RNA–Protein interactions for RNA: ENST00000420692.6

CTSB-203, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 2,230 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-203ENST00000420692 PPP1R13BQ96KQ4 1090 aa18.42■□□□□ 0.54
CTSB-203ENST00000420692 PALM3A6NDB9 673 aaPredicted RBP18.41■□□□□ 0.54
CTSB-203ENST00000420692 KCNJ6P48051 423 aa18.41■□□□□ 0.54
CTSB-203ENST00000420692 CUL4BQ13620 913 aa18.41■□□□□ 0.54
CTSB-203ENST00000420692 LTBP1Q14766 1721 aa18.41■□□□□ 0.54
CTSB-203ENST00000420692 APTXQ7Z2E3 356 aaKnown RBP18.41■□□□□ 0.54
CTSB-203ENST00000420692 ZNF592Q92610 1267 aa18.41■□□□□ 0.54
CTSB-203ENST00000420692 RBM17Q96I25 401 aaKnown RBP18.41■□□□□ 0.54
CTSB-203ENST00000420692 SH3GLB2Q9NR46 395 aa18.41■□□□□ 0.54
CTSB-203ENST00000420692 PODXL2Q9NZ53 605 aa18.41■□□□□ 0.54
CTSB-203ENST00000420692 CDK8P49336 464 aa18.41■□□□□ 0.54
CTSB-203ENST00000420692 WWC2Q6AWC2 1192 aa18.41■□□□□ 0.54
CTSB-203ENST00000420692 PDXDC2PQ6P474 469 aa18.41■□□□□ 0.54
CTSB-203ENST00000420692 TMEM139Q8IV31 216 aa18.41■□□□□ 0.54
CTSB-203ENST00000420692 ZNF444Q8N0Y2 327 aaPredicted RBP18.41■□□□□ 0.54
CTSB-203ENST00000420692 ANKRD7Q92527 254 aa18.41■□□□□ 0.54
CTSB-203ENST00000420692 MAP7D2Q96T17 732 aa18.41■□□□□ 0.54
CTSB-203ENST00000420692 CPVLQ9H3G5 476 aa18.41■□□□□ 0.54
CTSB-203ENST00000420692 PCDHA4Q9UN74 947 aa18.41■□□□□ 0.54
CTSB-203ENST00000420692 PPP1R3GB7ZBB8 358 aa18.4■□□□□ 0.54
CTSB-203ENST00000420692 POLRMTO00411 1230 aaKnown RBP18.4■□□□□ 0.54
CTSB-203ENST00000420692 BBOX1O75936 387 aa18.4■□□□□ 0.54
CTSB-203ENST00000420692 ERCC5P28715 1186 aaPredicted RBP18.4■□□□□ 0.54
CTSB-203ENST00000420692 NT5C2P49902 561 aa18.4■□□□□ 0.54
CTSB-203ENST00000420692 ST5P78524 1137 aa18.4■□□□□ 0.54
CTSB-203ENST00000420692 NAA30Q147X3 362 aaPredicted RBP18.4■□□□□ 0.54
CTSB-203ENST00000420692 SMYD4Q8IYR2 804 aaPredicted RBP18.4■□□□□ 0.54
CTSB-203ENST00000420692 MYH1P12882 1939 aa18.4■□□□□ 0.54
CTSB-203ENST00000420692 KLRG2A4D1S0 409 aaPredicted RBP18.39■□□□□ 0.54
CTSB-203ENST00000420692 PSDA5PKW4 1024 aaPredicted RBP18.39■□□□□ 0.54
CTSB-203ENST00000420692 C16orf86Q6ZW13 317 aa18.39■□□□□ 0.54
CTSB-203ENST00000420692 TEX11Q8IYF3 940 aa18.39■□□□□ 0.54
CTSB-203ENST00000420692 FAM163AQ96GL9 167 aaPredicted RBP18.39■□□□□ 0.54
CTSB-203ENST00000420692 DACH1Q9UI36 760 aa18.39■□□□□ 0.54
CTSB-203ENST00000420692 MTMR7Q9Y216 660 aa18.39■□□□□ 0.54
CTSB-203ENST00000420692 FLT1P17948 1338 aa18.39■□□□□ 0.53
CTSB-203ENST00000420692 GOLGA8HP0CJ92 632 aa18.39■□□□□ 0.53
CTSB-203ENST00000420692 CALML3P27482 149 aa18.39■□□□□ 0.53
CTSB-203ENST00000420692 MFSD14BQ5SR56 506 aa18.39■□□□□ 0.53
CTSB-203ENST00000420692 PROM2Q8N271 834 aa18.39■□□□□ 0.53
CTSB-203ENST00000420692 PCDHA6Q9UN73 950 aa18.39■□□□□ 0.53
CTSB-203ENST00000420692 STX8Q9UNK0 236 aa18.39■□□□□ 0.53
CTSB-203ENST00000420692 PCDHA8Q9Y5H6 950 aa18.39■□□□□ 0.53
CTSB-203ENST00000420692 GAKO14976 1311 aa18.38■□□□□ 0.53
CTSB-203ENST00000420692 STXBP3O00186 592 aa18.38■□□□□ 0.53
CTSB-203ENST00000420692 TOP1P11387 765 aaKnown RBP18.38■□□□□ 0.53
CTSB-203ENST00000420692 CDC25AP30304 524 aa18.38■□□□□ 0.53
CTSB-203ENST00000420692 NCBP1Q09161 790 aaKnown RBP18.38■□□□□ 0.53
CTSB-203ENST00000420692 NR1I3Q14994 352 aa18.38■□□□□ 0.53
CTSB-203ENST00000420692 CCDC112Q8NEF3 446 aa18.38■□□□□ 0.53
CTSB-203ENST00000420692 TRPC5Q9UL62 973 aaPredicted RBP18.38■□□□□ 0.53
CTSB-203ENST00000420692 CCDC178Q5BJE1 867 aa18.38■□□□□ 0.53
CTSB-203ENST00000420692 GSDMAQ96QA5 445 aa18.38■□□□□ 0.53
CTSB-203ENST00000420692 EYA3Q99504 573 aa18.38■□□□□ 0.53
CTSB-203ENST00000420692 BLZF1Q9H2G9 400 aa18.38■□□□□ 0.53
CTSB-203ENST00000420692 HSPA1LP34931 641 aa18.37■□□□□ 0.53
CTSB-203ENST00000420692 GNAQP50148 359 aa18.37■□□□□ 0.53
CTSB-203ENST00000420692 STX17P56962 302 aa18.37■□□□□ 0.53
CTSB-203ENST00000420692 DHX8Q14562 1220 aaKnown RBP18.37■□□□□ 0.53
CTSB-203ENST00000420692 AMOTL1Q8IY63 956 aa18.37■□□□□ 0.53
CTSB-203ENST00000420692 NEDD1Q8NHV4 660 aa18.37■□□□□ 0.53
CTSB-203ENST00000420692 CRAMP1Q96RY5 1269 aa18.37■□□□□ 0.53
CTSB-203ENST00000420692 TMEM60Q9H2L4 133 aa18.37■□□□□ 0.53
CTSB-203ENST00000420692 BARHL2Q9NY43 387 aa18.37■□□□□ 0.53
CTSB-203ENST00000420692 LRRC37AA6NMS7 1700 aa18.37■□□□□ 0.53
CTSB-203ENST00000420692 CDK11BP21127 795 aaKnown RBP18.37■□□□□ 0.53
CTSB-203ENST00000420692 ARL6IP4Q66PJ3 421 aaKnown RBP18.37■□□□□ 0.53
CTSB-203ENST00000420692 MTERF4Q7Z6M4 381 aaKnown RBP18.37■□□□□ 0.53
CTSB-203ENST00000420692 DAGLBQ8NCG7 672 aa18.37■□□□□ 0.53
CTSB-203ENST00000420692 FOCADQ5VW36 1801 aa18.36■□□□□ 0.53
CTSB-203ENST00000420692 ANKRD31Q8N7Z5 1873 aa18.36■□□□□ 0.53
CTSB-203ENST00000420692 SLC27A3Q5K4L6 730 aa18.36■□□□□ 0.53
CTSB-203ENST00000420692 SPATA1Q5VX52 437 aa18.36■□□□□ 0.53
CTSB-203ENST00000420692 KLHL10Q6JEL2 608 aa18.36■□□□□ 0.53
CTSB-203ENST00000420692 TC2NQ8N9U0 490 aa18.36■□□□□ 0.53
CTSB-203ENST00000420692 IQUBQ8NA54 791 aa18.36■□□□□ 0.53
CTSB-203ENST00000420692 A0A1B0GTH6 734 aa18.35■□□□□ 0.53
CTSB-203ENST00000420692 KLRF2D3W0D1 207 aa18.35■□□□□ 0.53
CTSB-203ENST00000420692 TEX33O43247 280 aa18.35■□□□□ 0.53
CTSB-203ENST00000420692 TRIM37O94972 964 aa18.35■□□□□ 0.53
CTSB-203ENST00000420692 NOVP48745 357 aa18.35■□□□□ 0.53
CTSB-203ENST00000420692 CT47A1Q5JQC4 288 aaPredicted RBP18.35■□□□□ 0.53
CTSB-203ENST00000420692 CDKAL1Q5VV42 579 aa18.35■□□□□ 0.53
CTSB-203ENST00000420692 HEATR3Q7Z4Q2 680 aa18.35■□□□□ 0.53
CTSB-203ENST00000420692 BRWD3Q6RI45 1802 aa18.35■□□□□ 0.53
CTSB-203ENST00000420692 C6orf229H3BNL8 230 aa18.35■□□□□ 0.53
CTSB-203ENST00000420692 COBLO75128 1261 aa18.35■□□□□ 0.53
CTSB-203ENST00000420692 INF2Q27J81 1249 aa18.35■□□□□ 0.53
CTSB-203ENST00000420692 USP17L2Q6R6M4 530 aa18.35■□□□□ 0.53
CTSB-203ENST00000420692 REXO1L1PQ8IX06 675 aa18.35■□□□□ 0.53
CTSB-203ENST00000420692 CEP95Q96GE4 821 aa18.35■□□□□ 0.53
CTSB-203ENST00000420692 DAGLAQ9Y4D2 1042 aa18.35■□□□□ 0.53
CTSB-203ENST00000420692 PP2D1A8MPX8 630 aa18.34■□□□□ 0.53
CTSB-203ENST00000420692 FANCGO15287 622 aa18.34■□□□□ 0.53
CTSB-203ENST00000420692 LONP1P36776 959 aaKnown RBP18.34■□□□□ 0.53
CTSB-203ENST00000420692 NAALADL2Q58DX5 795 aa18.34■□□□□ 0.53
CTSB-203ENST00000420692 SPECC1LQ69YQ0 1117 aa18.34■□□□□ 0.53
CTSB-203ENST00000420692 CERS3Q8IU89 383 aa18.34■□□□□ 0.53
CTSB-203ENST00000420692 LRRC15Q8TF66 581 aa18.34■□□□□ 0.53
CTSB-203ENST00000420692 SPZ1Q9BXG8 430 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms