RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 CALM2P0DP24 149 aa15.44■□□□□ 0.06
CLTCL1-201ENST00000412649 CALM3P0DP25 149 aa15.44■□□□□ 0.06
CLTCL1-201ENST00000412649 BRD2P25440 801 aaKnown RBP15.44■□□□□ 0.06
CLTCL1-201ENST00000412649 PTPN12Q05209 780 aaKnown RBP15.44■□□□□ 0.06
CLTCL1-201ENST00000412649 PDE4BQ07343 736 aa15.44■□□□□ 0.06
CLTCL1-201ENST00000412649 TMEM266Q2M3C6 531 aa15.44■□□□□ 0.06
CLTCL1-201ENST00000412649 FAM207AQ9NSI2 230 aaPredicted RBP15.44■□□□□ 0.06
CLTCL1-201ENST00000412649 VPS54Q9P1Q0 977 aa15.44■□□□□ 0.06
CLTCL1-201ENST00000412649 V9GY48 417 aaPredicted RBP15.44■□□□□ 0.06
CLTCL1-201ENST00000412649 PIK3AP1Q6ZUJ8 805 aa15.44■□□□□ 0.06
CLTCL1-201ENST00000412649 PLBD2Q8NHP8 589 aa15.44■□□□□ 0.06
CLTCL1-201ENST00000412649 DONSONQ9NYP3 566 aa15.44■□□□□ 0.06
CLTCL1-201ENST00000412649 MBD4O95243 580 aa15.44■□□□□ 0.06
CLTCL1-201ENST00000412649 ATP1A1P05023 1023 aaKnown RBP15.44■□□□□ 0.06
CLTCL1-201ENST00000412649 LMNTD2Q8IXW0 634 aa15.44■□□□□ 0.06
CLTCL1-201ENST00000412649 CCDC63Q8NA47 563 aa15.44■□□□□ 0.06
CLTCL1-201ENST00000412649 KIFC2Q96AC6 838 aa15.44■□□□□ 0.06
CLTCL1-201ENST00000412649 RASAL2Q9UJF2 1139 aa15.44■□□□□ 0.06
CLTCL1-201ENST00000412649 EXOC5O00471 708 aa15.43■□□□□ 0.06
CLTCL1-201ENST00000412649 PCK1P35558 622 aa15.43■□□□□ 0.06
CLTCL1-201ENST00000412649 MRPS25P82663 173 aaKnown RBP15.43■□□□□ 0.06
CLTCL1-201ENST00000412649 CCDC6Q16204 474 aa15.43■□□□□ 0.06
CLTCL1-201ENST00000412649 CCDC170Q8IYT3 715 aa15.43■□□□□ 0.06
CLTCL1-201ENST00000412649 OSBP2Q969R2 916 aa15.43■□□□□ 0.06
CLTCL1-201ENST00000412649 RWDD2AQ9UIY3 292 aa15.43■□□□□ 0.06
CLTCL1-201ENST00000412649 PTPRMP28827 1452 aa15.43■□□□□ 0.06
CLTCL1-201ENST00000412649 PPRC1Q5VV67 1664 aaKnown RBP15.43■□□□□ 0.06
CLTCL1-201ENST00000412649 PRR36Q9H6K5 1346 aa15.43■□□□□ 0.06
CLTCL1-201ENST00000412649 HMGB1P1B2RPK0 211 aaPredicted RBP15.43■□□□□ 0.06
CLTCL1-201ENST00000412649 MMP1P03956 469 aa15.43■□□□□ 0.06
CLTCL1-201ENST00000412649 CXCR5P32302 372 aa15.43■□□□□ 0.06
CLTCL1-201ENST00000412649 RBBP5Q15291 538 aaKnown RBP15.43■□□□□ 0.06
CLTCL1-201ENST00000412649 SLC9C1Q4G0N8 1177 aa15.43■□□□□ 0.06
CLTCL1-201ENST00000412649 CCDC84Q86UT8 332 aaPredicted RBP15.43■□□□□ 0.06
CLTCL1-201ENST00000412649 CEP104O60308 925 aa15.43■□□□□ 0.06
CLTCL1-201ENST00000412649 RPN1P04843 607 aaKnown RBP15.43■□□□□ 0.06
CLTCL1-201ENST00000412649 GNAT2P19087 354 aa15.43■□□□□ 0.06
CLTCL1-201ENST00000412649 EEF1GP26641 437 aaKnown RBP15.43■□□□□ 0.06
CLTCL1-201ENST00000412649 RRAGAQ7L523 313 aa15.43■□□□□ 0.06
CLTCL1-201ENST00000412649 CMTR1Q8N1G2 835 aaKnown RBP15.43■□□□□ 0.06
CLTCL1-201ENST00000412649 PAGE5Q96GU1 130 aa15.43■□□□□ 0.06
CLTCL1-201ENST00000412649 FRMPD1Q5SYB0 1578 aa15.43■□□□□ 0.06
CLTCL1-201ENST00000412649 ZCCHC11Q5TAX3 1644 aaKnown RBP15.42■□□□□ 0.06
CLTCL1-201ENST00000412649 FDPSP14324 419 aaKnown RBP15.42■□□□□ 0.06
CLTCL1-201ENST00000412649 CYP27A1Q02318 531 aa15.42■□□□□ 0.06
CLTCL1-201ENST00000412649 CTDSPL2Q05D32 466 aa15.42■□□□□ 0.06
CLTCL1-201ENST00000412649 CCNI2Q6ZMN8 369 aaPredicted RBP15.42■□□□□ 0.06
CLTCL1-201ENST00000412649 ARMC9Q7Z3E5 817 aa15.42■□□□□ 0.06
CLTCL1-201ENST00000412649 MAGEB6Q8N7X4 407 aa15.42■□□□□ 0.06
CLTCL1-201ENST00000412649 PCDHB6Q9Y5E3 794 aa15.42■□□□□ 0.06
CLTCL1-201ENST00000412649 MYCNP04198 464 aaPredicted RBP15.42■□□□□ 0.06
CLTCL1-201ENST00000412649 TCP11X2Q5H9J9 407 aa15.42■□□□□ 0.06
CLTCL1-201ENST00000412649 ANKRD13CQ8N6S4 541 aa15.42■□□□□ 0.06
CLTCL1-201ENST00000412649 TCP11Q8WWU5 503 aa15.42■□□□□ 0.06
CLTCL1-201ENST00000412649 LRWD1Q9UFC0 647 aa15.42■□□□□ 0.06
CLTCL1-201ENST00000412649 BUB1O43683 1085 aa15.42■□□□□ 0.06
CLTCL1-201ENST00000412649 FMNL1O95466 1100 aaPredicted RBP15.42■□□□□ 0.06
CLTCL1-201ENST00000412649 USP6P35125 1406 aa15.42■□□□□ 0.06
CLTCL1-201ENST00000412649 NHEJ1Q9H9Q4 299 aaPredicted RBP15.42■□□□□ 0.06
CLTCL1-201ENST00000412649 CDHR2Q9BYE9 1310 aa15.42■□□□□ 0.06
CLTCL1-201ENST00000412649 ARAP3Q8WWN8 1544 aa15.42■□□□□ 0.06
CLTCL1-201ENST00000412649 B4DLN1 442 aa15.42■□□□□ 0.06
CLTCL1-201ENST00000412649 MYO1FO00160 1098 aa15.42■□□□□ 0.06
CLTCL1-201ENST00000412649 HIBCHQ6NVY1 386 aaPredicted RBP15.42■□□□□ 0.06
CLTCL1-201ENST00000412649 THEMISQ8N1K5 641 aaPredicted RBP15.42■□□□□ 0.06
CLTCL1-201ENST00000412649 RETREG2Q8NC44 543 aa15.42■□□□□ 0.06
CLTCL1-201ENST00000412649 DEPDC5O75140 1603 aa15.41■□□□□ 0.06
CLTCL1-201ENST00000412649 NR5A1Q13285 461 aa15.41■□□□□ 0.06
CLTCL1-201ENST00000412649 RPS6KA1Q15418 735 aa15.41■□□□□ 0.06
CLTCL1-201ENST00000412649 ZFYVE27Q5T4F4 411 aa15.41■□□□□ 0.06
CLTCL1-201ENST00000412649 KRT12Q99456 494 aa15.41■□□□□ 0.06
CLTCL1-201ENST00000412649 TRIM7Q9C029 511 aa15.41■□□□□ 0.06
CLTCL1-201ENST00000412649 UTP11Q9Y3A2 253 aaKnown RBP15.41■□□□□ 0.06
CLTCL1-201ENST00000412649 ZNF609O15014 1411 aa15.41■□□□□ 0.06
CLTCL1-201ENST00000412649 RAD21O60216 631 aa15.41■□□□□ 0.06
CLTCL1-201ENST00000412649 FXR1P51114 621 aaKnown RBP eCLIP15.41■□□□□ 0.06
CLTCL1-201ENST00000412649 PARP9Q8IXQ6 854 aa15.41■□□□□ 0.06
CLTCL1-201ENST00000412649 TUBGCP2Q9BSJ2 902 aa15.41■□□□□ 0.06
CLTCL1-201ENST00000412649 LMTK2Q8IWU2 1503 aa15.41■□□□□ 0.06
CLTCL1-201ENST00000412649 RAPGEF1Q13905 1077 aa15.41■□□□□ 0.06
CLTCL1-201ENST00000412649 NLRP14Q86W24 1093 aa15.41■□□□□ 0.06
CLTCL1-201ENST00000412649 CCDC197Q8NCU1 140 aa15.41■□□□□ 0.06
CLTCL1-201ENST00000412649 LRRC27Q9C0I9 530 aa15.41■□□□□ 0.06
CLTCL1-201ENST00000412649 GPR108Q9NPR9 543 aa15.41■□□□□ 0.06
CLTCL1-201ENST00000412649 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.41■□□□□ 0.06
CLTCL1-201ENST00000412649 NFU1Q9UMS0 254 aa15.41■□□□□ 0.06
CLTCL1-201ENST00000412649 SH2B2O14492 632 aaPredicted RBP15.4■□□□□ 0.06
CLTCL1-201ENST00000412649 PPP2R5BQ15173 497 aa15.4■□□□□ 0.06
CLTCL1-201ENST00000412649 ZNF579Q8NAF0 562 aaKnown RBP15.4■□□□□ 0.06
CLTCL1-201ENST00000412649 EPSTI1Q96J88 318 aa15.4■□□□□ 0.06
CLTCL1-201ENST00000412649 GSTTP1A0A1W2PQM5 241 aa15.4■□□□□ 0.06
CLTCL1-201ENST00000412649 hCG_1642624A0A1W2PR95 340 aa15.4■□□□□ 0.06
CLTCL1-201ENST00000412649 ZPR1O75312 459 aa15.4■□□□□ 0.06
CLTCL1-201ENST00000412649 KRT13P13646 458 aa15.4■□□□□ 0.06
CLTCL1-201ENST00000412649 ADD3Q9UEY8 706 aaKnown RBP15.4■□□□□ 0.06
CLTCL1-201ENST00000412649 ZBED6P86452 979 aa15.4■□□□□ 0.06
CLTCL1-201ENST00000412649 AKNAD1Q5T1N1 836 aa15.4■□□□□ 0.06
CLTCL1-201ENST00000412649 TCERG1LQ5VWI1 586 aa15.4■□□□□ 0.06
CLTCL1-201ENST00000412649 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.4■□□□□ 0.06
CLTCL1-201ENST00000412649 MTRF1LQ9UGC7 380 aaKnown RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms