RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 CEMIPQ8WUJ3 1361 aa12.66□□□□□ -0.38
SEC61A1-202ENST00000424880 LAMA4Q16363 1823 aa12.66□□□□□ -0.38
SEC61A1-202ENST00000424880 TTC26A0AVF1 554 aa12.66□□□□□ -0.38
SEC61A1-202ENST00000424880 CHUKO15111 745 aa12.66□□□□□ -0.38
SEC61A1-202ENST00000424880 CSB-PGBD3P0DP91 1061 aa12.66□□□□□ -0.38
SEC61A1-202ENST00000424880 KLK7P49862 253 aa12.66□□□□□ -0.38
SEC61A1-202ENST00000424880 TUBB2AQ13885 445 aa12.66□□□□□ -0.38
SEC61A1-202ENST00000424880 LRRC24Q50LG9 513 aa12.66□□□□□ -0.38
SEC61A1-202ENST00000424880 ZMYM1Q5SVZ6 1142 aa12.66□□□□□ -0.38
SEC61A1-202ENST00000424880 CYP26C1Q6V0L0 522 aa12.66□□□□□ -0.38
SEC61A1-202ENST00000424880 XAGE2Q96GT9 111 aa12.66□□□□□ -0.38
SEC61A1-202ENST00000424880 TUBB2BQ9BVA1 445 aa12.66□□□□□ -0.38
SEC61A1-202ENST00000424880 SLC40A1Q9NP59 571 aa12.66□□□□□ -0.38
SEC61A1-202ENST00000424880 EME2A4GXA9 379 aaPredicted RBP12.65□□□□□ -0.38
SEC61A1-202ENST00000424880 FAM153BP0C7A2 387 aa12.65□□□□□ -0.38
SEC61A1-202ENST00000424880 HERVK_113P62684 666 aa12.65□□□□□ -0.38
SEC61A1-202ENST00000424880 FAM153CQ494X1 144 aa12.65□□□□□ -0.38
SEC61A1-202ENST00000424880 FAM228AQ86W67 206 aa12.65□□□□□ -0.38
SEC61A1-202ENST00000424880 TMTC1Q8IUR5 882 aa12.65□□□□□ -0.38
SEC61A1-202ENST00000424880 CCDC114Q96M63 670 aa12.65□□□□□ -0.38
SEC61A1-202ENST00000424880 ZIM3Q96PE6 472 aa12.65□□□□□ -0.38
SEC61A1-202ENST00000424880 CABP5Q9NP86 173 aa12.65□□□□□ -0.38
SEC61A1-202ENST00000424880 FAM153AQ9UHL3 310 aa12.65□□□□□ -0.38
SEC61A1-202ENST00000424880 COL16A1Q07092 1604 aaPredicted RBP12.65□□□□□ -0.38
SEC61A1-202ENST00000424880 TRIM49BA6NDI0 452 aa12.65□□□□□ -0.38
SEC61A1-202ENST00000424880 LSP1P33241 339 aa12.65□□□□□ -0.38
SEC61A1-202ENST00000424880 CDR1P51861 262 aa12.65□□□□□ -0.38
SEC61A1-202ENST00000424880 NEXNQ0ZGT2 675 aa12.65□□□□□ -0.38
SEC61A1-202ENST00000424880 ACCSLQ4AC99 568 aa12.65□□□□□ -0.38
SEC61A1-202ENST00000424880 SPATA1Q5VX52 437 aa12.65□□□□□ -0.38
SEC61A1-202ENST00000424880 NAA15Q9BXJ9 866 aaKnown RBP12.65□□□□□ -0.38
SEC61A1-202ENST00000424880 PHLPP1O60346 1717 aa12.65□□□□□ -0.38
SEC61A1-202ENST00000424880 ALS2Q96Q42 1657 aa12.65□□□□□ -0.39
SEC61A1-202ENST00000424880 A0A087WZG4 1122 aa12.64□□□□□ -0.39
SEC61A1-202ENST00000424880 KLHL33A6NCF5 533 aa12.64□□□□□ -0.39
SEC61A1-202ENST00000424880 NCK2O43639 380 aa12.64□□□□□ -0.39
SEC61A1-202ENST00000424880 PBX1P40424 430 aa12.64□□□□□ -0.39
SEC61A1-202ENST00000424880 IARSP41252 1262 aaKnown RBP12.64□□□□□ -0.39
SEC61A1-202ENST00000424880 SARSP49591 514 aaKnown RBP12.64□□□□□ -0.39
SEC61A1-202ENST00000424880 TMED8Q6PL24 325 aaPredicted RBP12.64□□□□□ -0.39
SEC61A1-202ENST00000424880 CADPS2Q86UW7 1296 aa12.64□□□□□ -0.39
SEC61A1-202ENST00000424880 DIS3L2Q8IYB7 885 aaKnown RBP12.64□□□□□ -0.39
SEC61A1-202ENST00000424880 SH3GL2Q99962 352 aa12.64□□□□□ -0.39
SEC61A1-202ENST00000424880 AGPAT5Q9NUQ2 364 aa12.64□□□□□ -0.39
SEC61A1-202ENST00000424880 ZNF213O14771 459 aa12.64□□□□□ -0.39
SEC61A1-202ENST00000424880 PUS3Q9BZE2 481 aaKnown RBP12.64□□□□□ -0.39
SEC61A1-202ENST00000424880 PXDNQ92626 1479 aa12.64□□□□□ -0.39
SEC61A1-202ENST00000424880 RGPD5Q99666 1765 aa12.64□□□□□ -0.39
SEC61A1-202ENST00000424880 KIF1AQ12756 1690 aa12.64□□□□□ -0.39
SEC61A1-202ENST00000424880 RNF113AO15541 343 aaKnown RBP12.64□□□□□ -0.39
SEC61A1-202ENST00000424880 ACTN4O43707 911 aaKnown RBP12.64□□□□□ -0.39
SEC61A1-202ENST00000424880 NCAPD2Q15021 1401 aa12.64□□□□□ -0.39
SEC61A1-202ENST00000424880 MB21D2Q8IYB1 491 aaPredicted RBP12.64□□□□□ -0.39
SEC61A1-202ENST00000424880 NCOA7Q8NI08 942 aa12.64□□□□□ -0.39
SEC61A1-202ENST00000424880 ZNF473Q8WTR7 871 aaKnown RBP12.64□□□□□ -0.39
SEC61A1-202ENST00000424880 THOC1Q96FV9 657 aaKnown RBP12.64□□□□□ -0.39
SEC61A1-202ENST00000424880 MS4A14Q96JA4 679 aa12.64□□□□□ -0.39
SEC61A1-202ENST00000424880 FBXO2Q9UK22 296 aaPredicted RBP12.64□□□□□ -0.39
SEC61A1-202ENST00000424880 FAM184BQ9ULE4 1060 aa12.64□□□□□ -0.39
SEC61A1-202ENST00000424880 SH3TC1Q8TE82 1336 aa12.63□□□□□ -0.39
SEC61A1-202ENST00000424880 TMCO5BA8MYB1 307 aa12.63□□□□□ -0.39
SEC61A1-202ENST00000424880 IRF6O14896 467 aa12.63□□□□□ -0.39
SEC61A1-202ENST00000424880 RFX5P48382 616 aaPredicted RBP12.63□□□□□ -0.39
SEC61A1-202ENST00000424880 NAP1L1P55209 391 aaKnown RBP12.63□□□□□ -0.39
SEC61A1-202ENST00000424880 SCARF1Q14162 830 aa12.63□□□□□ -0.39
SEC61A1-202ENST00000424880 RRAGBQ5VZM2 374 aa12.63□□□□□ -0.39
SEC61A1-202ENST00000424880 NFRKBQ6P4R8 1299 aa12.63□□□□□ -0.39
SEC61A1-202ENST00000424880 CCDC43Q96MW1 224 aaKnown RBP12.63□□□□□ -0.39
SEC61A1-202ENST00000424880 CCT8L2Q96SF2 557 aa12.63□□□□□ -0.39
SEC61A1-202ENST00000424880 DACH1Q9UI36 760 aa12.63□□□□□ -0.39
SEC61A1-202ENST00000424880 UBN2Q6ZU65 1347 aa12.63□□□□□ -0.39
SEC61A1-202ENST00000424880 WNT7AO00755 349 aa12.63□□□□□ -0.39
SEC61A1-202ENST00000424880 PLEKP08567 350 aaPredicted RBP12.63□□□□□ -0.39
SEC61A1-202ENST00000424880 PREPLQ4J6C6 727 aaPredicted RBP12.63□□□□□ -0.39
SEC61A1-202ENST00000424880 RRP12Q5JTH9 1297 aaKnown RBP12.63□□□□□ -0.39
SEC61A1-202ENST00000424880 NBPF14Q5TI25 921 aa12.63□□□□□ -0.39
SEC61A1-202ENST00000424880 OR2W6PQ8NHA6 318 aa12.63□□□□□ -0.39
SEC61A1-202ENST00000424880 AENQ8WTP8 325 aaKnown RBP12.63□□□□□ -0.39
SEC61A1-202ENST00000424880 HELLSQ9NRZ9 838 aa12.63□□□□□ -0.39
SEC61A1-202ENST00000424880 NFU1Q9UMS0 254 aa12.63□□□□□ -0.39
SEC61A1-202ENST00000424880 ENO4A6NNW6 628 aa12.62□□□□□ -0.39
SEC61A1-202ENST00000424880 DNM1LO00429 736 aa12.62□□□□□ -0.39
SEC61A1-202ENST00000424880 TMOD1P28289 359 aa12.62□□□□□ -0.39
SEC61A1-202ENST00000424880 PTPROQ16827 1216 aa12.62□□□□□ -0.39
SEC61A1-202ENST00000424880 ARMC3Q5W041 872 aa12.62□□□□□ -0.39
SEC61A1-202ENST00000424880 NOSTRINQ8IVI9 506 aa12.62□□□□□ -0.39
SEC61A1-202ENST00000424880 AMOTL1Q8IY63 956 aa12.62□□□□□ -0.39
SEC61A1-202ENST00000424880 MLXIPQ9HAP2 919 aa12.62□□□□□ -0.39
SEC61A1-202ENST00000424880 DDX58O95786 925 aaKnown RBP12.62□□□□□ -0.39
SEC61A1-202ENST00000424880 ADORA1P30542 326 aa12.62□□□□□ -0.39
SEC61A1-202ENST00000424880 GBP2P32456 591 aaPredicted RBP12.62□□□□□ -0.39
SEC61A1-202ENST00000424880 MRPL12P52815 198 aaKnown RBP12.62□□□□□ -0.39
SEC61A1-202ENST00000424880 IRX1P78414 480 aaPredicted RBP12.62□□□□□ -0.39
SEC61A1-202ENST00000424880 CHRNA2Q15822 529 aa12.62□□□□□ -0.39
SEC61A1-202ENST00000424880 B4GALNT4Q76KP1 1039 aa12.62□□□□□ -0.39
SEC61A1-202ENST00000424880 FAM170AA1A519 330 aa12.62□□□□□ -0.39
SEC61A1-202ENST00000424880 PPP1R3GB7ZBB8 358 aa12.62□□□□□ -0.39
SEC61A1-202ENST00000424880 HSF2BPO75031 334 aa12.62□□□□□ -0.39
SEC61A1-202ENST00000424880 FSBPO95073 299 aa12.62□□□□□ -0.39
SEC61A1-202ENST00000424880 GCFC2P16383 781 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms