RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 SLC25A27O95847 323 aa19.36■□□□□ 0.69
COL18A1-205ENST00000423214 FCER1AP12319 257 aa19.36■□□□□ 0.69
COL18A1-205ENST00000423214 ATN1P54259 1190 aaPredicted RBP19.36■□□□□ 0.69
COL18A1-205ENST00000423214 SIAH1Q8IUQ4 282 aa19.36■□□□□ 0.69
COL18A1-205ENST00000423214 PRKAG2Q9UGJ0 569 aa19.36■□□□□ 0.69
COL18A1-205ENST00000423214 ROBO3Q96MS0 1386 aa19.35■□□□□ 0.69
COL18A1-205ENST00000423214 MYCNP04198 464 aaPredicted RBP19.35■□□□□ 0.69
COL18A1-205ENST00000423214 MDM2Q00987 491 aaPredicted RBP19.35■□□□□ 0.69
COL18A1-205ENST00000423214 LRIT3Q3SXY7 679 aa19.35■□□□□ 0.69
COL18A1-205ENST00000423214 ARRDC4Q8NCT1 418 aa19.35■□□□□ 0.69
COL18A1-205ENST00000423214 SEPT4O43236 478 aa19.34■□□□□ 0.69
COL18A1-205ENST00000423214 COBLO75128 1261 aa19.34■□□□□ 0.69
COL18A1-205ENST00000423214 TMEM132BQ14DG7 1078 aa19.34■□□□□ 0.69
COL18A1-205ENST00000423214 FAM83BQ5T0W9 1011 aa19.34■□□□□ 0.69
COL18A1-205ENST00000423214 GJC2Q5T442 439 aaPredicted RBP19.34■□□□□ 0.69
COL18A1-205ENST00000423214 ANO1Q5XXA6 986 aa19.34■□□□□ 0.69
COL18A1-205ENST00000423214 GPR153Q6NV75 609 aa19.34■□□□□ 0.69
COL18A1-205ENST00000423214 STK11IPQ8N1F8 1099 aa19.34■□□□□ 0.69
COL18A1-205ENST00000423214 KBTBD3Q8NAB2 608 aa19.34■□□□□ 0.69
COL18A1-205ENST00000423214 MAML3Q96JK9 1138 aa19.34■□□□□ 0.69
COL18A1-205ENST00000423214 MMP19Q99542 508 aa19.34■□□□□ 0.69
COL18A1-205ENST00000423214 LBHD1Q9BQE6 289 aaPredicted RBP19.34■□□□□ 0.69
COL18A1-205ENST00000423214 MKNK2Q9HBH9 465 aa19.34■□□□□ 0.69
COL18A1-205ENST00000423214 FBXO28Q9NVF7 368 aa19.34■□□□□ 0.69
COL18A1-205ENST00000423214 COL6A3P12111 3177 aa19.33■□□□□ 0.69
COL18A1-205ENST00000423214 IGHA2P01877 340 aa19.33■□□□□ 0.68
COL18A1-205ENST00000423214 COPB2P35606 906 aa19.33■□□□□ 0.68
COL18A1-205ENST00000423214 RTP1P59025 263 aa19.33■□□□□ 0.68
COL18A1-205ENST00000423214 KCTD2Q14681 263 aa19.33■□□□□ 0.68
COL18A1-205ENST00000423214 APPBP2Q92624 585 aa19.33■□□□□ 0.68
COL18A1-205ENST00000423214 STRBPQ96SI9 672 aaKnown RBP19.33■□□□□ 0.68
COL18A1-205ENST00000423214 PPP1R9AQ9ULJ8 1098 aa19.33■□□□□ 0.68
COL18A1-205ENST00000423214 MINDY4BA8MYZ0 360 aa19.32■□□□□ 0.68
COL18A1-205ENST00000423214 TDO2P48775 406 aa19.32■□□□□ 0.68
COL18A1-205ENST00000423214 SBK1Q52WX2 424 aa19.32■□□□□ 0.68
COL18A1-205ENST00000423214 TSHZ3Q63HK5 1081 aa19.32■□□□□ 0.68
COL18A1-205ENST00000423214 GIMAP6Q6P9H5 292 aa19.32■□□□□ 0.68
COL18A1-205ENST00000423214 RIOX2Q8IUF8 465 aa19.32■□□□□ 0.68
COL18A1-205ENST00000423214 DEFB123Q8N688 67 aa19.32■□□□□ 0.68
COL18A1-205ENST00000423214 ATP11BQ9Y2G3 1177 aa19.32■□□□□ 0.68
COL18A1-205ENST00000423214 VWA5AO00534 786 aa19.31■□□□□ 0.68
COL18A1-205ENST00000423214 ZFYP08048 801 aaPredicted RBP19.31■□□□□ 0.68
COL18A1-205ENST00000423214 LRRFIP1Q32MZ4 808 aaKnown RBP19.31■□□□□ 0.68
COL18A1-205ENST00000423214 GSG1L2A8MUP6 293 aa19.3■□□□□ 0.68
COL18A1-205ENST00000423214 RNF113AO15541 343 aaKnown RBP19.3■□□□□ 0.68
COL18A1-205ENST00000423214 GPAA1O43292 621 aa19.3■□□□□ 0.68
COL18A1-205ENST00000423214 GNAT2P19087 354 aa19.3■□□□□ 0.68
COL18A1-205ENST00000423214 RASA1P20936 1047 aa19.3■□□□□ 0.68
COL18A1-205ENST00000423214 STAT3P40763 770 aa19.3■□□□□ 0.68
COL18A1-205ENST00000423214 FAM47AQ5JRC9 791 aa19.3■□□□□ 0.68
COL18A1-205ENST00000423214 PRAMEF19Q5SWL8 479 aa19.3■□□□□ 0.68
COL18A1-205ENST00000423214 OSBP2Q969R2 916 aa19.3■□□□□ 0.68
COL18A1-205ENST00000423214 SLF1Q9BQI6 1058 aa19.3■□□□□ 0.68
COL18A1-205ENST00000423214 DCTPP1Q9H773 170 aa19.3■□□□□ 0.68
COL18A1-205ENST00000423214 ZNF287Q9HBT7 754 aa19.3■□□□□ 0.68
COL18A1-205ENST00000423214 ZNF214Q9UL59 606 aaPredicted RBP19.3■□□□□ 0.68
COL18A1-205ENST00000423214 ADAMTS5Q9UNA0 930 aa19.3■□□□□ 0.68
COL18A1-205ENST00000423214 CTDP1Q9Y5B0 961 aaPredicted RBP19.3■□□□□ 0.68
COL18A1-205ENST00000423214 APPP05067 770 aa19.29■□□□□ 0.68
COL18A1-205ENST00000423214 PGK2P07205 417 aa19.29■□□□□ 0.68
COL18A1-205ENST00000423214 RARBP10826 455 aa19.29■□□□□ 0.68
COL18A1-205ENST00000423214 NUP88Q99567 741 aaPredicted RBP19.29■□□□□ 0.68
COL18A1-205ENST00000423214 PRDM5Q9NQX1 630 aaPredicted RBP19.29■□□□□ 0.68
COL18A1-205ENST00000423214 NRBP1Q9UHY1 535 aa19.29■□□□□ 0.68
COL18A1-205ENST00000423214 LRRC41Q15345 812 aa19.28■□□□□ 0.68
COL18A1-205ENST00000423214 SLC39A5Q6ZMH5 540 aa19.28■□□□□ 0.68
COL18A1-205ENST00000423214 Q7L0L9 218 aa19.28■□□□□ 0.68
COL18A1-205ENST00000423214 SLC17A8Q8NDX2 589 aa19.28■□□□□ 0.68
COL18A1-205ENST00000423214 YTHDC1Q96MU7 727 aaKnown RBP19.28■□□□□ 0.68
COL18A1-205ENST00000423214 TINF2Q9BSI4 451 aa19.28■□□□□ 0.68
COL18A1-205ENST00000423214 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.28■□□□□ 0.68
COL18A1-205ENST00000423214 TEX13BQ9BXU2 312 aa19.28■□□□□ 0.68
COL18A1-205ENST00000423214 EPB41L4AQ9HCS5 686 aaPredicted RBP19.28■□□□□ 0.68
COL18A1-205ENST00000423214 XPNPEP3Q9NQH7 507 aa19.28■□□□□ 0.68
COL18A1-205ENST00000423214 NYAP2Q9P242 653 aa19.28■□□□□ 0.68
COL18A1-205ENST00000423214 M0R2C6 588 aa19.27■□□□□ 0.68
COL18A1-205ENST00000423214 ERC2O15083 957 aa19.27■□□□□ 0.68
COL18A1-205ENST00000423214 NDUFB10O96000 172 aa19.27■□□□□ 0.68
COL18A1-205ENST00000423214 ADCYAP1R1P41586 468 aa19.27■□□□□ 0.68
COL18A1-205ENST00000423214 SNRNP48Q6IEG0 339 aaKnown RBP19.27■□□□□ 0.68
COL18A1-205ENST00000423214 ZNF444Q8N0Y2 327 aaPredicted RBP19.27■□□□□ 0.68
COL18A1-205ENST00000423214 REPS2Q8NFH8 660 aa19.27■□□□□ 0.68
COL18A1-205ENST00000423214 FERMT2Q96AC1 680 aa19.27■□□□□ 0.68
COL18A1-205ENST00000423214 CNPY2Q9Y2B0 182 aa19.27■□□□□ 0.68
COL18A1-205ENST00000423214 DIS3Q9Y2L1 958 aaKnown RBP19.27■□□□□ 0.68
COL18A1-205ENST00000423214 TTC41PQ6P2S7 1318 aa19.26■□□□□ 0.67
COL18A1-205ENST00000423214 F5H6K3 240 aa19.26■□□□□ 0.67
COL18A1-205ENST00000423214 KLRC3Q07444 240 aa19.26■□□□□ 0.67
COL18A1-205ENST00000423214 TRIM60Q495X7 471 aa19.26■□□□□ 0.67
COL18A1-205ENST00000423214 RNF180Q86T96 592 aa19.26■□□□□ 0.67
COL18A1-205ENST00000423214 FSD1Q9BTV5 496 aa19.26■□□□□ 0.67
COL18A1-205ENST00000423214 NACAP1Q9BZK3 213 aa19.26■□□□□ 0.67
COL18A1-205ENST00000423214 CLIP2Q9UDT6 1046 aa19.26■□□□□ 0.67
COL18A1-205ENST00000423214 LRRC37A2A6NM11 1700 aa19.25■□□□□ 0.67
COL18A1-205ENST00000423214 PLIN4Q96Q06 1357 aa19.25■□□□□ 0.67
COL18A1-205ENST00000423214 PRDM1O75626 825 aa19.25■□□□□ 0.67
COL18A1-205ENST00000423214 AKR1A1P14550 325 aa19.25■□□□□ 0.67
COL18A1-205ENST00000423214 SLC4A3P48751 1232 aa19.25■□□□□ 0.67
COL18A1-205ENST00000423214 ZNF792Q3KQV3 632 aa19.25■□□□□ 0.67
COL18A1-205ENST00000423214 PRPF38AQ8NAV1 312 aaKnown RBP19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms