RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 DTX3LQ8TDB6 740 aa5.03□□□□□ -1.6
PTPN13-202ENST00000411767 CARD10Q9BWT7 1032 aa5.03□□□□□ -1.6
PTPN13-202ENST00000411767 AGTPBP1Q9UPW5 1226 aa5.03□□□□□ -1.6
PTPN13-202ENST00000411767 POLR2DO15514 142 aaKnown RBP5.03□□□□□ -1.6
PTPN13-202ENST00000411767 RGS10O43665 173 aa5.03□□□□□ -1.6
PTPN13-202ENST00000411767 GSTA1P08263 222 aa5.03□□□□□ -1.6
PTPN13-202ENST00000411767 GSTA2P09210 222 aa5.03□□□□□ -1.6
PTPN13-202ENST00000411767 RHOXF2BP0C7M4 288 aa5.03□□□□□ -1.6
PTPN13-202ENST00000411767 CAPZA2P47755 286 aa5.03□□□□□ -1.6
PTPN13-202ENST00000411767 RGS6P49758 472 aa5.03□□□□□ -1.6
PTPN13-202ENST00000411767 ZNF699Q32M78 642 aa5.03□□□□□ -1.6
PTPN13-202ENST00000411767 FBXO42Q6P3S6 717 aa5.03□□□□□ -1.6
PTPN13-202ENST00000411767 NANOGNBQ7Z5D8 188 aa5.03□□□□□ -1.6
PTPN13-202ENST00000411767 TRIM69Q86WT6 500 aa5.03□□□□□ -1.6
PTPN13-202ENST00000411767 PALB2Q86YC2 1186 aa5.03□□□□□ -1.6
PTPN13-202ENST00000411767 OMA1Q96E52 524 aa5.03□□□□□ -1.6
PTPN13-202ENST00000411767 TNIP3Q96KP6 325 aa5.03□□□□□ -1.6
PTPN13-202ENST00000411767 PHACTR3Q96KR7 559 aa5.03□□□□□ -1.6
PTPN13-202ENST00000411767 RHOXF2Q9BQY4 288 aa5.03□□□□□ -1.6
PTPN13-202ENST00000411767 ZNF304Q9HCX3 659 aa5.03□□□□□ -1.6
PTPN13-202ENST00000411767 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.02□□□□□ -1.61
PTPN13-202ENST00000411767 NVLO15381 856 aaKnown RBP5.02□□□□□ -1.61
PTPN13-202ENST00000411767 ACADSP16219 412 aa5.02□□□□□ -1.61
PTPN13-202ENST00000411767 HAND2P61296 217 aa5.02□□□□□ -1.61
PTPN13-202ENST00000411767 KRT81Q14533 505 aa5.02□□□□□ -1.61
PTPN13-202ENST00000411767 TEDDM1Q5T9Z0 273 aa5.02□□□□□ -1.61
PTPN13-202ENST00000411767 ATG16L1Q676U5 607 aa5.02□□□□□ -1.61
PTPN13-202ENST00000411767 CAMK1DQ8IU85 385 aa5.02□□□□□ -1.61
PTPN13-202ENST00000411767 SMC5Q8IY18 1101 aa5.02□□□□□ -1.61
PTPN13-202ENST00000411767 NGEFQ8N5V2 710 aa5.02□□□□□ -1.61
PTPN13-202ENST00000411767 RRP36Q96EU6 259 aaKnown RBP5.02□□□□□ -1.61
PTPN13-202ENST00000411767 PPANQ9NQ55 473 aaKnown RBP5.02□□□□□ -1.61
PTPN13-202ENST00000411767 PRDM10Q9NQV6 1147 aa5.02□□□□□ -1.61
PTPN13-202ENST00000411767 KIF17Q9P2E2 1029 aa5.02□□□□□ -1.61
PTPN13-202ENST00000411767 ZNF215Q9UL58 517 aaPredicted RBP5.02□□□□□ -1.61
PTPN13-202ENST00000411767 MORC2Q9Y6X9 1032 aaPredicted RBP5.02□□□□□ -1.61
PTPN13-202ENST00000411767 TMCC1O94876 653 aa5.02□□□□□ -1.61
PTPN13-202ENST00000411767 RBM5P52756 815 aaKnown RBP eCLIP5.02□□□□□ -1.61
PTPN13-202ENST00000411767 KANK4Q5T7N3 995 aaPredicted RBP5.02□□□□□ -1.61
PTPN13-202ENST00000411767 TBC1D1Q86TI0 1168 aaPredicted RBP5.02□□□□□ -1.61
PTPN13-202ENST00000411767 WDR75Q8IWA0 830 aaKnown RBP5.02□□□□□ -1.61
PTPN13-202ENST00000411767 GAS2L2Q8NHY3 880 aa5.02□□□□□ -1.61
PTPN13-202ENST00000411767 CHMP7Q8WUX9 453 aaPredicted RBP5.02□□□□□ -1.61
PTPN13-202ENST00000411767 MAIP1Q8WWC4 291 aa5.02□□□□□ -1.61
PTPN13-202ENST00000411767 TRIM11Q96F44 468 aa5.02□□□□□ -1.61
PTPN13-202ENST00000411767 FGD4Q96M96 766 aa5.02□□□□□ -1.61
PTPN13-202ENST00000411767 PHF23Q9BUL5 403 aaPredicted RBP5.02□□□□□ -1.61
PTPN13-202ENST00000411767 SELENONQ9NZV5 590 aa5.02□□□□□ -1.61
PTPN13-202ENST00000411767 IMPACTQ9P2X3 320 aa5.02□□□□□ -1.61
PTPN13-202ENST00000411767 PARP2Q9UGN5 583 aa5.02□□□□□ -1.61
PTPN13-202ENST00000411767 ANGPTL2Q9UKU9 493 aa5.02□□□□□ -1.61
PTPN13-202ENST00000411767 THAP12O43422 761 aa5.02□□□□□ -1.61
PTPN13-202ENST00000411767 NCAM1P13591 858 aa5.02□□□□□ -1.61
PTPN13-202ENST00000411767 ATF4P18848 351 aaPredicted RBP5.02□□□□□ -1.61
PTPN13-202ENST00000411767 ITGAXP20702 1163 aa5.02□□□□□ -1.61
PTPN13-202ENST00000411767 NFKBIAP25963 317 aa5.02□□□□□ -1.61
PTPN13-202ENST00000411767 KPNA2P52292 529 aaKnown RBP5.02□□□□□ -1.61
PTPN13-202ENST00000411767 ALDH18A1P54886 795 aaKnown RBP5.02□□□□□ -1.61
PTPN13-202ENST00000411767 ARID5AQ03989 594 aa5.02□□□□□ -1.61
PTPN13-202ENST00000411767 PPP2R5CQ13362 524 aa5.02□□□□□ -1.61
PTPN13-202ENST00000411767 CUL4AQ13619 759 aa5.02□□□□□ -1.61
PTPN13-202ENST00000411767 GALNT18Q6P9A2 607 aa5.02□□□□□ -1.61
PTPN13-202ENST00000411767 SNX29Q8TEQ0 813 aa5.02□□□□□ -1.61
PTPN13-202ENST00000411767 TTC17Q96AE7 1141 aa5.02□□□□□ -1.61
PTPN13-202ENST00000411767 TTC25Q96NG3 672 aa5.02□□□□□ -1.61
PTPN13-202ENST00000411767 NEUROD6Q96NK8 337 aa5.02□□□□□ -1.61
PTPN13-202ENST00000411767 PKD2L2Q9NZM6 624 aa5.02□□□□□ -1.61
PTPN13-202ENST00000411767 H3BRJ5 948 aa5.02□□□□□ -1.61
PTPN13-202ENST00000411767 M0R3G1 203 aa5.02□□□□□ -1.61
PTPN13-202ENST00000411767 PTPN1P18031 435 aaKnown RBP5.02□□□□□ -1.61
PTPN13-202ENST00000411767 TTLL7Q6ZT98 887 aa5.02□□□□□ -1.61
PTPN13-202ENST00000411767 TRIM59Q8IWR1 403 aa5.02□□□□□ -1.61
PTPN13-202ENST00000411767 ARHGAP45Q92619 1136 aa5.02□□□□□ -1.61
PTPN13-202ENST00000411767 PRPF18Q99633 342 aaKnown RBP5.02□□□□□ -1.61
PTPN13-202ENST00000411767 ABCF2Q9UG63 623 aa5.02□□□□□ -1.61
PTPN13-202ENST00000411767 FIBPO43427 364 aa5.02□□□□□ -1.61
PTPN13-202ENST00000411767 AKAP5P24588 427 aa5.02□□□□□ -1.61
PTPN13-202ENST00000411767 ACADLP28330 430 aa5.02□□□□□ -1.61
PTPN13-202ENST00000411767 ARHGDIBP52566 201 aa5.02□□□□□ -1.61
PTPN13-202ENST00000411767 NNTQ13423 1086 aa5.02□□□□□ -1.61
PTPN13-202ENST00000411767 ZNF394Q53GI3 561 aa5.02□□□□□ -1.61
PTPN13-202ENST00000411767 MFSD4BQ5TF39 518 aa5.02□□□□□ -1.61
PTPN13-202ENST00000411767 SLC25A24Q6NUK1 477 aa5.02□□□□□ -1.61
PTPN13-202ENST00000411767 SERPINI1Q99574 410 aa5.02□□□□□ -1.61
PTPN13-202ENST00000411767 PACSIN1Q9BY11 444 aa5.02□□□□□ -1.61
PTPN13-202ENST00000411767 CUEDC2Q9H467 287 aa5.02□□□□□ -1.61
PTPN13-202ENST00000411767 RNF14Q9UBS8 474 aa5.02□□□□□ -1.61
PTPN13-202ENST00000411767 CHIC2Q9UKJ5 165 aa5.02□□□□□ -1.61
PTPN13-202ENST00000411767 SART1O43290 800 aaKnown RBP5.02□□□□□ -1.61
PTPN13-202ENST00000411767 CALML3P27482 149 aa5.02□□□□□ -1.61
PTPN13-202ENST00000411767 S100A5P33763 92 aa5.02□□□□□ -1.61
PTPN13-202ENST00000411767 RGL3Q3MIN7 710 aa5.02□□□□□ -1.61
PTPN13-202ENST00000411767 PLEKHA7Q6IQ23 1121 aa5.02□□□□□ -1.61
PTPN13-202ENST00000411767 RETREG2Q8NC44 543 aa5.02□□□□□ -1.61
PTPN13-202ENST00000411767 TRIM6Q9C030 488 aaPredicted RBP5.02□□□□□ -1.61
PTPN13-202ENST00000411767 KRT38O76015 456 aa5.02□□□□□ -1.61
PTPN13-202ENST00000411767 POLR3DP05423 398 aaPredicted RBP5.02□□□□□ -1.61
PTPN13-202ENST00000411767 IMPDH2P12268 514 aa5.02□□□□□ -1.61
PTPN13-202ENST00000411767 PRKCQQ04759 706 aa5.02□□□□□ -1.61
PTPN13-202ENST00000411767 TTF1Q15361 905 aaPredicted RBP5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms