aa20.85■□□□□ 0.93
NUP50-208ENST00000430547 ADORA2AP29274 412 aa20.85■□□□□ 0.93
NUP50-208ENST00000430547 CACNB2Q08289 660 aaPredicted RBP20.85■□□□□ 0.93
NUP50-208ENST00000430547 TMEM132BQ14DG7 1078 aa20.85■□□□□ 0.93
NUP50-208ENST00000430547 ALX1Q15699 326 aa20.85■□□□□ 0.93
NUP50-208ENST00000430547 MAP3K21Q5TCX8 1036 aa20.85■□□□□ 0.93
NUP50-208ENST00000430547 LRRC47Q8N1G4 583 aaKnown RBP20.85■□□□□ 0.93
NUP50-208ENST00000430547 DPF3Q92784 378 aa20.85■□□□□ 0.93
NUP50-208ENST00000430547 MKL1Q969V6 931 aa20.85■□□□□ 0.93
NUP50-208ENST00000430547 CRISPLD2Q9H0B8 497 aa20.85■□□□□ 0.93
NUP50-208ENST00000430547 TOMM22Q9NS69 142 aa20.85■□□□□ 0.93
NUP50-208ENST00000430547 ANAPC4Q9UJX5 808 aa20.85■□□□□ 0.93
NUP50-208ENST00000430547 ISY1Q9ULR0 285 aaKnown RBP20.85■□□□□ 0.93
NUP50-208ENST00000430547 CTDP1Q9Y5B0 961 aaPredicted RBP20.85■□□□□ 0.93
NUP50-208ENST00000430547 PLXNA1Q9UIW2 1896 aa20.85■□□□□ 0.93
NUP50-208ENST00000430547 HIP1O00291 1037 aa20.84■□□□□ 0.93
NUP50-208ENST00000430547 VWA5AO00534 786 aa20.84■□□□□ 0.93
NUP50-208ENST00000430547 RANBP6O60518 1105 aaKnown RBP20.84■□□□□ 0.93
NUP50-208ENST00000430547 HOXC6P09630 235 aa20.84■□□□□ 0.93
NUP50-208ENST00000430547 HSPD1P10809 573 aaKnown RBP20.84■□□□□ 0.93
NUP50-208ENST00000430547 ZNF589Q86UQ0 364 aaPredicted RBP20.84■□□□□ 0.93
NUP50-208ENST00000430547 ADAMTS5Q9UNA0 930 aa20.84■□□□□ 0.93
NUP50-208ENST00000430547 STX8Q9UNK0 236 aa20.84■□□□□ 0.93
NUP50-208ENST00000430547 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.84■□□□□ 0.93
NUP50-208ENST00000430547 LAMA4Q16363 1823 aa20.83■□□□□ 0.93
NUP50-208ENST00000430547 ZMYM6O95789 1325 aa20.83■□□□□ 0.93
NUP50-208ENST00000430547 FGAP02671 866 aa20.83■□□□□ 0.93
NUP50-208ENST00000430547 FCER1AP12319 257 aa20.83■□□□□ 0.93
NUP50-208ENST00000430547 COPB2P35606 906 aa20.83■□□□□ 0.93
NUP50-208ENST00000430547 UBE2Q1Q7Z7E8 422 aa20.83■□□□□ 0.93
NUP50-208ENST00000430547 ABRAQ8N0Z2 381 aa20.83■□□□□ 0.93
NUP50-208ENST00000430547 ANKLE1Q8NAG6 615 aa20.83■□□□□ 0.93
NUP50-208ENST00000430547 PRPF38AQ8NAV1 312 aaKnown RBP20.83■□□□□ 0.93
NUP50-208ENST00000430547 GMCL1P1Q8NEA9 526 aa20.83■□□□□ 0.93
NUP50-208ENST00000430547 STAT3P40763 770 aa20.82■□□□□ 0.92
NUP50-208ENST00000430547 SLFN13Q68D06 897 aa20.82■□□□□ 0.92
NUP50-208ENST00000430547 CWC27Q6UX04 472 aaKnown RBP20.82■□□□□ 0.92
NUP50-208ENST00000430547 RIOX2Q8IUF8 465 aa20.82■□□□□ 0.92
NUP50-208ENST00000430547 NPLOC4Q8TAT6 608 aa20.82■□□□□ 0.92
NUP50-208ENST00000430547 FLRT1Q9NZU1 646 aa20.82■□□□□ 0.92
NUP50-208ENST00000430547 ORC4O43929 436 aa20.81■□□□□ 0.92
NUP50-208ENST00000430547 ZBED4O75132 1171 aa20.81■□□□□ 0.92
NUP50-208ENST00000430547 CCND3P30281 292 aaPredicted RBP20.81■□□□□ 0.92
NUP50-208ENST00000430547 KCTD2Q14681 263 aa20.81■□□□□ 0.92
NUP50-208ENST00000430547 RRP12Q5JTH9 1297 aaKnown RBP20.81■□□□□ 0.92
NUP50-208ENST00000430547 NECAB2Q7Z6G3 386 aa20.81■□□□□ 0.92
NUP50-208ENST00000430547 KIFC2Q96AC6 838 aa20.81■□□□□ 0.92
NUP50-208ENST00000430547 PAWRQ96IZ0 340 aaKnown RBP20.81■□□□□ 0.92
NUP50-208ENST00000430547 MMP19Q99542 508 aa20.81■□□□□ 0.92
NUP50-208ENST00000430547 INCENPQ9NQS7 918 aa20.81■□□□□ 0.92
NUP50-208ENST00000430547 FEM1BQ9UK73 627 aa20.81■□□□□ 0.92
NUP50-208ENST00000430547 ZNF214Q9UL59 606 aaPredicted RBP20.81■□□□□ 0.92
NUP50-208ENST00000430547 BMP3P12645 472 aa20.8■□□□□ 0.92
NUP50-208ENST00000430547 CNGA1P29973 690 aa20.8■□□□□ 0.92
NUP50-208ENST00000430547 IKQ13123 557 aaPredicted RBP20.8■□□□□ 0.92
NUP50-208ENST00000430547 TEX13BQ9BXU2 312 aa20.8■□□□□ 0.92
NUP50-208ENST00000430547 OGDHLQ9ULD0 1010 aa20.8■□□□□ 0.92
NUP50-208ENST00000430547 CYP2C19P33261 490 aa20.79■□□□□ 0.92
NUP50-208ENST00000430547 SLC1A4P43007 532 aa20.79■□□□□ 0.92
NUP50-208ENST00000430547 SLC4A3P48751 1232 aa20.79■□□□□ 0.92
NUP50-208ENST00000430547 HAND2P61296 217 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms