RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 SLURP2P0DP57 97 aa11.79□□□□□ -0.52
CPSF1P1-201ENST00000397477 CACNB3P54284 484 aa11.79□□□□□ -0.52
CPSF1P1-201ENST00000397477 GPSM2P81274 684 aa11.79□□□□□ -0.52
CPSF1P1-201ENST00000397477 COA7Q96BR5 231 aa11.79□□□□□ -0.52
CPSF1P1-201ENST00000397477 ZC3H12CQ9C0D7 883 aaKnown RBP11.79□□□□□ -0.52
CPSF1P1-201ENST00000397477 FAM196BA6NMK8 535 aa11.79□□□□□ -0.52
CPSF1P1-201ENST00000397477 ARHGAP6O43182 974 aa11.79□□□□□ -0.52
CPSF1P1-201ENST00000397477 MTIF2P46199 727 aaKnown RBP11.79□□□□□ -0.52
CPSF1P1-201ENST00000397477 DNA2P51530 1060 aa11.79□□□□□ -0.52
CPSF1P1-201ENST00000397477 ERO1AQ96HE7 468 aa11.79□□□□□ -0.52
CPSF1P1-201ENST00000397477 TMEM47Q9BQJ4 181 aa11.79□□□□□ -0.52
CPSF1P1-201ENST00000397477 BPIFA3Q9BQP9 254 aa11.79□□□□□ -0.52
CPSF1P1-201ENST00000397477 ZNF287Q9HBT7 754 aa11.79□□□□□ -0.52
CPSF1P1-201ENST00000397477 ARGLU1Q9NWB6 273 aaPredicted RBP11.79□□□□□ -0.52
CPSF1P1-201ENST00000397477 KIF5CO60282 957 aa11.78□□□□□ -0.52
CPSF1P1-201ENST00000397477 SLC16A2P36021 539 aa11.78□□□□□ -0.52
CPSF1P1-201ENST00000397477 PPP2R5BQ15173 497 aa11.78□□□□□ -0.52
CPSF1P1-201ENST00000397477 TRMT1LQ7Z2T5 733 aaKnown RBP11.78□□□□□ -0.52
CPSF1P1-201ENST00000397477 SLF1Q9BQI6 1058 aa11.78□□□□□ -0.52
CPSF1P1-201ENST00000397477 N4BP2Q86UW6 1770 aaPredicted RBP11.78□□□□□ -0.52
CPSF1P1-201ENST00000397477 IPO7O95373 1038 aaKnown RBP11.78□□□□□ -0.52
CPSF1P1-201ENST00000397477 NAP1L1P55209 391 aaKnown RBP11.78□□□□□ -0.52
CPSF1P1-201ENST00000397477 PAK1Q13153 545 aa11.78□□□□□ -0.52
CPSF1P1-201ENST00000397477 GRAPQ13588 217 aa11.78□□□□□ -0.52
CPSF1P1-201ENST00000397477 GRAPLQ8TC17 118 aaPredicted RBP11.78□□□□□ -0.52
CPSF1P1-201ENST00000397477 ENOX1Q8TC92 643 aaKnown RBP11.78□□□□□ -0.52
CPSF1P1-201ENST00000397477 RRP36Q96EU6 259 aaKnown RBP11.78□□□□□ -0.52
CPSF1P1-201ENST00000397477 PIGSQ96S52 555 aa11.78□□□□□ -0.52
CPSF1P1-201ENST00000397477 GUCA1BQ9UMX6 200 aa11.78□□□□□ -0.52
CPSF1P1-201ENST00000397477 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.78□□□□□ -0.52
CPSF1P1-201ENST00000397477 GOLGB1Q14789 3259 aaKnown RBP11.78□□□□□ -0.52
CPSF1P1-201ENST00000397477 CRYBG1Q9Y4K1 1723 aa11.78□□□□□ -0.52
CPSF1P1-201ENST00000397477 CNTNAP5Q8WYK1 1306 aa11.78□□□□□ -0.52
CPSF1P1-201ENST00000397477 CCDC175P0C221 793 aa11.78□□□□□ -0.52
CPSF1P1-201ENST00000397477 GNAQP50148 359 aa11.78□□□□□ -0.52
CPSF1P1-201ENST00000397477 MORC3Q14149 939 aa11.78□□□□□ -0.52
CPSF1P1-201ENST00000397477 SPATA1Q5VX52 437 aa11.78□□□□□ -0.52
CPSF1P1-201ENST00000397477 CCDC148Q8NFR7 591 aa11.78□□□□□ -0.52
CPSF1P1-201ENST00000397477 HPS3Q969F9 1004 aa11.78□□□□□ -0.52
CPSF1P1-201ENST00000397477 SHISA4Q96DD7 197 aa11.78□□□□□ -0.52
CPSF1P1-201ENST00000397477 XDHP47989 1333 aa11.77□□□□□ -0.52
CPSF1P1-201ENST00000397477 KRT9P35527 623 aa11.77□□□□□ -0.52
CPSF1P1-201ENST00000397477 FBXO38Q6PIJ6 1188 aa11.77□□□□□ -0.52
CPSF1P1-201ENST00000397477 TMCO3Q6UWJ1 677 aa11.77□□□□□ -0.52
CPSF1P1-201ENST00000397477 HINFPQ9BQA5 517 aa11.77□□□□□ -0.52
CPSF1P1-201ENST00000397477 SRRTQ9BXP5 876 aaKnown RBP11.77□□□□□ -0.52
CPSF1P1-201ENST00000397477 PARP4Q9UKK3 1724 aaKnown RBP11.77□□□□□ -0.52
CPSF1P1-201ENST00000397477 FAM205AQ6ZU69 1335 aa11.77□□□□□ -0.53
CPSF1P1-201ENST00000397477 RPN1P04843 607 aaKnown RBP11.77□□□□□ -0.53
CPSF1P1-201ENST00000397477 CDK8P49336 464 aa11.77□□□□□ -0.53
CPSF1P1-201ENST00000397477 PDE4DQ08499 809 aa11.77□□□□□ -0.53
CPSF1P1-201ENST00000397477 PFKFB3Q16875 520 aaPredicted RBP11.77□□□□□ -0.53
CPSF1P1-201ENST00000397477 WWC2Q6AWC2 1192 aa11.77□□□□□ -0.53
CPSF1P1-201ENST00000397477 DPP8Q6V1X1 898 aaPredicted RBP11.77□□□□□ -0.53
CPSF1P1-201ENST00000397477 ACRBPQ8NEB7 543 aa11.77□□□□□ -0.53
CPSF1P1-201ENST00000397477 ZNF397Q8NF99 534 aaPredicted RBP11.77□□□□□ -0.53
CPSF1P1-201ENST00000397477 DRC1Q96MC2 740 aa11.77□□□□□ -0.53
CPSF1P1-201ENST00000397477 TMEM60Q9H2L4 133 aa11.77□□□□□ -0.53
CPSF1P1-201ENST00000397477 CD209Q9NNX6 404 aa11.77□□□□□ -0.53
CPSF1P1-201ENST00000397477 EXOC1Q9NV70 894 aa11.77□□□□□ -0.53
CPSF1P1-201ENST00000397477 KRT18P05783 430 aaKnown RBP11.77□□□□□ -0.53
CPSF1P1-201ENST00000397477 TRIM21P19474 475 aaKnown RBP11.77□□□□□ -0.53
CPSF1P1-201ENST00000397477 C12orf60Q5U649 245 aa11.77□□□□□ -0.53
CPSF1P1-201ENST00000397477 C6orf50Q9HD87 102 aa11.77□□□□□ -0.53
CPSF1P1-201ENST00000397477 TMEM260Q9NX78 707 aa11.77□□□□□ -0.53
CPSF1P1-201ENST00000397477 TBC1D7Q9P0N9 293 aa11.77□□□□□ -0.53
CPSF1P1-201ENST00000397477 TTF2Q9UNY4 1162 aaKnown RBP11.77□□□□□ -0.53
CPSF1P1-201ENST00000397477 NYAP1Q6ZVC0 841 aa11.76□□□□□ -0.53
CPSF1P1-201ENST00000397477 KLHL34Q8N239 644 aa11.76□□□□□ -0.53
CPSF1P1-201ENST00000397477 GJA10Q969M2 543 aa11.76□□□□□ -0.53
CPSF1P1-201ENST00000397477 WDR24Q96S15 920 aa11.76□□□□□ -0.53
CPSF1P1-201ENST00000397477 PCDHA4Q9UN74 947 aa11.76□□□□□ -0.53
CPSF1P1-201ENST00000397477 USP17L5A8MUK1 530 aa11.76□□□□□ -0.53
CPSF1P1-201ENST00000397477 SEMA3EO15041 775 aa11.76□□□□□ -0.53
CPSF1P1-201ENST00000397477 SEC31AO94979 1220 aaKnown RBP11.76□□□□□ -0.53
CPSF1P1-201ENST00000397477 GTF2F1P35269 517 aaKnown RBP eCLIP11.76□□□□□ -0.53
CPSF1P1-201ENST00000397477 TYW1BQ6NUM6 668 aa11.76□□□□□ -0.53
CPSF1P1-201ENST00000397477 KIAA1328Q86T90 577 aa11.76□□□□□ -0.53
CPSF1P1-201ENST00000397477 SEPT12Q8IYM1 358 aa11.76□□□□□ -0.53
CPSF1P1-201ENST00000397477 CEP95Q96GE4 821 aa11.76□□□□□ -0.53
CPSF1P1-201ENST00000397477 IL17RBQ9NRM6 502 aa11.76□□□□□ -0.53
CPSF1P1-201ENST00000397477 INTS13Q9NVM9 706 aa11.76□□□□□ -0.53
CPSF1P1-201ENST00000397477 PSDA5PKW4 1024 aaPredicted RBP11.76□□□□□ -0.53
CPSF1P1-201ENST00000397477 KCNJ18B7U540 433 aa11.76□□□□□ -0.53
CPSF1P1-201ENST00000397477 RHOXF2BP0C7M4 288 aa11.76□□□□□ -0.53
CPSF1P1-201ENST00000397477 KCNJ12Q14500 433 aa11.76□□□□□ -0.53
CPSF1P1-201ENST00000397477 SKIDA1Q1XH10 827 aa11.76□□□□□ -0.53
CPSF1P1-201ENST00000397477 KMT5BQ4FZB7 885 aa11.76□□□□□ -0.53
CPSF1P1-201ENST00000397477 PRR5LQ6MZQ0 368 aa11.76□□□□□ -0.53
CPSF1P1-201ENST00000397477 KIAA0825Q8IV33 1275 aa11.76□□□□□ -0.53
CPSF1P1-201ENST00000397477 RBM17Q96I25 401 aaKnown RBP11.76□□□□□ -0.53
CPSF1P1-201ENST00000397477 RHOXF2Q9BQY4 288 aa11.76□□□□□ -0.53
CPSF1P1-201ENST00000397477 HSD3B7Q9H2F3 369 aa11.76□□□□□ -0.53
CPSF1P1-201ENST00000397477 ANAPC4Q9UJX5 808 aa11.76□□□□□ -0.53
CPSF1P1-201ENST00000397477 PSMA7O14818 248 aa11.75□□□□□ -0.53
CPSF1P1-201ENST00000397477 CABP7Q86V35 215 aa11.75□□□□□ -0.53
CPSF1P1-201ENST00000397477 SLC39A2Q9NP94 309 aa11.75□□□□□ -0.53
CPSF1P1-201ENST00000397477 A0A0U1RQJ8 604 aa11.75□□□□□ -0.53
CPSF1P1-201ENST00000397477 SNAP25P60880 206 aa11.75□□□□□ -0.53
CPSF1P1-201ENST00000397477 NONOQ15233 471 aaKnown RBP eCLIP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms