RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 SLC45A1Q9Y2W3 748 aa35.83■■■■□ 3.33
CSNK1E-206ENST00000413574 PDHBP11177 359 aa35.83■■■■□ 3.33
CSNK1E-206ENST00000413574 SLC1A4P43007 532 aa35.83■■■■□ 3.33
CSNK1E-206ENST00000413574 PABPC4Q13310 644 aaKnown RBP eCLIP35.83■■■■□ 3.33
CSNK1E-206ENST00000413574 NFXL1Q6ZNB6 911 aa35.83■■■■□ 3.33
CSNK1E-206ENST00000413574 KCTD1Q719H9 257 aa35.83■■■■□ 3.33
CSNK1E-206ENST00000413574 GMCL1Q96IK5 515 aa35.83■■■■□ 3.33
CSNK1E-206ENST00000413574 R3HDMLQ9H3Y0 253 aa35.83■■■■□ 3.33
CSNK1E-206ENST00000413574 ZCCHC17Q9NP64 241 aaKnown RBP35.83■■■■□ 3.33
CSNK1E-206ENST00000413574 FBXO28Q9NVF7 368 aa35.83■■■■□ 3.33
CSNK1E-206ENST00000413574 BMP3P12645 472 aa35.82■■■■□ 3.32
CSNK1E-206ENST00000413574 LIFRP42702 1097 aa35.82■■■■□ 3.32
CSNK1E-206ENST00000413574 CRHR2Q13324 411 aa35.82■■■■□ 3.32
CSNK1E-206ENST00000413574 FRMPD2Q68DX3 1309 aaPredicted RBP35.81■■■■□ 3.32
CSNK1E-206ENST00000413574 ALDH1A1P00352 501 aa35.81■■■■□ 3.32
CSNK1E-206ENST00000413574 OSBPP22059 807 aa35.81■■■■□ 3.32
CSNK1E-206ENST00000413574 IRX3P78415 501 aaPredicted RBP35.81■■■■□ 3.32
CSNK1E-206ENST00000413574 FGD1P98174 961 aa35.81■■■■□ 3.32
CSNK1E-206ENST00000413574 SAMD1Q6SPF0 538 aaPredicted RBP35.81■■■■□ 3.32
CSNK1E-206ENST00000413574 TBC1D32Q96NH3 1257 aa35.81■■■■□ 3.32
CSNK1E-206ENST00000413574 P2RX7Q99572 595 aaKnown RBP35.81■■■■□ 3.32
CSNK1E-206ENST00000413574 MYL10Q9BUA6 226 aa35.81■■■■□ 3.32
CSNK1E-206ENST00000413574 TBC1D8O95759 1140 aa35.8■■■■□ 3.32
CSNK1E-206ENST00000413574 CCDC96Q2M329 555 aa35.8■■■■□ 3.32
CSNK1E-206ENST00000413574 DCAF4Q8WV16 495 aa35.8■■■■□ 3.32
CSNK1E-206ENST00000413574 CCDC69A6NI79 296 aa35.79■■■■□ 3.32
CSNK1E-206ENST00000413574 SNHG28P0DPA3 235 aa35.79■■■■□ 3.32
CSNK1E-206ENST00000413574 RAB11FIP4Q86YS3 637 aa35.79■■■■□ 3.32
CSNK1E-206ENST00000413574 TSKSQ9UJT2 592 aa35.79■■■■□ 3.32
CSNK1E-206ENST00000413574 CA12O43570 354 aa35.79■■■■□ 3.32
CSNK1E-206ENST00000413574 FLOT1O75955 427 aa35.79■■■■□ 3.32
CSNK1E-206ENST00000413574 ZNF654Q8IZM8 581 aa35.79■■■■□ 3.32
CSNK1E-206ENST00000413574 TMTC2Q8N394 836 aa35.79■■■■□ 3.32
CSNK1E-206ENST00000413574 BRF1Q92994 677 aa35.79■■■■□ 3.32
CSNK1E-206ENST00000413574 PARK7Q99497 189 aaKnown RBP35.79■■■■□ 3.32
CSNK1E-206ENST00000413574 BEGAINQ9BUH8 593 aa35.79■■■■□ 3.32
CSNK1E-206ENST00000413574 GPCPD1Q9NPB8 672 aa35.79■■■■□ 3.32
CSNK1E-206ENST00000413574 PDRG1Q9NUG6 133 aa35.79■■■■□ 3.32
CSNK1E-206ENST00000413574 PNMA3Q9UL41 463 aa35.79■■■■□ 3.32
CSNK1E-206ENST00000413574 BRPF3Q9ULD4 1205 aa35.79■■■■□ 3.32
CSNK1E-206ENST00000413574 GOLGA8HP0CJ92 632 aa35.78■■■■□ 3.32
CSNK1E-206ENST00000413574 TROAPQ12815 778 aa35.78■■■■□ 3.32
CSNK1E-206ENST00000413574 CATIPQ7Z7H3 387 aa35.78■■■■□ 3.32
CSNK1E-206ENST00000413574 SGMS1Q86VZ5 419 aa35.78■■■■□ 3.32
CSNK1E-206ENST00000413574 TMEM232C9JQI7 657 aa35.77■■■■□ 3.32
CSNK1E-206ENST00000413574 TTBK2Q6IQ55 1244 aa35.77■■■■□ 3.32
CSNK1E-206ENST00000413574 ZFYVE28Q9HCC9 887 aa35.77■■■■□ 3.32
CSNK1E-206ENST00000413574 RXRAP19793 462 aa35.76■■■■□ 3.32
CSNK1E-206ENST00000413574 APOBRQ0VD83 1088 aa35.76■■■■□ 3.32
CSNK1E-206ENST00000413574 TOB2Q14106 344 aaPredicted RBP35.76■■■■□ 3.32
CSNK1E-206ENST00000413574 POTEEQ6S8J3 1075 aa35.76■■■■□ 3.32
CSNK1E-206ENST00000413574 SMCR8Q8TEV9 937 aaPredicted RBP35.76■■■■□ 3.32
CSNK1E-206ENST00000413574 NUP133Q8WUM0 1156 aa35.76■■■■□ 3.32
CSNK1E-206ENST00000413574 LARP6Q9BRS8 491 aaKnown RBP35.76■■■■□ 3.32
CSNK1E-206ENST00000413574 AGXT2Q9BYV1 514 aa35.76■■■■□ 3.32
CSNK1E-206ENST00000413574 PEX10O60683 326 aa35.75■■■■□ 3.31
CSNK1E-206ENST00000413574 HERVK_113P62684 666 aa35.75■■■■□ 3.31
CSNK1E-206ENST00000413574 ZNF543Q08ER8 600 aa35.75■■■■□ 3.31
CSNK1E-206ENST00000413574 COG2Q14746 738 aa35.75■■■■□ 3.31
CSNK1E-206ENST00000413574 SLC12A7Q9Y666 1083 aa35.75■■■■□ 3.31
CSNK1E-206ENST00000413574 NEK4P51957 841 aa35.75■■■■□ 3.31
CSNK1E-206ENST00000413574 COL11A1P12107 1806 aaPredicted RBP35.74■■■■□ 3.31
CSNK1E-206ENST00000413574 SPDYE16A6NNV3 312 aaPredicted RBP35.74■■■■□ 3.31
CSNK1E-206ENST00000413574 SLC16A2P36021 539 aa35.74■■■■□ 3.31
CSNK1E-206ENST00000413574 FBXL16Q8N461 479 aa35.74■■■■□ 3.31
CSNK1E-206ENST00000413574 SAGE1Q9NXZ1 904 aa35.74■■■■□ 3.31
CSNK1E-206ENST00000413574 CPA4Q9UI42 421 aa35.74■■■■□ 3.31
CSNK1E-206ENST00000413574 ADGRA2Q96PE1 1338 aa35.73■■■■□ 3.31
CSNK1E-206ENST00000413574 KLF18A0A0U1RQI7 1052 aa35.73■■■■□ 3.31
CSNK1E-206ENST00000413574 DSG3P32926 999 aa35.73■■■■□ 3.31
CSNK1E-206ENST00000413574 IKQ13123 557 aaPredicted RBP35.73■■■■□ 3.31
CSNK1E-206ENST00000413574 APOA5Q6Q788 366 aa35.73■■■■□ 3.31
CSNK1E-206ENST00000413574 CCDC144CPQ8IYA2 1237 aa35.73■■■■□ 3.31
CSNK1E-206ENST00000413574 STAG2Q8N3U4 1231 aa35.73■■■■□ 3.31
CSNK1E-206ENST00000413574 ATG4CQ96DT6 458 aa35.73■■■■□ 3.31
CSNK1E-206ENST00000413574 CPVLQ9H3G5 476 aa35.73■■■■□ 3.31
CSNK1E-206ENST00000413574 FEM1BQ9UK73 627 aa35.73■■■■□ 3.31
CSNK1E-206ENST00000413574 TLR2O60603 784 aa35.72■■■■□ 3.31
CSNK1E-206ENST00000413574 PARP1P09874 1014 aaKnown RBP35.72■■■■□ 3.31
CSNK1E-206ENST00000413574 KIFC2Q96AC6 838 aa35.72■■■■□ 3.31
CSNK1E-206ENST00000413574 SLF1Q9BQI6 1058 aa35.72■■■■□ 3.31
CSNK1E-206ENST00000413574 PPP1R9AQ9ULJ8 1098 aa35.72■■■■□ 3.31
CSNK1E-206ENST00000413574 NAP1L2Q9ULW6 460 aaPredicted RBP35.72■■■■□ 3.31
CSNK1E-206ENST00000413574 STAT2P52630 851 aa35.72■■■■□ 3.31
CSNK1E-206ENST00000413574 MICU3Q86XE3 530 aa35.72■■■■□ 3.31
CSNK1E-206ENST00000413574 CFHR5Q9BXR6 569 aa35.72■■■■□ 3.31
CSNK1E-206ENST00000413574 HOXC10Q9NYD6 342 aa35.72■■■■□ 3.31
CSNK1E-206ENST00000413574 MAD2L2Q9UI95 211 aa35.72■■■■□ 3.31
CSNK1E-206ENST00000413574 DDAH1O94760 285 aa35.71■■■■□ 3.31
CSNK1E-206ENST00000413574 GRM4Q14833 912 aa35.71■■■■□ 3.31
CSNK1E-206ENST00000413574 UBA5Q9GZZ9 404 aa35.7■■■■□ 3.31
CSNK1E-206ENST00000413574 A0A0G2JMZ2 1700 aa35.69■■■■□ 3.3
CSNK1E-206ENST00000413574 HSPA1AP0DMV8 641 aaKnown RBP35.69■■■■□ 3.3
CSNK1E-206ENST00000413574 HSPA1BP0DMV9 641 aaKnown RBP35.69■■■■□ 3.3
CSNK1E-206ENST00000413574 AK2P54819 239 aa35.69■■■■□ 3.3
CSNK1E-206ENST00000413574 ASPRV1Q53RT3 343 aa35.69■■■■□ 3.3
CSNK1E-206ENST00000413574 GPATCH4Q5T3I0 446 aaKnown RBP35.69■■■■□ 3.3
CSNK1E-206ENST00000413574 ANKRD13CQ8N6S4 541 aa35.69■■■■□ 3.3
CSNK1E-206ENST00000413574 PRPF38AQ8NAV1 312 aaKnown RBP35.69■■■■□ 3.3
CSNK1E-206ENST00000413574 CHURC1Q8WUH1 139 aa35.69■■■■□ 3.3
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms