RNA–Protein interactions for RNA: ENST00000400214.2

HMGB3P7-201, Transcript of high mobility group box 3 pseudogene 7, humanhuman

BASIC

Gene HMGB3P7, Length 611 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P7-201ENST00000400214 BTBD11A6QL63 1104 aa6.5□□□□□ -1.37
HMGB3P7-201ENST00000400214 TCERG1O14776 1098 aaKnown RBP6.5□□□□□ -1.37
HMGB3P7-201ENST00000400214 PPEF1O14829 653 aaPredicted RBP6.5□□□□□ -1.37
HMGB3P7-201ENST00000400214 PDE8AO60658 829 aa6.5□□□□□ -1.37
HMGB3P7-201ENST00000400214 RPS6KA4O75676 772 aa6.5□□□□□ -1.37
HMGB3P7-201ENST00000400214 TCEA3O75764 348 aa6.5□□□□□ -1.37
HMGB3P7-201ENST00000400214 S1PR4O95977 384 aa6.5□□□□□ -1.37
HMGB3P7-201ENST00000400214 SRGNP10124 158 aa6.5□□□□□ -1.37
HMGB3P7-201ENST00000400214 CYP19A1P11511 503 aaPredicted RBP6.5□□□□□ -1.37
HMGB3P7-201ENST00000400214 GBP2P32456 591 aaPredicted RBP6.5□□□□□ -1.37
HMGB3P7-201ENST00000400214 ZAP70P43403 619 aa6.5□□□□□ -1.37
HMGB3P7-201ENST00000400214 CRKLP46109 303 aaKnown RBP6.5□□□□□ -1.37
HMGB3P7-201ENST00000400214 SCNN1DP51172 638 aa6.5□□□□□ -1.37
HMGB3P7-201ENST00000400214 APOBRQ0VD83 1088 aa6.5□□□□□ -1.37
HMGB3P7-201ENST00000400214 TAF7Q15545 349 aaPredicted RBP6.5□□□□□ -1.37
HMGB3P7-201ENST00000400214 CCDC70Q6NSX1 233 aa6.5□□□□□ -1.37
HMGB3P7-201ENST00000400214 KANK3Q6NY19 840 aa6.5□□□□□ -1.37
HMGB3P7-201ENST00000400214 FBXL19Q6PCT2 694 aa6.5□□□□□ -1.37
HMGB3P7-201ENST00000400214 NXPE4Q6UWF7 544 aa6.5□□□□□ -1.37
HMGB3P7-201ENST00000400214 MCM10Q7L590 875 aa6.5□□□□□ -1.37
HMGB3P7-201ENST00000400214 RNF180Q86T96 592 aa6.5□□□□□ -1.37
HMGB3P7-201ENST00000400214 RELL1Q8IUW5 271 aa6.5□□□□□ -1.37
HMGB3P7-201ENST00000400214 TCEAL8Q8IYN2 117 aa6.5□□□□□ -1.37
HMGB3P7-201ENST00000400214 NOC4LQ9BVI4 516 aaKnown RBP6.5□□□□□ -1.37
HMGB3P7-201ENST00000400214 TEX13AQ9BXU3 409 aaPredicted RBP6.5□□□□□ -1.37
HMGB3P7-201ENST00000400214 BABAM1Q9NWV8 329 aa6.5□□□□□ -1.37
HMGB3P7-201ENST00000400214 ACTR10Q9NZ32 417 aa6.5□□□□□ -1.37
HMGB3P7-201ENST00000400214 UBP1Q9NZI7 540 aa6.5□□□□□ -1.37
HMGB3P7-201ENST00000400214 PKD2L1Q9P0L9 805 aa6.5□□□□□ -1.37
HMGB3P7-201ENST00000400214 LUZP4Q9P127 313 aa6.5□□□□□ -1.37
HMGB3P7-201ENST00000400214 AFDNP55196 1824 aaKnown RBP6.5□□□□□ -1.37
HMGB3P7-201ENST00000400214 BCORQ6W2J9 1755 aa6.49□□□□□ -1.37
HMGB3P7-201ENST00000400214 CHD4Q14839 1912 aa6.49□□□□□ -1.37
HMGB3P7-201ENST00000400214 NUP98P52948 1817 aa6.49□□□□□ -1.37
HMGB3P7-201ENST00000400214 MAGEB6P1A0A0J9YX57 407 aa6.49□□□□□ -1.37
HMGB3P7-201ENST00000400214 ZBTB7AO95365 584 aa6.49□□□□□ -1.37
HMGB3P7-201ENST00000400214 CCNYL3P0C7X3 344 aa6.49□□□□□ -1.37
HMGB3P7-201ENST00000400214 RIPK4P57078 832 aa6.49□□□□□ -1.37
HMGB3P7-201ENST00000400214 PIN1Q13526 163 aaPredicted RBP6.49□□□□□ -1.37
HMGB3P7-201ENST00000400214 DCTN1Q14203 1278 aa6.49□□□□□ -1.37
HMGB3P7-201ENST00000400214 SLC4A8Q2Y0W8 1093 aa6.49□□□□□ -1.37
HMGB3P7-201ENST00000400214 C8orf34Q49A92 452 aa6.49□□□□□ -1.37
HMGB3P7-201ENST00000400214 ALFQ53S48 1182 aa6.49□□□□□ -1.37
HMGB3P7-201ENST00000400214 FAM102BQ5T8I3 360 aa6.49□□□□□ -1.37
HMGB3P7-201ENST00000400214 ANO1Q5XXA6 986 aa6.49□□□□□ -1.37
HMGB3P7-201ENST00000400214 INTS5Q6P9B9 1019 aaKnown RBP6.49□□□□□ -1.37
HMGB3P7-201ENST00000400214 BRICD5Q6PL45 260 aa6.49□□□□□ -1.37
HMGB3P7-201ENST00000400214 DGKHQ86XP1 1220 aa6.49□□□□□ -1.37
HMGB3P7-201ENST00000400214 TTC5Q8N0Z6 440 aa6.49□□□□□ -1.37
HMGB3P7-201ENST00000400214 SECISBP2LQ93073 1101 aaKnown RBP6.49□□□□□ -1.37
HMGB3P7-201ENST00000400214 HOOK2Q96ED9 719 aa6.49□□□□□ -1.37
HMGB3P7-201ENST00000400214 MYO19Q96H55 970 aa6.49□□□□□ -1.37
HMGB3P7-201ENST00000400214 ZNF496Q96IT1 587 aaPredicted RBP6.49□□□□□ -1.37
HMGB3P7-201ENST00000400214 TMEM74Q96NL1 305 aa6.49□□□□□ -1.37
HMGB3P7-201ENST00000400214 FMNL2Q96PY5 1086 aa6.49□□□□□ -1.37
HMGB3P7-201ENST00000400214 NGRNQ9NPE2 291 aaKnown RBP6.49□□□□□ -1.37
HMGB3P7-201ENST00000400214 ZNF69Q9UC07 566 aa6.49□□□□□ -1.37
HMGB3P7-201ENST00000400214 SERTAD1Q9UHV2 236 aa6.49□□□□□ -1.37
HMGB3P7-201ENST00000400214 PPT2Q9UMR5 302 aa6.49□□□□□ -1.37
HMGB3P7-201ENST00000400214 NRXN2Q9P2S2 1712 aa6.48□□□□□ -1.37
HMGB3P7-201ENST00000400214 BRCA1P38398 1863 aaKnown RBP6.48□□□□□ -1.37
HMGB3P7-201ENST00000400214 TMEM238LA0A1B0GVL6 79 aa6.48□□□□□ -1.37
HMGB3P7-201ENST00000400214 BACH1O14867 736 aa6.48□□□□□ -1.37
HMGB3P7-201ENST00000400214 RNASEH2AO75792 299 aaKnown RBP6.48□□□□□ -1.37
HMGB3P7-201ENST00000400214 MYCP01106 439 aaPredicted RBP6.48□□□□□ -1.37
HMGB3P7-201ENST00000400214 SCTRP47872 440 aa6.48□□□□□ -1.37
HMGB3P7-201ENST00000400214 SMCPP49901 116 aaPredicted RBP6.48□□□□□ -1.37
HMGB3P7-201ENST00000400214 GDF10P55107 478 aa6.48□□□□□ -1.37
HMGB3P7-201ENST00000400214 MAP3K10Q02779 954 aa6.48□□□□□ -1.37
HMGB3P7-201ENST00000400214 PWP1Q13610 501 aa6.48□□□□□ -1.37
HMGB3P7-201ENST00000400214 CTC1Q2NKJ3 1217 aa6.48□□□□□ -1.37
HMGB3P7-201ENST00000400214 GFOD2Q3B7J2 385 aa6.48□□□□□ -1.37
HMGB3P7-201ENST00000400214 PLA2G2CQ5R387 149 aa6.48□□□□□ -1.37
HMGB3P7-201ENST00000400214 PERM1Q5SV97 790 aa6.48□□□□□ -1.37
HMGB3P7-201ENST00000400214 TRAPPC3LQ5T215 181 aa6.48□□□□□ -1.37
HMGB3P7-201ENST00000400214 LARP1BQ659C4 914 aaKnown RBP6.48□□□□□ -1.37
HMGB3P7-201ENST00000400214 NXNQ6DKJ4 435 aa6.48□□□□□ -1.37
HMGB3P7-201ENST00000400214 DNAJC10Q8IXB1 793 aa6.48□□□□□ -1.37
HMGB3P7-201ENST00000400214 AFAP1L2Q8N4X5 818 aa6.48□□□□□ -1.37
HMGB3P7-201ENST00000400214 MAGEB6Q8N7X4 407 aa6.48□□□□□ -1.37
HMGB3P7-201ENST00000400214 CCDC89Q8N998 374 aa6.48□□□□□ -1.37
HMGB3P7-201ENST00000400214 ANKRD42Q8N9B4 389 aa6.48□□□□□ -1.37
HMGB3P7-201ENST00000400214 MUC3BQ9H195 1237 aa6.48□□□□□ -1.37
HMGB3P7-201ENST00000400214 AASDHPPTQ9NRN7 309 aa6.48□□□□□ -1.37
HMGB3P7-201ENST00000400214 RTCBQ9Y3I0 505 aaKnown RBP6.48□□□□□ -1.37
HMGB3P7-201ENST00000400214 SCN7AQ01118 1682 aa6.48□□□□□ -1.37
HMGB3P7-201ENST00000400214 SOS1Q07889 1333 aaPredicted RBP6.48□□□□□ -1.37
HMGB3P7-201ENST00000400214 KIAA1551Q9HCM1 1747 aa6.47□□□□□ -1.37
HMGB3P7-201ENST00000400214 GOLGB1Q14789 3259 aaKnown RBP6.47□□□□□ -1.37
HMGB3P7-201ENST00000400214 CHL1O00533 1208 aa6.47□□□□□ -1.37
HMGB3P7-201ENST00000400214 KCNQ3O43525 872 aa6.47□□□□□ -1.37
HMGB3P7-201ENST00000400214 STARD3NLO95772 234 aa6.47□□□□□ -1.37
HMGB3P7-201ENST00000400214 SNRPA1P09661 255 aaKnown RBP6.47□□□□□ -1.37
HMGB3P7-201ENST00000400214 VDRP11473 427 aa6.47□□□□□ -1.37
HMGB3P7-201ENST00000400214 SERPINB3P29508 390 aa6.47□□□□□ -1.37
HMGB3P7-201ENST00000400214 EIF5P55010 431 aaKnown RBP6.47□□□□□ -1.37
HMGB3P7-201ENST00000400214 FAM160A1Q05DH4 1040 aa6.47□□□□□ -1.37
HMGB3P7-201ENST00000400214 SSRP1Q08945 709 aaKnown RBP6.47□□□□□ -1.37
HMGB3P7-201ENST00000400214 MTMR1Q13613 665 aa6.47□□□□□ -1.37
HMGB3P7-201ENST00000400214 KMT5BQ4FZB7 885 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms