RNA–Protein interactions for RNA: ENST00000399352.5

ITSN1-209, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-209ENST00000399352 ADCY1Q08828 1119 aa17.73■□□□□ 0.43
ITSN1-209ENST00000399352 ZKSCAN8Q15776 578 aaPredicted RBP17.73■□□□□ 0.43
ITSN1-209ENST00000399352 TPCN1Q9ULQ1 816 aa17.73■□□□□ 0.43
ITSN1-209ENST00000399352 PCDHA7Q9UN72 937 aa17.73■□□□□ 0.43
ITSN1-209ENST00000399352 ITGA6P23229 1130 aa17.73■□□□□ 0.43
ITSN1-209ENST00000399352 EHHADHQ08426 723 aa17.73■□□□□ 0.43
ITSN1-209ENST00000399352 CLIC6Q96NY7 704 aa17.73■□□□□ 0.43
ITSN1-209ENST00000399352 DENND2AQ9ULE3 1009 aa17.73■□□□□ 0.43
ITSN1-209ENST00000399352 SNAPC4Q5SXM2 1469 aa17.73■□□□□ 0.43
ITSN1-209ENST00000399352 EEF2KMTQ96G04 330 aa17.72■□□□□ 0.43
ITSN1-209ENST00000399352 SCYL3Q8IZE3 742 aa17.72■□□□□ 0.43
ITSN1-209ENST00000399352 ABTB1Q969K4 478 aaPredicted RBP17.72■□□□□ 0.43
ITSN1-209ENST00000399352 CASP14P31944 242 aa17.72■□□□□ 0.43
ITSN1-209ENST00000399352 PHBP35232 272 aa17.72■□□□□ 0.43
ITSN1-209ENST00000399352 APBA1Q02410 837 aa17.72■□□□□ 0.43
ITSN1-209ENST00000399352 B4DLN1 442 aa17.72■□□□□ 0.43
ITSN1-209ENST00000399352 XRCC5P13010 732 aaKnown RBP17.72■□□□□ 0.43
ITSN1-209ENST00000399352 COBLO75128 1261 aa17.71■□□□□ 0.43
ITSN1-209ENST00000399352 POLR2FP61218 127 aaKnown RBP17.71■□□□□ 0.43
ITSN1-209ENST00000399352 PTH1RQ03431 593 aa17.71■□□□□ 0.43
ITSN1-209ENST00000399352 CACTINQ8WUQ7 758 aaKnown RBP17.71■□□□□ 0.43
ITSN1-209ENST00000399352 TESK2Q96S53 571 aa17.71■□□□□ 0.43
ITSN1-209ENST00000399352 ATP8B1O43520 1251 aa17.71■□□□□ 0.43
ITSN1-209ENST00000399352 RBM26Q5T8P6 1007 aaKnown RBP17.71■□□□□ 0.43
ITSN1-209ENST00000399352 PDZD8Q8NEN9 1154 aa17.71■□□□□ 0.43
ITSN1-209ENST00000399352 POLE2P56282 527 aa17.71■□□□□ 0.43
ITSN1-209ENST00000399352 GABPAQ06546 454 aa17.71■□□□□ 0.43
ITSN1-209ENST00000399352 N4BP2L2Q92802 583 aaPredicted RBP17.71■□□□□ 0.43
ITSN1-209ENST00000399352 FLT4P35916 1363 aa17.71■□□□□ 0.43
ITSN1-209ENST00000399352 KRT19P08727 400 aa17.71■□□□□ 0.43
ITSN1-209ENST00000399352 CYP2J2P51589 502 aa17.71■□□□□ 0.43
ITSN1-209ENST00000399352 RCN2Q14257 317 aa17.71■□□□□ 0.43
ITSN1-209ENST00000399352 SPDL1Q96EA4 605 aa17.71■□□□□ 0.43
ITSN1-209ENST00000399352 SUCLG2Q96I99 432 aa17.71■□□□□ 0.43
ITSN1-209ENST00000399352 CMA1P23946 247 aa17.7■□□□□ 0.42
ITSN1-209ENST00000399352 FAM133BQ5BKY9 247 aaKnown RBP17.7■□□□□ 0.42
ITSN1-209ENST00000399352 ATF7P17544 494 aaPredicted RBP17.7■□□□□ 0.42
ITSN1-209ENST00000399352 GINS2Q9Y248 185 aa17.7■□□□□ 0.42
ITSN1-209ENST00000399352 PPP2R5EQ16537 467 aa17.7■□□□□ 0.42
ITSN1-209ENST00000399352 NOSTRINQ8IVI9 506 aa17.7■□□□□ 0.42
ITSN1-209ENST00000399352 MRPL46Q9H2W6 279 aaKnown RBP17.7■□□□□ 0.42
ITSN1-209ENST00000399352 AATFQ9NY61 560 aaKnown RBP eCLIP17.7■□□□□ 0.42
ITSN1-209ENST00000399352 HNRNPH2P55795 449 aaKnown RBP17.7■□□□□ 0.42
ITSN1-209ENST00000399352 GRK7Q8WTQ7 553 aa17.7■□□□□ 0.42
ITSN1-209ENST00000399352 ADGRL1O94910 1474 aa17.7■□□□□ 0.42
ITSN1-209ENST00000399352 PLB1Q6P1J6 1458 aa17.7■□□□□ 0.42
ITSN1-209ENST00000399352 ANKRD65E5RJM6 399 aa17.69■□□□□ 0.42
ITSN1-209ENST00000399352 RASSF7Q02833 373 aa17.69■□□□□ 0.42
ITSN1-209ENST00000399352 PUM3Q15397 648 aaKnown RBP17.69■□□□□ 0.42
ITSN1-209ENST00000399352 SPATA1Q5VX52 437 aa17.69■□□□□ 0.42
ITSN1-209ENST00000399352 TPTE2Q6XPS3 522 aa17.69■□□□□ 0.42
ITSN1-209ENST00000399352 MYOCDQ8IZQ8 938 aa17.69■□□□□ 0.42
ITSN1-209ENST00000399352 KLHL29Q96CT2 875 aa17.69■□□□□ 0.42
ITSN1-209ENST00000399352 HVCN1Q96D96 273 aa17.69■□□□□ 0.42
ITSN1-209ENST00000399352 ANKRD2Q9GZV1 360 aa17.69■□□□□ 0.42
ITSN1-209ENST00000399352 TRIM35Q9UPQ4 493 aa17.69■□□□□ 0.42
ITSN1-209ENST00000399352 CD2APQ9Y5K6 639 aa17.69■□□□□ 0.42
ITSN1-209ENST00000399352 A0A087WWV3 80 aa17.69■□□□□ 0.42
ITSN1-209ENST00000399352 GNA14O95837 355 aa17.69■□□□□ 0.42
ITSN1-209ENST00000399352 CLCN6P51797 869 aa17.69■□□□□ 0.42
ITSN1-209ENST00000399352 RBM6P78332 1123 aaKnown RBP17.69■□□□□ 0.42
ITSN1-209ENST00000399352 ARHGAP4P98171 946 aa17.69■□□□□ 0.42
ITSN1-209ENST00000399352 POC1B-GALNT4F8VUJ3 575 aa17.69■□□□□ 0.42
ITSN1-209ENST00000399352 MYCLP12524 364 aaPredicted RBP17.69■□□□□ 0.42
ITSN1-209ENST00000399352 ZAP70P43403 619 aa17.69■□□□□ 0.42
ITSN1-209ENST00000399352 CCDC117Q8IWD4 279 aaPredicted RBP17.69■□□□□ 0.42
ITSN1-209ENST00000399352 TDRD7Q8NHU6 1098 aaKnown RBP17.69■□□□□ 0.42
ITSN1-209ENST00000399352 RAB20Q9NX57 234 aa17.69■□□□□ 0.42
ITSN1-209ENST00000399352 PLCH2O75038 1416 aa17.69■□□□□ 0.42
ITSN1-209ENST00000399352 PRAG1Q86YV5 1406 aa17.69■□□□□ 0.42
ITSN1-209ENST00000399352 RNMTO43148 476 aaKnown RBP17.69■□□□□ 0.42
ITSN1-209ENST00000399352 PPFIA2O75334 1257 aa17.69■□□□□ 0.42
ITSN1-209ENST00000399352 HSP90AA5PQ58FG0 334 aa17.69■□□□□ 0.42
ITSN1-209ENST00000399352 EPB41L5Q9HCM4 733 aa17.69■□□□□ 0.42
ITSN1-209ENST00000399352 FNBP4Q8N3X1 1017 aaPredicted RBP17.69■□□□□ 0.42
ITSN1-209ENST00000399352 METTL22Q9BUU2 404 aaPredicted RBP17.69■□□□□ 0.42
ITSN1-209ENST00000399352 PTPN22Q9Y2R2 807 aa17.69■□□□□ 0.42
ITSN1-209ENST00000399352 ZNF532Q9HCE3 1301 aa17.69■□□□□ 0.42
ITSN1-209ENST00000399352 WDR46O15213 610 aaKnown RBP17.68■□□□□ 0.42
ITSN1-209ENST00000399352 SART1O43290 800 aaKnown RBP17.68■□□□□ 0.42
ITSN1-209ENST00000399352 ATF2P15336 505 aa17.68■□□□□ 0.42
ITSN1-209ENST00000399352 USH1GQ495M9 461 aa17.68■□□□□ 0.42
ITSN1-209ENST00000399352 H2AFZP0C0S5 128 aa17.68■□□□□ 0.42
ITSN1-209ENST00000399352 TNNI1P19237 187 aa17.68■□□□□ 0.42
ITSN1-209ENST00000399352 TAF11Q15544 211 aa17.68■□□□□ 0.42
ITSN1-209ENST00000399352 H2AFVQ71UI9 128 aa17.68■□□□□ 0.42
ITSN1-209ENST00000399352 PARD6BQ9BYG5 372 aa17.68■□□□□ 0.42
ITSN1-209ENST00000399352 NYXQ9GZU5 481 aa17.68■□□□□ 0.42
ITSN1-209ENST00000399352 ST7Q9NRC1 585 aa17.68■□□□□ 0.42
ITSN1-209ENST00000399352 CLIC4Q9Y696 253 aa17.68■□□□□ 0.42
ITSN1-209ENST00000399352 USP19O94966 1318 aa17.68■□□□□ 0.42
ITSN1-209ENST00000399352 H7C1D1 291 aa17.68■□□□□ 0.42
ITSN1-209ENST00000399352 ZYXQ15942 572 aaKnown RBP17.68■□□□□ 0.42
ITSN1-209ENST00000399352 BIN2Q9UBW5 565 aaPredicted RBP17.68■□□□□ 0.42
ITSN1-209ENST00000399352 HEXIM1O94992 359 aaKnown RBP17.68■□□□□ 0.42
ITSN1-209ENST00000399352 CCDC125Q86Z20 511 aa17.68■□□□□ 0.42
ITSN1-209ENST00000399352 PER1O15534 1290 aaPredicted RBP17.67■□□□□ 0.42
ITSN1-209ENST00000399352 ADD1P35611 737 aaKnown RBP17.67■□□□□ 0.42
ITSN1-209ENST00000399352 CUL4BQ13620 913 aa17.67■□□□□ 0.42
ITSN1-209ENST00000399352 REXO1Q8N1G1 1221 aaKnown RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms