RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 APBA2Q99767 749 aa20.56■□□□□ 0.88
TNFSF13-205ENST00000396545 A0A1W2PPC1 479 aa20.55■□□□□ 0.88
TNFSF13-205ENST00000396545 ADD2P35612 726 aa20.55■□□□□ 0.88
TNFSF13-205ENST00000396545 EVX2Q03828 476 aa20.55■□□□□ 0.88
TNFSF13-205ENST00000396545 CACNB2Q08289 660 aaPredicted RBP20.55■□□□□ 0.88
TNFSF13-205ENST00000396545 CCL14Q16627 93 aa20.55■□□□□ 0.88
TNFSF13-205ENST00000396545 ZNF589Q86UQ0 364 aaPredicted RBP20.55■□□□□ 0.88
TNFSF13-205ENST00000396545 MCM9Q9NXL9 1143 aa20.55■□□□□ 0.88
TNFSF13-205ENST00000396545 CCNA1P78396 465 aa20.55■□□□□ 0.88
TNFSF13-205ENST00000396545 CREB3L3Q68CJ9 461 aa20.55■□□□□ 0.88
TNFSF13-205ENST00000396545 CLEC17AQ6ZS10 378 aa20.55■□□□□ 0.88
TNFSF13-205ENST00000396545 LCORLQ8N3X6 602 aa20.55■□□□□ 0.88
TNFSF13-205ENST00000396545 TNPO1Q92973 898 aaKnown RBP20.55■□□□□ 0.88
TNFSF13-205ENST00000396545 INTS4Q96HW7 963 aaKnown RBP20.55■□□□□ 0.88
TNFSF13-205ENST00000396545 DSCC1Q9BVC3 393 aa20.55■□□□□ 0.88
TNFSF13-205ENST00000396545 DCP1AQ9NPI6 582 aaPredicted RBP20.55■□□□□ 0.88
TNFSF13-205ENST00000396545 U3KPZ7 1027 aaPredicted RBP20.55■□□□□ 0.88
TNFSF13-205ENST00000396545 DNAH12Q6ZR08 3092 aa20.54■□□□□ 0.88
TNFSF13-205ENST00000396545 SEPT2Q15019 361 aa20.54■□□□□ 0.88
TNFSF13-205ENST00000396545 SDR42E1Q8WUS8 393 aa20.54■□□□□ 0.88
TNFSF13-205ENST00000396545 C11orf49Q9H6J7 331 aa20.54■□□□□ 0.88
TNFSF13-205ENST00000396545 ZSWIM6Q9HCJ5 1215 aa20.54■□□□□ 0.88
TNFSF13-205ENST00000396545 SPDYE16A6NNV3 312 aaPredicted RBP20.53■□□□□ 0.88
TNFSF13-205ENST00000396545 SLC27A2O14975 620 aa20.53■□□□□ 0.88
TNFSF13-205ENST00000396545 NUCB2P80303 420 aa20.53■□□□□ 0.88
TNFSF13-205ENST00000396545 MAP2K5Q13163 448 aa20.53■□□□□ 0.88
TNFSF13-205ENST00000396545 TSGA10IPQ3SY00 556 aa20.53■□□□□ 0.88
TNFSF13-205ENST00000396545 C7orf61Q8IZ16 206 aa20.53■□□□□ 0.88
TNFSF13-205ENST00000396545 RPAP3Q9H6T3 665 aaPredicted RBP20.53■□□□□ 0.88
TNFSF13-205ENST00000396545 BTBD7Q9P203 1132 aa20.53■□□□□ 0.88
TNFSF13-205ENST00000396545 CCND3P30281 292 aaPredicted RBP20.52■□□□□ 0.88
TNFSF13-205ENST00000396545 PFASO15067 1338 aa20.52■□□□□ 0.88
TNFSF13-205ENST00000396545 A0A1W2PRG0 241 aa20.51■□□□□ 0.87
TNFSF13-205ENST00000396545 CYP2D6P10635 497 aa20.51■□□□□ 0.87
TNFSF13-205ENST00000396545 LHX8Q68G74 356 aa20.51■□□□□ 0.87
TNFSF13-205ENST00000396545 OSBP2Q969R2 916 aa20.51■□□□□ 0.87
TNFSF13-205ENST00000396545 MYH7P12883 1935 aa20.51■□□□□ 0.87
TNFSF13-205ENST00000396545 SLC15A5A6NIM6 579 aa20.51■□□□□ 0.87
TNFSF13-205ENST00000396545 MPHOSPH10O00566 681 aaKnown RBP20.51■□□□□ 0.87
TNFSF13-205ENST00000396545 COL6A1P12109 1028 aa20.51■□□□□ 0.87
TNFSF13-205ENST00000396545 PTPREP23469 700 aa20.51■□□□□ 0.87
TNFSF13-205ENST00000396545 ADCK5Q3MIX3 580 aa20.51■□□□□ 0.87
TNFSF13-205ENST00000396545 VPS53Q5VIR6 699 aa20.51■□□□□ 0.87
TNFSF13-205ENST00000396545 SLC44A5Q8NCS7 719 aa20.51■□□□□ 0.87
TNFSF13-205ENST00000396545 SEC62Q99442 399 aaKnown RBP20.51■□□□□ 0.87
TNFSF13-205ENST00000396545 GDF15Q99988 308 aa20.51■□□□□ 0.87
TNFSF13-205ENST00000396545 ARMT1Q9H993 441 aa20.51■□□□□ 0.87
TNFSF13-205ENST00000396545 DDX11L8A8MPP1 907 aa20.5■□□□□ 0.87
TNFSF13-205ENST00000396545 HOXC6P09630 235 aa20.5■□□□□ 0.87
TNFSF13-205ENST00000396545 CASTP20810 708 aaKnown RBP20.5■□□□□ 0.87
TNFSF13-205ENST00000396545 GRB14Q14449 540 aa20.5■□□□□ 0.87
TNFSF13-205ENST00000396545 WDR78Q5VTH9 848 aa20.5■□□□□ 0.87
TNFSF13-205ENST00000396545 JAKMIP1Q96N16 626 aaKnown RBP20.5■□□□□ 0.87
TNFSF13-205ENST00000396545 GBP4Q96PP9 640 aa20.5■□□□□ 0.87
TNFSF13-205ENST00000396545 FLRT1Q9NZU1 646 aa20.5■□□□□ 0.87
TNFSF13-205ENST00000396545 SWAP70Q9UH65 585 aa20.5■□□□□ 0.87
TNFSF13-205ENST00000396545 CTNNA3Q9UI47 895 aa20.5■□□□□ 0.87
TNFSF13-205ENST00000396545 ZMYND8Q9ULU4 1186 aaPredicted RBP20.5■□□□□ 0.87
TNFSF13-205ENST00000396545 MBD4O95243 580 aa20.49■□□□□ 0.87
TNFSF13-205ENST00000396545 CHGBP05060 677 aa20.49■□□□□ 0.87
TNFSF13-205ENST00000396545 BMP8BP34820 402 aa20.49■□□□□ 0.87
TNFSF13-205ENST00000396545 DEKP35659 375 aaKnown RBP20.49■□□□□ 0.87
TNFSF13-205ENST00000396545 AK2P54819 239 aa20.49■□□□□ 0.87
TNFSF13-205ENST00000396545 KRT32Q14532 448 aa20.49■□□□□ 0.87
TNFSF13-205ENST00000396545 SLFNL1Q499Z3 407 aa20.49■□□□□ 0.87
TNFSF13-205ENST00000396545 TMEM179Q6ZVK1 233 aa20.49■□□□□ 0.87
TNFSF13-205ENST00000396545 COL6A3P12111 3177 aa20.48■□□□□ 0.87
TNFSF13-205ENST00000396545 RLFQ13129 1914 aa20.48■□□□□ 0.87
TNFSF13-205ENST00000396545 A0A0G2JMZ2 1700 aa20.48■□□□□ 0.87
TNFSF13-205ENST00000396545 SOX1O00570 391 aaPredicted RBP20.48■□□□□ 0.87
TNFSF13-205ENST00000396545 PRKAB2O43741 272 aa20.48■□□□□ 0.87
TNFSF13-205ENST00000396545 RUFY3Q7L099 469 aa20.48■□□□□ 0.87
TNFSF13-205ENST00000396545 DYNLL2Q96FJ2 89 aa20.48■□□□□ 0.87
TNFSF13-205ENST00000396545 ATP8A2Q9NTI2 1148 aa20.48■□□□□ 0.87
TNFSF13-205ENST00000396545 CYP46A1Q9Y6A2 500 aa20.48■□□□□ 0.87
TNFSF13-205ENST00000396545 IVNS1ABPQ9Y6Y0 642 aa20.48■□□□□ 0.87
TNFSF13-205ENST00000396545 FRMPD3Q5JV73 1810 aa20.47■□□□□ 0.87
TNFSF13-205ENST00000396545 M0R2C6 588 aa20.47■□□□□ 0.87
TNFSF13-205ENST00000396545 IGHA2P01877 340 aa20.47■□□□□ 0.87
TNFSF13-205ENST00000396545 HSPD1P10809 573 aaKnown RBP20.47■□□□□ 0.87
TNFSF13-205ENST00000396545 PSMA5P28066 241 aa20.47■□□□□ 0.87
TNFSF13-205ENST00000396545 COG2Q14746 738 aa20.47■□□□□ 0.87
TNFSF13-205ENST00000396545 KIAA1755Q5JYT7 1200 aa20.47■□□□□ 0.87
TNFSF13-205ENST00000396545 MFSD14CQ5VZR4 134 aa20.47■□□□□ 0.87
TNFSF13-205ENST00000396545 HOXC10Q9NYD6 342 aa20.47■□□□□ 0.87
TNFSF13-205ENST00000396545 LIMCH1Q9UPQ0 1083 aa20.47■□□□□ 0.87
TNFSF13-205ENST00000396545 ZNF236Q9UL36 1845 aa20.47■□□□□ 0.87
TNFSF13-205ENST00000396545 BAZ2AQ9UIF9 1905 aaKnown RBP20.47■□□□□ 0.87
TNFSF13-205ENST00000396545 GPAA1O43292 621 aa20.46■□□□□ 0.87
TNFSF13-205ENST00000396545 GNAT2P19087 354 aa20.46■□□□□ 0.87
TNFSF13-205ENST00000396545 CCDC129Q6ZRS4 1044 aa20.46■□□□□ 0.87
TNFSF13-205ENST00000396545 SIAH1Q8IUQ4 282 aa20.46■□□□□ 0.87
TNFSF13-205ENST00000396545 MOV10L1Q9BXT6 1211 aaKnown RBP20.46■□□□□ 0.87
TNFSF13-205ENST00000396545 TANGO6Q9C0B7 1094 aa20.46■□□□□ 0.87
TNFSF13-205ENST00000396545 PUS7LQ9H0K6 701 aaKnown RBP20.46■□□□□ 0.87
TNFSF13-205ENST00000396545 ALDH8A1Q9H2A2 487 aaPredicted RBP20.46■□□□□ 0.87
TNFSF13-205ENST00000396545 PDRG1Q9NUG6 133 aa20.46■□□□□ 0.87
TNFSF13-205ENST00000396545 MYH8P13535 1937 aa20.46■□□□□ 0.87
TNFSF13-205ENST00000396545 SYN1P17600 705 aa20.46■□□□□ 0.87
TNFSF13-205ENST00000396545 CLEC10AQ8IUN9 316 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms