RNA–Protein interactions for RNA: ENST00000422933.5

HDLBP-209, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-209ENST00000422933 IL17RAQ96F46 866 aa11.65□□□□□ -0.54
HDLBP-209ENST00000422933 C12orf42Q96LP6 360 aa11.65□□□□□ -0.54
HDLBP-209ENST00000422933 ZIC5Q96T25 663 aa11.65□□□□□ -0.54
HDLBP-209ENST00000422933 TANGO6Q9C0B7 1094 aa11.65□□□□□ -0.54
HDLBP-209ENST00000422933 ZCCHC17Q9NP64 241 aaKnown RBP11.65□□□□□ -0.54
HDLBP-209ENST00000422933 HOXC10Q9NYD6 342 aa11.65□□□□□ -0.54
HDLBP-209ENST00000422933 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.65□□□□□ -0.54
HDLBP-209ENST00000422933 AGTPBP1Q9UPW5 1226 aa11.65□□□□□ -0.54
HDLBP-209ENST00000422933 SLC45A1Q9Y2W3 748 aa11.65□□□□□ -0.54
HDLBP-209ENST00000422933 FAM155AB1AL88 458 aaPredicted RBP11.64□□□□□ -0.55
HDLBP-209ENST00000422933 ZBTB43O43298 467 aa11.64□□□□□ -0.55
HDLBP-209ENST00000422933 DHX16O60231 1041 aaKnown RBP11.64□□□□□ -0.55
HDLBP-209ENST00000422933 PARP1P09874 1014 aaKnown RBP11.64□□□□□ -0.55
HDLBP-209ENST00000422933 NOVP48745 357 aa11.64□□□□□ -0.55
HDLBP-209ENST00000422933 ANTXR2P58335 489 aa11.64□□□□□ -0.55
HDLBP-209ENST00000422933 MAP2K1Q02750 393 aaPredicted RBP11.64□□□□□ -0.55
HDLBP-209ENST00000422933 SEC23AQ15436 765 aa11.64□□□□□ -0.55
HDLBP-209ENST00000422933 ASPRV1Q53RT3 343 aa11.64□□□□□ -0.55
HDLBP-209ENST00000422933 CPLX2Q6PUV4 134 aaKnown RBP11.64□□□□□ -0.55
HDLBP-209ENST00000422933 FAM160B2Q86V87 743 aa11.64□□□□□ -0.55
HDLBP-209ENST00000422933 SGMS1Q86VZ5 419 aa11.64□□□□□ -0.55
HDLBP-209ENST00000422933 CLEC10AQ8IUN9 316 aa11.64□□□□□ -0.55
HDLBP-209ENST00000422933 SPICE1Q8N0Z3 855 aa11.64□□□□□ -0.55
HDLBP-209ENST00000422933 FBXL16Q8N461 479 aa11.64□□□□□ -0.55
HDLBP-209ENST00000422933 GTF3C2Q8WUA4 911 aaPredicted RBP11.64□□□□□ -0.55
HDLBP-209ENST00000422933 BRF1Q92994 677 aa11.64□□□□□ -0.55
HDLBP-209ENST00000422933 GMCL1Q96IK5 515 aa11.64□□□□□ -0.55
HDLBP-209ENST00000422933 MAP3K14Q99558 947 aa11.64□□□□□ -0.55
HDLBP-209ENST00000422933 LZTS2Q9BRK4 669 aa11.64□□□□□ -0.55
HDLBP-209ENST00000422933 LRRC2Q9BYS8 371 aa11.64□□□□□ -0.55
HDLBP-209ENST00000422933 ALDH8A1Q9H2A2 487 aaPredicted RBP11.64□□□□□ -0.55
HDLBP-209ENST00000422933 LY9Q9HBG7 655 aa11.64□□□□□ -0.55
HDLBP-209ENST00000422933 RBM28Q9NW13 759 aaKnown RBP11.64□□□□□ -0.55
HDLBP-209ENST00000422933 FEM1BQ9UK73 627 aa11.64□□□□□ -0.55
HDLBP-209ENST00000422933 PTPRFP10586 1907 aa11.64□□□□□ -0.55
HDLBP-209ENST00000422933 TNRC18O15417 2968 aaPredicted RBP11.63□□□□□ -0.55
HDLBP-209ENST00000422933 KLF18A0A0U1RQI7 1052 aa11.63□□□□□ -0.55
HDLBP-209ENST00000422933 A0A1W2PRG0 241 aa11.63□□□□□ -0.55
HDLBP-209ENST00000422933 TESPA1A2RU30 521 aaPredicted RBP11.63□□□□□ -0.55
HDLBP-209ENST00000422933 FLOT1O75955 427 aa11.63□□□□□ -0.55
HDLBP-209ENST00000422933 NDUFB10O96000 172 aa11.63□□□□□ -0.55
HDLBP-209ENST00000422933 FDX1P10109 184 aa11.63□□□□□ -0.55
HDLBP-209ENST00000422933 CPA1P15085 419 aa11.63□□□□□ -0.55
HDLBP-209ENST00000422933 VCAM1P19320 739 aa11.63□□□□□ -0.55
HDLBP-209ENST00000422933 GJA5P36382 358 aa11.63□□□□□ -0.55
HDLBP-209ENST00000422933 TM4SF4P48230 202 aa11.63□□□□□ -0.55
HDLBP-209ENST00000422933 STAT2P52630 851 aa11.63□□□□□ -0.55
HDLBP-209ENST00000422933 RCAN1P53805 252 aa11.63□□□□□ -0.55
HDLBP-209ENST00000422933 COG2Q14746 738 aa11.63□□□□□ -0.55
HDLBP-209ENST00000422933 SIAH1Q8IUQ4 282 aa11.63□□□□□ -0.55
HDLBP-209ENST00000422933 ZNF654Q8IZM8 581 aa11.63□□□□□ -0.55
HDLBP-209ENST00000422933 SMCR8Q8TEV9 937 aaPredicted RBP11.63□□□□□ -0.55
HDLBP-209ENST00000422933 MS4A4AQ96JQ5 239 aa11.63□□□□□ -0.55
HDLBP-209ENST00000422933 ZSCAN31Q96LW9 406 aaPredicted RBP11.63□□□□□ -0.55
HDLBP-209ENST00000422933 TCEANC2Q96MN5 208 aa11.63□□□□□ -0.55
HDLBP-209ENST00000422933 PARK7Q99497 189 aaKnown RBP11.63□□□□□ -0.55
HDLBP-209ENST00000422933 RPAP3Q9H6T3 665 aaPredicted RBP11.63□□□□□ -0.55
HDLBP-209ENST00000422933 ZFYVE28Q9HCC9 887 aa11.63□□□□□ -0.55
HDLBP-209ENST00000422933 EMILIN3Q9NT22 766 aa11.63□□□□□ -0.55
HDLBP-209ENST00000422933 TMEM232C9JQI7 657 aa11.62□□□□□ -0.55
HDLBP-209ENST00000422933 PDHXO00330 501 aa11.62□□□□□ -0.55
HDLBP-209ENST00000422933 HOXA7P31268 230 aaPredicted RBP11.62□□□□□ -0.55
HDLBP-209ENST00000422933 RGS19P49795 217 aa11.62□□□□□ -0.55
HDLBP-209ENST00000422933 METAP2P50579 478 aaKnown RBP eCLIP11.62□□□□□ -0.559e-10■□□□□ 9.7
HDLBP-209ENST00000422933 TRAF1Q13077 416 aa11.62□□□□□ -0.55
HDLBP-209ENST00000422933 TAF1CQ15572 869 aaPredicted RBP11.62□□□□□ -0.55
HDLBP-209ENST00000422933 FAM83BQ5T0W9 1011 aa11.62□□□□□ -0.55
HDLBP-209ENST00000422933 SAMD1Q6SPF0 538 aaPredicted RBP11.62□□□□□ -0.55
HDLBP-209ENST00000422933 IFNL1Q8IU54 200 aa11.62□□□□□ -0.55
HDLBP-209ENST00000422933 CCAR1Q8IX12 1150 aaKnown RBP11.62□□□□□ -0.55
HDLBP-209ENST00000422933 PRPF38AQ8NAV1 312 aaKnown RBP11.62□□□□□ -0.55
HDLBP-209ENST00000422933 BRI3BPQ8WY22 251 aa11.62□□□□□ -0.55
HDLBP-209ENST00000422933 ZNF274Q96GC6 653 aaPredicted RBP11.62□□□□□ -0.55
HDLBP-209ENST00000422933 PNMA2Q9UL42 364 aa11.62□□□□□ -0.55
HDLBP-209ENST00000422933 MYPNQ86TC9 1320 aa11.61□□□□□ -0.55
HDLBP-209ENST00000422933 GOLGA8AA7E2F4 631 aa11.61□□□□□ -0.55
HDLBP-209ENST00000422933 GOLGA8BA8MQT2 603 aa11.61□□□□□ -0.55
HDLBP-209ENST00000422933 BTBD19C9JJ37 291 aa11.61□□□□□ -0.55
HDLBP-209ENST00000422933 CPLX1O14810 134 aa11.61□□□□□ -0.55
HDLBP-209ENST00000422933 CA12O43570 354 aa11.61□□□□□ -0.55
HDLBP-209ENST00000422933 PLA2G6O60733 806 aa11.61□□□□□ -0.55
HDLBP-209ENST00000422933 ZBED4O75132 1171 aa11.61□□□□□ -0.55
HDLBP-209ENST00000422933 PDHBP11177 359 aa11.61□□□□□ -0.55
HDLBP-209ENST00000422933 GCLCP48506 637 aaPredicted RBP11.61□□□□□ -0.55
HDLBP-209ENST00000422933 AKAP17AQ02040 695 aaKnown RBP11.61□□□□□ -0.55
HDLBP-209ENST00000422933 APOBRQ0VD83 1088 aa11.61□□□□□ -0.55
HDLBP-209ENST00000422933 RTN1Q16799 776 aa11.61□□□□□ -0.55
HDLBP-209ENST00000422933 APOA5Q6Q788 366 aa11.61□□□□□ -0.55
HDLBP-209ENST00000422933 CATSPERGQ6ZRH7 1159 aa11.61□□□□□ -0.55
HDLBP-209ENST00000422933 MICU3Q86XE3 530 aa11.61□□□□□ -0.55
HDLBP-209ENST00000422933 MB21D1Q8N884 522 aa11.61□□□□□ -0.55
HDLBP-209ENST00000422933 SLF1Q9BQI6 1058 aa11.61□□□□□ -0.55
HDLBP-209ENST00000422933 AGXT2Q9BYV1 514 aa11.61□□□□□ -0.55
HDLBP-209ENST00000422933 SLKQ9H2G2 1235 aaPredicted RBP11.61□□□□□ -0.55
HDLBP-209ENST00000422933 GPCPD1Q9NPB8 672 aa11.61□□□□□ -0.55
HDLBP-209ENST00000422933 LIMCH1Q9UPQ0 1083 aa11.61□□□□□ -0.55
HDLBP-209ENST00000422933 LOC285556D6RIA3 1793 aa11.61□□□□□ -0.55
HDLBP-209ENST00000422933 CCDC85CA6NKD9 419 aa11.6□□□□□ -0.55
HDLBP-209ENST00000422933 KLRF2D3W0D1 207 aa11.6□□□□□ -0.55
HDLBP-209ENST00000422933 CDKL5O76039 1030 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms